RNA–Protein interactions for RNA: ENST00000431803.2

CDC42-IT1-201, CDC42 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDC42-IT1, Length 692 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-IT1-201ENST00000431803 C8orf34Q49A92 452 aa10.38□□□□□ -0.75
CDC42-IT1-201ENST00000431803 RTP2Q5QGT7 225 aa10.38□□□□□ -0.75
CDC42-IT1-201ENST00000431803 LILRA6Q6PI73 481 aa10.38□□□□□ -0.75
CDC42-IT1-201ENST00000431803 ELMSAN1Q6PJG2 1045 aa10.38□□□□□ -0.75
CDC42-IT1-201ENST00000431803 FAM184AQ8NB25 1140 aa10.38□□□□□ -0.75
CDC42-IT1-201ENST00000431803 DEPTORQ8TB45 409 aa10.38□□□□□ -0.75
CDC42-IT1-201ENST00000431803 RABGGTAQ92696 567 aa10.38□□□□□ -0.75
CDC42-IT1-201ENST00000431803 ZNF707Q96C28 371 aaPredicted RBP10.38□□□□□ -0.75
CDC42-IT1-201ENST00000431803 KIFC3Q9BVG8 833 aa10.38□□□□□ -0.75
CDC42-IT1-201ENST00000431803 REPIN1Q9BWE0 567 aaKnown RBP10.38□□□□□ -0.75
CDC42-IT1-201ENST00000431803 SLC6A16Q9GZN6 736 aa10.38□□□□□ -0.75
CDC42-IT1-201ENST00000431803 CXCL16Q9H2A7 254 aa10.38□□□□□ -0.75
CDC42-IT1-201ENST00000431803 PLEKHA4Q9H4M7 779 aa10.38□□□□□ -0.75
CDC42-IT1-201ENST00000431803 WDR6Q9NNW5 1121 aaKnown RBP10.38□□□□□ -0.75
CDC42-IT1-201ENST00000431803 CACNG4Q9UBN1 327 aa10.38□□□□□ -0.75
CDC42-IT1-201ENST00000431803 PARP2Q9UGN5 583 aa10.38□□□□□ -0.75
CDC42-IT1-201ENST00000431803 NOL7Q9UMY1 257 aaKnown RBP10.38□□□□□ -0.75
CDC42-IT1-201ENST00000431803 USP20Q9Y2K6 914 aa10.38□□□□□ -0.75
CDC42-IT1-201ENST00000431803 CLUHO75153 1309 aa10.37□□□□□ -0.75
CDC42-IT1-201ENST00000431803 KIF4AO95239 1232 aa10.37□□□□□ -0.75
CDC42-IT1-201ENST00000431803 CCT6AP40227 531 aaKnown RBP10.37□□□□□ -0.75
CDC42-IT1-201ENST00000431803 TDGQ13569 410 aa10.37□□□□□ -0.75
CDC42-IT1-201ENST00000431803 GNL2Q13823 731 aaKnown RBP10.37□□□□□ -0.75
CDC42-IT1-201ENST00000431803 DCAF4L1Q3SXM0 396 aa10.37□□□□□ -0.75
CDC42-IT1-201ENST00000431803 EEF1DP3Q658K8 133 aa10.37□□□□□ -0.75
CDC42-IT1-201ENST00000431803 TMEM105Q8N8V8 129 aa10.37□□□□□ -0.75
CDC42-IT1-201ENST00000431803 RIN2Q8WYP3 895 aaPredicted RBP10.37□□□□□ -0.75
CDC42-IT1-201ENST00000431803 KIFAP3Q92845 792 aa10.37□□□□□ -0.75
CDC42-IT1-201ENST00000431803 ADPGKQ9BRR6 497 aa10.37□□□□□ -0.75
CDC42-IT1-201ENST00000431803 BHMT2Q9H2M3 363 aa10.37□□□□□ -0.75
CDC42-IT1-201ENST00000431803 KCNK12Q9HB15 430 aa10.37□□□□□ -0.75
CDC42-IT1-201ENST00000431803 ZDHHC7Q9NXF8 308 aa10.37□□□□□ -0.75
CDC42-IT1-201ENST00000431803 SNTG2Q9NY99 539 aa10.37□□□□□ -0.75
CDC42-IT1-201ENST00000431803 EPS15L1Q9UBC2 864 aa10.37□□□□□ -0.75
CDC42-IT1-201ENST00000431803 LRWD1Q9UFC0 647 aa10.37□□□□□ -0.75
CDC42-IT1-201ENST00000431803 DUSP12Q9UNI6 340 aa10.37□□□□□ -0.75
CDC42-IT1-201ENST00000431803 KIAA1024Q9UPX6 916 aa10.37□□□□□ -0.75
CDC42-IT1-201ENST00000431803 PCDHB6Q9Y5E3 794 aa10.37□□□□□ -0.75
CDC42-IT1-201ENST00000431803 CASTOR2A6NHX0 329 aa10.36□□□□□ -0.75
CDC42-IT1-201ENST00000431803 LAD1O00515 517 aa10.36□□□□□ -0.75
CDC42-IT1-201ENST00000431803 TADA2AO75478 443 aa10.36□□□□□ -0.75
CDC42-IT1-201ENST00000431803 THP07101 528 aa10.36□□□□□ -0.75
CDC42-IT1-201ENST00000431803 SPATA31D3P0C874 917 aa10.36□□□□□ -0.75
CDC42-IT1-201ENST00000431803 RPL17P18621 184 aaKnown RBP10.36□□□□□ -0.75
CDC42-IT1-201ENST00000431803 IL17AQ16552 155 aa10.36□□□□□ -0.75
CDC42-IT1-201ENST00000431803 NT5DC1Q5TFE4 455 aa10.36□□□□□ -0.75
CDC42-IT1-201ENST00000431803 PRSS55Q6UWB4 352 aaPredicted RBP10.36□□□□□ -0.75
CDC42-IT1-201ENST00000431803 SPATA31D4Q6ZUB0 917 aa10.36□□□□□ -0.75
CDC42-IT1-201ENST00000431803 PALB2Q86YC2 1186 aa10.36□□□□□ -0.75
CDC42-IT1-201ENST00000431803 DAW1Q8N136 415 aa10.36□□□□□ -0.75
CDC42-IT1-201ENST00000431803 SNX29Q8TEQ0 813 aa10.36□□□□□ -0.75
CDC42-IT1-201ENST00000431803 HASPINQ8TF76 798 aa10.36□□□□□ -0.75
CDC42-IT1-201ENST00000431803 PIK3R5Q8WYR1 880 aa10.36□□□□□ -0.75
CDC42-IT1-201ENST00000431803 SMG7Q92540 1137 aaKnown RBP10.36□□□□□ -0.75
CDC42-IT1-201ENST00000431803 STAMQ92783 540 aa10.36□□□□□ -0.75
CDC42-IT1-201ENST00000431803 IFT74Q96LB3 600 aa10.36□□□□□ -0.75
CDC42-IT1-201ENST00000431803 TTPALQ9BTX7 342 aa10.36□□□□□ -0.75
CDC42-IT1-201ENST00000431803 RAB34Q9BZG1 259 aa10.36□□□□□ -0.75
CDC42-IT1-201ENST00000431803 NT5C3AQ9H0P0 336 aa10.36□□□□□ -0.75
CDC42-IT1-201ENST00000431803 DDX19AQ9NUU7 478 aaKnown RBP10.36□□□□□ -0.75
CDC42-IT1-201ENST00000431803 IGSF9Q9P2J2 1179 aa10.36□□□□□ -0.75
CDC42-IT1-201ENST00000431803 DOCK8Q8NF50 2099 aa10.36□□□□□ -0.75
CDC42-IT1-201ENST00000431803 MTCL1Q9Y4B5 1905 aaKnown RBP10.36□□□□□ -0.75
CDC42-IT1-201ENST00000431803 PHLPP2Q6ZVD8 1323 aa10.35□□□□□ -0.75
CDC42-IT1-201ENST00000431803 PP2D1A8MPX8 630 aa10.35□□□□□ -0.75
CDC42-IT1-201ENST00000431803 TMEM189-UBE2V1I3L0A0 370 aa10.35□□□□□ -0.75
CDC42-IT1-201ENST00000431803 MYBP10242 640 aa10.35□□□□□ -0.75
CDC42-IT1-201ENST00000431803 LIG1P18858 919 aa10.35□□□□□ -0.75
CDC42-IT1-201ENST00000431803 PRPHP41219 470 aa10.35□□□□□ -0.75
CDC42-IT1-201ENST00000431803 NPTX2P47972 431 aa10.35□□□□□ -0.75
CDC42-IT1-201ENST00000431803 CLCN5P51795 746 aa10.35□□□□□ -0.75
CDC42-IT1-201ENST00000431803 ELAVL2Q12926 359 aaKnown RBP10.35□□□□□ -0.75
CDC42-IT1-201ENST00000431803 TMEM132AQ24JP5 1023 aa10.35□□□□□ -0.75
CDC42-IT1-201ENST00000431803 ATF7IP2Q5U623 682 aa10.35□□□□□ -0.75
CDC42-IT1-201ENST00000431803 FAM171A1Q5VUB5 890 aa10.35□□□□□ -0.75
CDC42-IT1-201ENST00000431803 CWF19L1Q69YN2 538 aaKnown RBP10.35□□□□□ -0.75
CDC42-IT1-201ENST00000431803 GLYCTKQ8IVS8 523 aa10.35□□□□□ -0.75
CDC42-IT1-201ENST00000431803 LNX1Q8TBB1 728 aaPredicted RBP10.35□□□□□ -0.75
CDC42-IT1-201ENST00000431803 THAP11Q96EK4 314 aa10.35□□□□□ -0.75
CDC42-IT1-201ENST00000431803 PPP1R10Q96QC0 940 aaKnown RBP10.35□□□□□ -0.75
CDC42-IT1-201ENST00000431803 MYADMQ96S97 322 aa10.35□□□□□ -0.75
CDC42-IT1-201ENST00000431803 CLSTN3Q9BQT9 956 aa10.35□□□□□ -0.75
CDC42-IT1-201ENST00000431803 MMTAG2Q9BU76 263 aaKnown RBP10.35□□□□□ -0.75
CDC42-IT1-201ENST00000431803 IRF2BPLQ9H1B7 796 aa10.35□□□□□ -0.75
CDC42-IT1-201ENST00000431803 POLD4Q9HCU8 107 aa10.35□□□□□ -0.75
CDC42-IT1-201ENST00000431803 PTPRHQ9HD43 1115 aa10.35□□□□□ -0.75
CDC42-IT1-201ENST00000431803 ARHGAP28Q9P2N2 729 aa10.35□□□□□ -0.75
CDC42-IT1-201ENST00000431803 FBXW11Q9UKB1 542 aa10.35□□□□□ -0.75
CDC42-IT1-201ENST00000431803 TNFSF13BQ9Y275 285 aa10.35□□□□□ -0.75
CDC42-IT1-201ENST00000431803 GDAQ9Y2T3 454 aa10.35□□□□□ -0.75
CDC42-IT1-201ENST00000431803 VWA8A3KMH1 1905 aa10.35□□□□□ -0.75
CDC42-IT1-201ENST00000431803 E9PMD0 336 aa10.34□□□□□ -0.75
CDC42-IT1-201ENST00000431803 NPR3P17342 541 aa10.34□□□□□ -0.75
CDC42-IT1-201ENST00000431803 GBP2P32456 591 aaPredicted RBP10.34□□□□□ -0.75
CDC42-IT1-201ENST00000431803 MAPK7Q13164 816 aa10.34□□□□□ -0.75
CDC42-IT1-201ENST00000431803 RABEP1Q15276 862 aa10.34□□□□□ -0.75
CDC42-IT1-201ENST00000431803 PSMD5Q16401 504 aa10.34□□□□□ -0.75
CDC42-IT1-201ENST00000431803 UPP1Q16831 310 aa10.34□□□□□ -0.75
CDC42-IT1-201ENST00000431803 XKR4Q5GH76 650 aa10.34□□□□□ -0.75
CDC42-IT1-201ENST00000431803 GLRA4Q5JXX5 417 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms