RNA–Protein interactions for RNA: ENST00000431547.1

RFTN1-202, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 5

Gene RFTN1, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-202ENST00000431547 TSG101Q99816 390 aa20.01■□□□□ 0.79
RFTN1-202ENST00000431547 C2CD2Q9Y426 696 aa20.01■□□□□ 0.79
RFTN1-202ENST00000431547 FNDC1Q4ZHG4 1894 aaPredicted RBP20.01■□□□□ 0.79
RFTN1-202ENST00000431547 FGF18O76093 207 aa20■□□□□ 0.79
RFTN1-202ENST00000431547 CYP3A5P20815 502 aa20■□□□□ 0.79
RFTN1-202ENST00000431547 NR2F2P24468 414 aa20■□□□□ 0.79
RFTN1-202ENST00000431547 OR1G1P47890 313 aa20■□□□□ 0.79
RFTN1-202ENST00000431547 SPAG1Q07617 926 aa20■□□□□ 0.79
RFTN1-202ENST00000431547 ADAM9Q13443 819 aa20■□□□□ 0.79
RFTN1-202ENST00000431547 SURF1Q15526 300 aa20■□□□□ 0.79
RFTN1-202ENST00000431547 ANKRD40Q6AI12 368 aa20■□□□□ 0.79
RFTN1-202ENST00000431547 JADE1Q6IE81 842 aa20■□□□□ 0.79
RFTN1-202ENST00000431547 NT5DC4Q86YG4 428 aa20■□□□□ 0.79
RFTN1-202ENST00000431547 KIF12Q96FN5 646 aa20■□□□□ 0.79
RFTN1-202ENST00000431547 DDX27Q96GQ7 796 aaKnown RBP20■□□□□ 0.79
RFTN1-202ENST00000431547 IGSF21Q96ID5 467 aa20■□□□□ 0.79
RFTN1-202ENST00000431547 MFSD14AQ96MC6 490 aa20■□□□□ 0.79
RFTN1-202ENST00000431547 FAM161BQ96MY7 647 aa20■□□□□ 0.79
RFTN1-202ENST00000431547 COLEC11Q9BWP8 271 aa20■□□□□ 0.79
RFTN1-202ENST00000431547 PRDM12Q9H4Q4 367 aa20■□□□□ 0.79
RFTN1-202ENST00000431547 TMEM63CQ9P1W3 806 aa20■□□□□ 0.79
RFTN1-202ENST00000431547 UBQLN1Q9UMX0 589 aaKnown RBP20■□□□□ 0.79
RFTN1-202ENST00000431547 GBF1Q92538 1859 aa20■□□□□ 0.79
RFTN1-202ENST00000431547 NT5C1B-RDH14C9J2C7 533 aa19.99■□□□□ 0.79
RFTN1-202ENST00000431547 MAPK13O15264 365 aa19.99■□□□□ 0.79
RFTN1-202ENST00000431547 XPOTO43592 962 aaKnown RBP19.99■□□□□ 0.79
RFTN1-202ENST00000431547 ITGB1P05556 798 aa19.99■□□□□ 0.79
RFTN1-202ENST00000431547 RPL9P32969 192 aaKnown RBP19.99■□□□□ 0.79
RFTN1-202ENST00000431547 PMS1P54277 932 aaKnown RBP19.99■□□□□ 0.79
RFTN1-202ENST00000431547 NLRP12P59046 1061 aa19.99■□□□□ 0.79
RFTN1-202ENST00000431547 KRT17Q04695 432 aa19.99■□□□□ 0.79
RFTN1-202ENST00000431547 UBE3AQ05086 875 aa19.99■□□□□ 0.79
RFTN1-202ENST00000431547 SOX4Q06945 474 aaPredicted RBP19.99■□□□□ 0.79
RFTN1-202ENST00000431547 TMEM132DQ14C87 1099 aa19.99■□□□□ 0.79
RFTN1-202ENST00000431547 SPPL3Q8TCT6 385 aa19.99■□□□□ 0.79
RFTN1-202ENST00000431547 SYAP1Q96A49 352 aaPredicted RBP19.99■□□□□ 0.79
RFTN1-202ENST00000431547 C18orf25Q96B23 403 aaPredicted RBP19.99■□□□□ 0.79
RFTN1-202ENST00000431547 PDE11AQ9HCR9 933 aa19.99■□□□□ 0.79
RFTN1-202ENST00000431547 MTMR10Q9NXD2 777 aa19.99■□□□□ 0.79
RFTN1-202ENST00000431547 LZTS1Q9Y250 596 aa19.99■□□□□ 0.79
RFTN1-202ENST00000431547 FRMD4BQ9Y2L6 1034 aa19.99■□□□□ 0.79
RFTN1-202ENST00000431547 CASTOR2A6NHX0 329 aa19.98■□□□□ 0.79
RFTN1-202ENST00000431547 RFXAPO00287 272 aa19.98■□□□□ 0.79
RFTN1-202ENST00000431547 LPXNO60711 386 aa19.98■□□□□ 0.79
RFTN1-202ENST00000431547 NFICP08651 508 aa19.98■□□□□ 0.79
RFTN1-202ENST00000431547 CASP4P49662 377 aa19.98■□□□□ 0.79
RFTN1-202ENST00000431547 WNT7BP56706 349 aa19.98■□□□□ 0.79
RFTN1-202ENST00000431547 FKBP3Q00688 224 aaKnown RBP19.98■□□□□ 0.79
RFTN1-202ENST00000431547 CYP24A1Q07973 514 aa19.98■□□□□ 0.79
RFTN1-202ENST00000431547 PSMD6Q15008 389 aa19.98■□□□□ 0.79
RFTN1-202ENST00000431547 UPP1Q16831 310 aa19.98■□□□□ 0.79
RFTN1-202ENST00000431547 SKOR2Q2VWA4 1001 aaPredicted RBP19.98■□□□□ 0.79
RFTN1-202ENST00000431547 SPATA1Q5VX52 437 aa19.98■□□□□ 0.79
RFTN1-202ENST00000431547 KLHL10Q6JEL2 608 aa19.98■□□□□ 0.79
RFTN1-202ENST00000431547 DCLRE1AQ6PJP8 1040 aa19.98■□□□□ 0.79
RFTN1-202ENST00000431547 TMEM173Q86WV6 379 aaPredicted RBP19.98■□□□□ 0.79
RFTN1-202ENST00000431547 ZC3H3Q8IXZ2 948 aaKnown RBP19.98■□□□□ 0.79
RFTN1-202ENST00000431547 NELFBQ8WX92 580 aa19.98■□□□□ 0.79
RFTN1-202ENST00000431547 TMEM169Q96HH4 297 aa19.98■□□□□ 0.79
RFTN1-202ENST00000431547 PAAF1Q9BRP4 392 aa19.98■□□□□ 0.79
RFTN1-202ENST00000431547 LMAN2LQ9H0V9 348 aa19.98■□□□□ 0.79
RFTN1-202ENST00000431547 ALG13Q9NP73 1137 aaKnown RBP19.98■□□□□ 0.79
RFTN1-202ENST00000431547 MARCH5Q9NX47 278 aa19.98■□□□□ 0.79
RFTN1-202ENST00000431547 PRG3Q9Y2Y8 225 aaPredicted RBP19.98■□□□□ 0.79
RFTN1-202ENST00000431547 LAMA2P24043 3122 aaKnown RBP19.98■□□□□ 0.79
RFTN1-202ENST00000431547 BICDL2A1A5D9 508 aa19.97■□□□□ 0.79
RFTN1-202ENST00000431547 CETN3O15182 167 aa19.97■□□□□ 0.79
RFTN1-202ENST00000431547 GRM6O15303 877 aa19.97■□□□□ 0.79
RFTN1-202ENST00000431547 POU3F3P20264 500 aaPredicted RBP19.97■□□□□ 0.79
RFTN1-202ENST00000431547 LRPAP1P30533 357 aa19.97■□□□□ 0.79
RFTN1-202ENST00000431547 CLCNKBP51801 687 aa19.97■□□□□ 0.79
RFTN1-202ENST00000431547 PAK1Q13153 545 aa19.97■□□□□ 0.79
RFTN1-202ENST00000431547 CEP135Q66GS9 1140 aa19.97■□□□□ 0.79
RFTN1-202ENST00000431547 TTI2Q6NXR4 508 aa19.97■□□□□ 0.79
RFTN1-202ENST00000431547 CAVIN1Q6NZI2 390 aaKnown RBP19.97■□□□□ 0.79
RFTN1-202ENST00000431547 DDX53Q86TM3 631 aaKnown RBP19.97■□□□□ 0.79
RFTN1-202ENST00000431547 EFCAB13Q8IY85 973 aa19.97■□□□□ 0.79
RFTN1-202ENST00000431547 BEST2Q8NFU1 509 aa19.97■□□□□ 0.79
RFTN1-202ENST00000431547 GDPD5Q8WTR4 605 aa19.97■□□□□ 0.79
RFTN1-202ENST00000431547 CACTINQ8WUQ7 758 aaKnown RBP19.97■□□□□ 0.79
RFTN1-202ENST00000431547 BCL7CQ8WUZ0 217 aaPredicted RBP19.97■□□□□ 0.79
RFTN1-202ENST00000431547 CDX2Q99626 313 aaPredicted RBP19.97■□□□□ 0.79
RFTN1-202ENST00000431547 GOLGA2P5Q9HBQ8 144 aa19.97■□□□□ 0.79
RFTN1-202ENST00000431547 CACNG4Q9UBN1 327 aa19.97■□□□□ 0.79
RFTN1-202ENST00000431547 STK39Q9UEW8 545 aa19.97■□□□□ 0.79
RFTN1-202ENST00000431547 TUBGCP4Q9UGJ1 667 aa19.97■□□□□ 0.79
RFTN1-202ENST00000431547 PUF60Q9UHX1 559 aaKnown RBP19.97■□□□□ 0.79
RFTN1-202ENST00000431547 CHD9Q3L8U1 2897 aa19.96■□□□□ 0.79
RFTN1-202ENST00000431547 TRIM49BA6NDI0 452 aa19.96■□□□□ 0.79
RFTN1-202ENST00000431547 TMEM189-UBE2V1I3L0A0 370 aa19.96■□□□□ 0.79
RFTN1-202ENST00000431547 AKAP3O75969 853 aa19.96■□□□□ 0.79
RFTN1-202ENST00000431547 EFEMP2O95967 443 aa19.96■□□□□ 0.79
RFTN1-202ENST00000431547 PSMC2P35998 433 aaKnown RBP19.96■□□□□ 0.79
RFTN1-202ENST00000431547 CT47A1Q5JQC4 288 aaPredicted RBP19.96■□□□□ 0.79
RFTN1-202ENST00000431547 RABGGTAQ92696 567 aa19.96■□□□□ 0.79
RFTN1-202ENST00000431547 GUCD1Q96NT3 240 aa19.96■□□□□ 0.79
RFTN1-202ENST00000431547 DUSP9Q99956 384 aaKnown RBP19.96■□□□□ 0.79
RFTN1-202ENST00000431547 MKNK1Q9BUB5 465 aa19.96■□□□□ 0.79
RFTN1-202ENST00000431547 LMCD1Q9NZU5 365 aa19.96■□□□□ 0.79
RFTN1-202ENST00000431547 DACH1Q9UI36 760 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms