RNA–Protein interactions for RNA: ENST00000430711.5

COL28A1-202, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 5

Gene COL28A1, Length 2,323 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-202ENST00000430711 MASTLQ96GX5 879 aa7.68□□□□□ -1.18
COL28A1-202ENST00000430711 MXRA8Q9BRK3 442 aa7.68□□□□□ -1.18
COL28A1-202ENST00000430711 TEKT3Q9BXF9 490 aa7.68□□□□□ -1.18
COL28A1-202ENST00000430711 INTS9Q9NV88 658 aaKnown RBP7.68□□□□□ -1.18
COL28A1-202ENST00000430711 MCM8Q9UJA3 840 aa7.68□□□□□ -1.18
COL28A1-202ENST00000430711 SLC12A4Q9UP95 1085 aa7.68□□□□□ -1.18
COL28A1-202ENST00000430711 TMX2Q9Y320 296 aa7.68□□□□□ -1.18
COL28A1-202ENST00000430711 KIAA1217Q5T5P2 1943 aa7.68□□□□□ -1.18
COL28A1-202ENST00000430711 ATP8B3O60423 1300 aa7.68□□□□□ -1.18
COL28A1-202ENST00000430711 TTLL13PA6NNM8 815 aa7.68□□□□□ -1.18
COL28A1-202ENST00000430711 PI4K2BG5E9Z4 385 aa7.68□□□□□ -1.18
COL28A1-202ENST00000430711 ZNF862O60290 1169 aa7.68□□□□□ -1.18
COL28A1-202ENST00000430711 RTN2O75298 545 aa7.68□□□□□ -1.18
COL28A1-202ENST00000430711 ATP6V1G2O95670 118 aa7.68□□□□□ -1.18
COL28A1-202ENST00000430711 RPSAP08865 295 aaKnown RBP7.68□□□□□ -1.18
COL28A1-202ENST00000430711 PDE6BP35913 854 aa7.68□□□□□ -1.18
COL28A1-202ENST00000430711 ITGA8P53708 1063 aa7.68□□□□□ -1.18
COL28A1-202ENST00000430711 NRLP54845 237 aa7.68□□□□□ -1.18
COL28A1-202ENST00000430711 IRX3P78415 501 aaPredicted RBP7.68□□□□□ -1.18
COL28A1-202ENST00000430711 XRCC4Q13426 336 aa7.68□□□□□ -1.18
COL28A1-202ENST00000430711 PPP1R7Q15435 360 aa7.68□□□□□ -1.18
COL28A1-202ENST00000430711 SNRNP35Q16560 246 aaKnown RBP7.68□□□□□ -1.18
COL28A1-202ENST00000430711 TKFCQ3LXA3 575 aa7.68□□□□□ -1.18
COL28A1-202ENST00000430711 FAM102BQ5T8I3 360 aa7.68□□□□□ -1.18
COL28A1-202ENST00000430711 ANO5Q75V66 913 aa7.68□□□□□ -1.18
COL28A1-202ENST00000430711 MIER3Q7Z3K6 550 aa7.68□□□□□ -1.18
COL28A1-202ENST00000430711 SLC9A9Q8IVB4 645 aa7.68□□□□□ -1.18
COL28A1-202ENST00000430711 TAB3Q8N5C8 712 aaPredicted RBP7.68□□□□□ -1.18
COL28A1-202ENST00000430711 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.68□□□□□ -1.18
COL28A1-202ENST00000430711 SHC3Q92529 594 aa7.68□□□□□ -1.18
COL28A1-202ENST00000430711 MRRFQ96E11 262 aaKnown RBP7.68□□□□□ -1.18
COL28A1-202ENST00000430711 SGSM3Q96HU1 749 aa7.68□□□□□ -1.18
COL28A1-202ENST00000430711 GLT8D2Q9H1C3 349 aa7.68□□□□□ -1.18
COL28A1-202ENST00000430711 VEZTQ9HBM0 779 aa7.68□□□□□ -1.18
COL28A1-202ENST00000430711 ARHGEF10LQ9HCE6 1279 aa7.68□□□□□ -1.18
COL28A1-202ENST00000430711 RAVER2Q9HCJ3 691 aaKnown RBP7.68□□□□□ -1.18
COL28A1-202ENST00000430711 RIPK3Q9Y572 518 aa7.68□□□□□ -1.18
COL28A1-202ENST00000430711 ARID2Q68CP9 1835 aa7.67□□□□□ -1.18
COL28A1-202ENST00000430711 MYPNQ86TC9 1320 aa7.67□□□□□ -1.18
COL28A1-202ENST00000430711 SYNGAP1Q96PV0 1343 aa7.67□□□□□ -1.18
COL28A1-202ENST00000430711 FAM187AA6NFU0 413 aa7.67□□□□□ -1.18
COL28A1-202ENST00000430711 RASGRF2O14827 1237 aa7.67□□□□□ -1.18
COL28A1-202ENST00000430711 SKAP2O75563 359 aaPredicted RBP7.67□□□□□ -1.18
COL28A1-202ENST00000430711 CYP1A2P05177 515 aa7.67□□□□□ -1.18
COL28A1-202ENST00000430711 KRT16P08779 473 aa7.67□□□□□ -1.18
COL28A1-202ENST00000430711 CLTAP09496 248 aa7.67□□□□□ -1.18
COL28A1-202ENST00000430711 KRT10P13645 584 aa7.67□□□□□ -1.18
COL28A1-202ENST00000430711 CD58P19256 250 aa7.67□□□□□ -1.18
COL28A1-202ENST00000430711 ANXA13P27216 316 aa7.67□□□□□ -1.18
COL28A1-202ENST00000430711 GCAP28676 217 aa7.67□□□□□ -1.18
COL28A1-202ENST00000430711 YWHABP31946 246 aaKnown RBP7.67□□□□□ -1.18
COL28A1-202ENST00000430711 CHRNA3P32297 505 aa7.67□□□□□ -1.18
COL28A1-202ENST00000430711 ALDH5A1P51649 535 aaPredicted RBP7.67□□□□□ -1.18
COL28A1-202ENST00000430711 HADHBP55084 474 aaKnown RBP7.67□□□□□ -1.18
COL28A1-202ENST00000430711 DHX34Q14147 1143 aaKnown RBP7.67□□□□□ -1.18
COL28A1-202ENST00000430711 CYP1B1Q16678 543 aa7.67□□□□□ -1.18
COL28A1-202ENST00000430711 PREPLQ4J6C6 727 aaPredicted RBP7.67□□□□□ -1.18
COL28A1-202ENST00000430711 FITM2Q8N6M3 262 aa7.67□□□□□ -1.18
COL28A1-202ENST00000430711 XXYLT1Q8NBI6 393 aa7.67□□□□□ -1.18
COL28A1-202ENST00000430711 CCDC197Q8NCU1 140 aa7.67□□□□□ -1.18
COL28A1-202ENST00000430711 ABHD8Q96I13 439 aa7.67□□□□□ -1.18
COL28A1-202ENST00000430711 AGO4Q9HCK5 861 aaKnown RBP7.67□□□□□ -1.18
COL28A1-202ENST00000430711 NINJ2Q9NZG7 142 aa7.67□□□□□ -1.18
COL28A1-202ENST00000430711 BAIAP2L1Q9UHR4 511 aa7.67□□□□□ -1.18
COL28A1-202ENST00000430711 ANAPC7Q9UJX3 599 aa7.67□□□□□ -1.18
COL28A1-202ENST00000430711 ODF2LQ9ULJ1 636 aa7.67□□□□□ -1.18
COL28A1-202ENST00000430711 ZNF541Q9H0D2 1346 aa7.67□□□□□ -1.18
COL28A1-202ENST00000430711 GOLGA6L10A0A0M3HER8 536 aa7.67□□□□□ -1.18
COL28A1-202ENST00000430711 CCDC169A6NNP5 214 aa7.67□□□□□ -1.18
COL28A1-202ENST00000430711 C21orf2O43822 256 aa7.67□□□□□ -1.18
COL28A1-202ENST00000430711 MGRN1O60291 552 aa7.67□□□□□ -1.18
COL28A1-202ENST00000430711 SNX3O60493 162 aa7.67□□□□□ -1.18
COL28A1-202ENST00000430711 SPAG7O75391 227 aa7.67□□□□□ -1.18
COL28A1-202ENST00000430711 FDX1P10109 184 aa7.67□□□□□ -1.18
COL28A1-202ENST00000430711 RALAP11233 206 aa7.67□□□□□ -1.18
COL28A1-202ENST00000430711 MYCLP12524 364 aaPredicted RBP7.67□□□□□ -1.18
COL28A1-202ENST00000430711 KRT5P13647 590 aa7.67□□□□□ -1.18
COL28A1-202ENST00000430711 PLS3P13797 630 aa7.67□□□□□ -1.18
COL28A1-202ENST00000430711 HOXA7P31268 230 aaPredicted RBP7.67□□□□□ -1.18
COL28A1-202ENST00000430711 CAP2P40123 477 aa7.67□□□□□ -1.18
COL28A1-202ENST00000430711 NPTX2P47972 431 aa7.67□□□□□ -1.18
COL28A1-202ENST00000430711 PDAP1Q13442 181 aaKnown RBP7.67□□□□□ -1.18
COL28A1-202ENST00000430711 FAM47EQ6ZV65 393 aa7.67□□□□□ -1.18
COL28A1-202ENST00000430711 MICALCLQ6ZW33 695 aa7.67□□□□□ -1.18
COL28A1-202ENST00000430711 SV2AQ7L0J3 742 aa7.67□□□□□ -1.18
COL28A1-202ENST00000430711 PNMA8AQ86V59 439 aaPredicted RBP7.67□□□□□ -1.18
COL28A1-202ENST00000430711 RHOT2Q8IXI1 618 aa7.67□□□□□ -1.18
COL28A1-202ENST00000430711 TMEM161BQ8NDZ6 487 aa7.67□□□□□ -1.18
COL28A1-202ENST00000430711 PARD3BQ8TEW8 1205 aa7.67□□□□□ -1.18
COL28A1-202ENST00000430711 AGAP11Q8TF27 550 aa7.67□□□□□ -1.18
COL28A1-202ENST00000430711 ARHGEF2Q92974 986 aaKnown RBP7.67□□□□□ -1.18
COL28A1-202ENST00000430711 UTP4Q969X6 686 aaKnown RBP7.67□□□□□ -1.18
COL28A1-202ENST00000430711 HAUS1Q96CS2 278 aa7.67□□□□□ -1.18
COL28A1-202ENST00000430711 DDX27Q96GQ7 796 aaKnown RBP7.67□□□□□ -1.18
COL28A1-202ENST00000430711 ZBTB45Q96K62 511 aaPredicted RBP7.67□□□□□ -1.18
COL28A1-202ENST00000430711 LBHD1Q9BQE6 289 aaPredicted RBP7.67□□□□□ -1.18
COL28A1-202ENST00000430711 CXorf56Q9H5V9 222 aa7.67□□□□□ -1.18
COL28A1-202ENST00000430711 APOBEC3GQ9HC16 384 aaKnown RBP7.67□□□□□ -1.18
COL28A1-202ENST00000430711 NOD2Q9HC29 1040 aa7.67□□□□□ -1.18
COL28A1-202ENST00000430711 SLCO1B3Q9NPD5 702 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms