RNA–Protein interactions for RNA: ENST00000429746.1

CTSD-203, Transcript of cathepsin D, humanhuman

TSL 3

Gene CTSD, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-203ENST00000429746 PYM1Q9BRP8 204 aaKnown RBP19.01■□□□□ 0.63
CTSD-203ENST00000429746 HERC2P3Q9BVR0 1158 aa19.01■□□□□ 0.63
CTSD-203ENST00000429746 CHST7Q9NS84 486 aa19.01■□□□□ 0.63
CTSD-203ENST00000429746 USP25Q9UHP3 1055 aa19.01■□□□□ 0.63
CTSD-203ENST00000429746 PLXNA3P51805 1871 aa19.01■□□□□ 0.63
CTSD-203ENST00000429746 FSD2A1L4K1 749 aa19■□□□□ 0.63
CTSD-203ENST00000429746 GRXCR2A6NFK2 248 aa19■□□□□ 0.63
CTSD-203ENST00000429746 PER2O15055 1255 aa19■□□□□ 0.63
CTSD-203ENST00000429746 TGFB1I1O43294 461 aa19■□□□□ 0.63
CTSD-203ENST00000429746 NRIP1P48552 1158 aa19■□□□□ 0.63
CTSD-203ENST00000429746 ALCAMQ13740 583 aa19■□□□□ 0.63
CTSD-203ENST00000429746 HSP90AA2PQ14568 343 aaPredicted RBP19■□□□□ 0.63
CTSD-203ENST00000429746 UPP1Q16831 310 aa19■□□□□ 0.63
CTSD-203ENST00000429746 FAM26FQ5R3K3 315 aa19■□□□□ 0.63
CTSD-203ENST00000429746 KRBA2Q6ZNG9 492 aa19■□□□□ 0.63
CTSD-203ENST00000429746 APBB1IPQ7Z5R6 666 aaPredicted RBP19■□□□□ 0.63
CTSD-203ENST00000429746 EFHBQ8N7U6 833 aa19■□□□□ 0.63
CTSD-203ENST00000429746 KIAA0895Q8NCT3 520 aa19■□□□□ 0.63
CTSD-203ENST00000429746 NECAB3Q96P71 396 aaPredicted RBP19■□□□□ 0.63
CTSD-203ENST00000429746 ACCSQ96QU6 501 aa19■□□□□ 0.63
CTSD-203ENST00000429746 C1QTNF1Q9BXJ1 281 aa19■□□□□ 0.63
CTSD-203ENST00000429746 NGRNQ9NPE2 291 aaKnown RBP19■□□□□ 0.63
CTSD-203ENST00000429746 CLEC1BQ9P126 229 aa19■□□□□ 0.63
CTSD-203ENST00000429746 PUF60Q9UHX1 559 aaKnown RBP19■□□□□ 0.63
CTSD-203ENST00000429746 TMEM189-UBE2V1I3L0A0 370 aa18.99■□□□□ 0.63
CTSD-203ENST00000429746 EIF3DO15371 548 aaKnown RBP eCLIP18.99■□□□□ 0.63
CTSD-203ENST00000429746 ZNF202O95125 648 aa18.99■□□□□ 0.63
CTSD-203ENST00000429746 SOD2P04179 222 aa18.99■□□□□ 0.63
CTSD-203ENST00000429746 CLCNKBP51801 687 aa18.99■□□□□ 0.63
CTSD-203ENST00000429746 DPYDQ12882 1025 aa18.99■□□□□ 0.63
CTSD-203ENST00000429746 STK4Q13043 487 aa18.99■□□□□ 0.63
CTSD-203ENST00000429746 BMT2Q1RMZ1 405 aa18.99■□□□□ 0.63
CTSD-203ENST00000429746 KIAA0319Q5VV43 1072 aa18.99■□□□□ 0.63
CTSD-203ENST00000429746 PTCRAQ6ISU1 281 aaPredicted RBP18.99■□□□□ 0.63
CTSD-203ENST00000429746 FUT10Q6P4F1 479 aa18.99■□□□□ 0.63
CTSD-203ENST00000429746 RBM23Q86U06 439 aaKnown RBP18.99■□□□□ 0.63
CTSD-203ENST00000429746 CEP57L1Q8IYX8 460 aa18.99■□□□□ 0.63
CTSD-203ENST00000429746 MSLNLQ96KJ4 702 aa18.99■□□□□ 0.63
CTSD-203ENST00000429746 B3GALT6Q96L58 329 aa18.99■□□□□ 0.63
CTSD-203ENST00000429746 CBWD1Q9BRT8 395 aa18.99■□□□□ 0.63
CTSD-203ENST00000429746 MSTO1Q9BUK6 570 aa18.99■□□□□ 0.63
CTSD-203ENST00000429746 ENTPD7Q9NQZ7 604 aa18.99■□□□□ 0.63
CTSD-203ENST00000429746 TOPORSQ9NS56 1045 aaPredicted RBP18.99■□□□□ 0.63
CTSD-203ENST00000429746 PRKAG3Q9UGI9 489 aa18.99■□□□□ 0.63
CTSD-203ENST00000429746 TUBGCP4Q9UGJ1 667 aa18.99■□□□□ 0.63
CTSD-203ENST00000429746 ADAM28Q9UKQ2 775 aa18.99■□□□□ 0.63
CTSD-203ENST00000429746 PCDHB13Q9Y5F0 798 aa18.99■□□□□ 0.63
CTSD-203ENST00000429746 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.98■□□□□ 0.63
CTSD-203ENST00000429746 LACTBL1A8MY62 500 aa18.98■□□□□ 0.63
CTSD-203ENST00000429746 GADD45BO75293 160 aaPredicted RBP18.98■□□□□ 0.63
CTSD-203ENST00000429746 ACOT2P49753 483 aa18.98■□□□□ 0.63
CTSD-203ENST00000429746 YARSP54577 528 aaKnown RBP18.98■□□□□ 0.63
CTSD-203ENST00000429746 SPAG1Q07617 926 aa18.98■□□□□ 0.63
CTSD-203ENST00000429746 SMC1AQ14683 1233 aaKnown RBP18.98■□□□□ 0.63
CTSD-203ENST00000429746 TMC7Q7Z402 723 aa18.98■□□□□ 0.63
CTSD-203ENST00000429746 TMEM87AQ8NBN3 555 aa18.98■□□□□ 0.63
CTSD-203ENST00000429746 PLEKHA5Q9HAU0 1116 aa18.98■□□□□ 0.63
CTSD-203ENST00000429746 CLDND1Q9NY35 253 aa18.98■□□□□ 0.63
CTSD-203ENST00000429746 CHMP5Q9NZZ3 219 aa18.98■□□□□ 0.63
CTSD-203ENST00000429746 SCN1AP35498 2009 aa18.97■□□□□ 0.63
CTSD-203ENST00000429746 CLASP2O75122 1294 aaKnown RBP18.97■□□□□ 0.63
CTSD-203ENST00000429746 ANP32AP39687 249 aaKnown RBP18.97■□□□□ 0.63
CTSD-203ENST00000429746 DSG1Q02413 1049 aa18.97■□□□□ 0.63
CTSD-203ENST00000429746 KMT5BQ4FZB7 885 aa18.97■□□□□ 0.63
CTSD-203ENST00000429746 TPRNQ4KMQ1 711 aa18.97■□□□□ 0.63
CTSD-203ENST00000429746 RTP2Q5QGT7 225 aa18.97■□□□□ 0.63
CTSD-203ENST00000429746 TMEM184AQ6ZMB5 413 aa18.97■□□□□ 0.63
CTSD-203ENST00000429746 FEZF2Q8TBJ5 459 aa18.97■□□□□ 0.63
CTSD-203ENST00000429746 HASPINQ8TF76 798 aa18.97■□□□□ 0.63
CTSD-203ENST00000429746 COLEC11Q9BWP8 271 aa18.97■□□□□ 0.63
CTSD-203ENST00000429746 IGFLR1Q9H665 355 aa18.97■□□□□ 0.63
CTSD-203ENST00000429746 SLC39A2Q9NP94 309 aa18.97■□□□□ 0.63
CTSD-203ENST00000429746 AGO2Q9UKV8 859 aaKnown RBP18.97■□□□□ 0.63
CTSD-203ENST00000429746 TSC2P49815 1807 aa18.96■□□□□ 0.63
CTSD-203ENST00000429746 H3BQ06 376 aaPredicted RBP18.96■□□□□ 0.63
CTSD-203ENST00000429746 CXCL14O95715 111 aa18.96■□□□□ 0.63
CTSD-203ENST00000429746 MYL1P05976 194 aa18.96■□□□□ 0.63
CTSD-203ENST00000429746 GARTP22102 1010 aa18.96■□□□□ 0.63
CTSD-203ENST00000429746 SLFN12LQ6IEE8 588 aa18.96■□□□□ 0.63
CTSD-203ENST00000429746 MICAL1Q8TDZ2 1067 aa18.96■□□□□ 0.63
CTSD-203ENST00000429746 SLC22A17Q8WUG5 538 aa18.96■□□□□ 0.63
CTSD-203ENST00000429746 TLE6Q9H808 572 aa18.96■□□□□ 0.63
CTSD-203ENST00000429746 TMEM206Q9H813 350 aa18.96■□□□□ 0.63
CTSD-203ENST00000429746 RXFP1Q9HBX9 757 aa18.96■□□□□ 0.63
CTSD-203ENST00000429746 TSHZ2Q9NRE2 1034 aa18.96■□□□□ 0.63
CTSD-203ENST00000429746 PPEF2O14830 753 aa18.95■□□□□ 0.62
CTSD-203ENST00000429746 NFICP08651 508 aa18.95■□□□□ 0.62
CTSD-203ENST00000429746 CNPP09543 421 aaKnown RBP18.95■□□□□ 0.62
CTSD-203ENST00000429746 LRPAP1P30533 357 aa18.95■□□□□ 0.62
CTSD-203ENST00000429746 MATR3P43243 847 aaKnown RBP eCLIP18.95■□□□□ 0.62
CTSD-203ENST00000429746 GUCY2FP51841 1108 aa18.95■□□□□ 0.62
CTSD-203ENST00000429746 POU5F1Q01860 360 aaKnown RBP18.95■□□□□ 0.62
CTSD-203ENST00000429746 KYAT1Q16773 422 aa18.95■□□□□ 0.62
CTSD-203ENST00000429746 SCARA3Q6AZY7 606 aa18.95■□□□□ 0.62
CTSD-203ENST00000429746 EP400NLQ6ZTU2 488 aa18.95■□□□□ 0.62
CTSD-203ENST00000429746 EFCAB13Q8IY85 973 aa18.95■□□□□ 0.62
CTSD-203ENST00000429746 POMGNT1Q8WZA1 660 aa18.95■□□□□ 0.62
CTSD-203ENST00000429746 SAAL1Q96ER3 474 aa18.95■□□□□ 0.62
CTSD-203ENST00000429746 FBXL18Q96ME1 805 aa18.95■□□□□ 0.62
CTSD-203ENST00000429746 UROC1Q96N76 676 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms