RNA–Protein interactions for RNA: ENST00000428848.7

CDH13-202, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CDH13, Length 2,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-202ENST00000428848 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.43□□□□□ -0.9
CDH13-202ENST00000428848 ZNF219Q9P2Y4 722 aaPredicted RBP9.43□□□□□ -0.9
CDH13-202ENST00000428848 UVRAGQ9P2Y5 699 aa9.43□□□□□ -0.9
CDH13-202ENST00000428848 PRKAG3Q9UGI9 489 aa9.43□□□□□ -0.9
CDH13-202ENST00000428848 CHORDC1Q9UHD1 332 aaPredicted RBP9.43□□□□□ -0.9
CDH13-202ENST00000428848 ENO4A6NNW6 628 aa9.42□□□□□ -0.9
CDH13-202ENST00000428848 TISP43B9A030 160 aa9.42□□□□□ -0.9
CDH13-202ENST00000428848 O00370 1275 aa9.42□□□□□ -0.9
CDH13-202ENST00000428848 ATMINO43313 823 aaPredicted RBP9.42□□□□□ -0.9
CDH13-202ENST00000428848 RTN3O95197 1032 aaPredicted RBP9.42□□□□□ -0.9
CDH13-202ENST00000428848 ECEL1O95672 775 aa9.42□□□□□ -0.9
CDH13-202ENST00000428848 GH2P01242 217 aa9.42□□□□□ -0.9
CDH13-202ENST00000428848 VIL1P09327 827 aaKnown RBP9.42□□□□□ -0.9
CDH13-202ENST00000428848 ARP10275 920 aa9.42□□□□□ -0.9
CDH13-202ENST00000428848 CHRNA5P30532 468 aa9.42□□□□□ -0.9
CDH13-202ENST00000428848 GCLMP48507 274 aa9.42□□□□□ -0.9
CDH13-202ENST00000428848 IFNAR2P48551 515 aa9.42□□□□□ -0.9
CDH13-202ENST00000428848 ROR2Q01974 943 aaKnown RBP9.42□□□□□ -0.9
CDH13-202ENST00000428848 LMNB2Q03252 620 aa9.42□□□□□ -0.9
CDH13-202ENST00000428848 CETN1Q12798 172 aa9.42□□□□□ -0.9
CDH13-202ENST00000428848 ALCAMQ13740 583 aa9.42□□□□□ -0.9
CDH13-202ENST00000428848 LONRF1Q17RB8 773 aa9.42□□□□□ -0.9
CDH13-202ENST00000428848 RNF207Q6ZRF8 634 aa9.42□□□□□ -0.9
CDH13-202ENST00000428848 SYCP3Q8IZU3 236 aa9.42□□□□□ -0.9
CDH13-202ENST00000428848 CKAP2Q8WWK9 683 aa9.42□□□□□ -0.9
CDH13-202ENST00000428848 SHC3Q92529 594 aa9.42□□□□□ -0.9
CDH13-202ENST00000428848 ARHGEF2Q92974 986 aaKnown RBP9.42□□□□□ -0.9
CDH13-202ENST00000428848 POP1Q99575 1024 aaKnown RBP9.42□□□□□ -0.9
CDH13-202ENST00000428848 CBWD1Q9BRT8 395 aa9.42□□□□□ -0.9
CDH13-202ENST00000428848 LXNQ9BS40 222 aa9.42□□□□□ -0.9
CDH13-202ENST00000428848 DDX23Q9BUQ8 820 aaKnown RBP9.42□□□□□ -0.9
CDH13-202ENST00000428848 TMEM117Q9H0C3 514 aa9.42□□□□□ -0.9
CDH13-202ENST00000428848 ST6GALNAC4Q9H4F1 302 aa9.42□□□□□ -0.9
CDH13-202ENST00000428848 SUDS3Q9H7L9 328 aaPredicted RBP9.42□□□□□ -0.9
CDH13-202ENST00000428848 ZFATQ9P243 1243 aa9.42□□□□□ -0.9
CDH13-202ENST00000428848 PSME4Q14997 1843 aa9.42□□□□□ -0.9
CDH13-202ENST00000428848 TMEM120BA0PK00 339 aa9.41□□□□□ -0.9
CDH13-202ENST00000428848 SPDYE2BA6NHP3 402 aa9.41□□□□□ -0.9
CDH13-202ENST00000428848 K7ENM7 598 aa9.41□□□□□ -0.9
CDH13-202ENST00000428848 TBC1D12O60347 775 aa9.41□□□□□ -0.9
CDH13-202ENST00000428848 GRIN3BO60391 1043 aa9.41□□□□□ -0.9
CDH13-202ENST00000428848 CLTAP09496 248 aa9.41□□□□□ -0.9
CDH13-202ENST00000428848 SPDYE6P0CI01 402 aa9.41□□□□□ -0.9
CDH13-202ENST00000428848 ITIH2P19823 946 aa9.41□□□□□ -0.9
CDH13-202ENST00000428848 CHKAP35790 457 aa9.41□□□□□ -0.9
CDH13-202ENST00000428848 MPP2Q14168 576 aa9.41□□□□□ -0.9
CDH13-202ENST00000428848 RASA3Q14644 834 aa9.41□□□□□ -0.9
CDH13-202ENST00000428848 FAM133BQ5BKY9 247 aaKnown RBP9.41□□□□□ -0.9
CDH13-202ENST00000428848 TBC1D1Q86TI0 1168 aaPredicted RBP9.41□□□□□ -0.9
CDH13-202ENST00000428848 FAM160B2Q86V87 743 aa9.41□□□□□ -0.9
CDH13-202ENST00000428848 LARGE2Q8N3Y3 721 aa9.41□□□□□ -0.9
CDH13-202ENST00000428848 GBP7Q8N8V2 638 aaPredicted RBP9.41□□□□□ -0.9
CDH13-202ENST00000428848 ZSWIM2Q8NEG5 633 aa9.41□□□□□ -0.9
CDH13-202ENST00000428848 AGBL3Q8NEM8 1001 aa9.41□□□□□ -0.9
CDH13-202ENST00000428848 ZFAND2BQ8WV99 257 aa9.41□□□□□ -0.9
CDH13-202ENST00000428848 DDX1Q92499 740 aaKnown RBP9.41□□□□□ -0.9
CDH13-202ENST00000428848 BTBD6Q96KE9 485 aa9.41□□□□□ -0.9
CDH13-202ENST00000428848 PCIF1Q9H4Z3 704 aa9.41□□□□□ -0.9
CDH13-202ENST00000428848 FGFR1OP2Q9NVK5 253 aa9.41□□□□□ -0.9
CDH13-202ENST00000428848 BCS1LQ9Y276 419 aa9.41□□□□□ -0.9
CDH13-202ENST00000428848 PTPN22Q9Y2R2 807 aa9.41□□□□□ -0.9
CDH13-202ENST00000428848 ARHGEF35A5YM69 484 aa9.41□□□□□ -0.9
CDH13-202ENST00000428848 TCP11X1B4DZS4 312 aa9.41□□□□□ -0.9
CDH13-202ENST00000428848 CYP26A1O43174 497 aa9.41□□□□□ -0.9
CDH13-202ENST00000428848 SPOPO43791 374 aa9.41□□□□□ -0.9
CDH13-202ENST00000428848 PLA2G6O60733 806 aa9.41□□□□□ -0.9
CDH13-202ENST00000428848 DIAPH2O60879 1101 aa9.41□□□□□ -0.9
CDH13-202ENST00000428848 SUN1O94901 812 aa9.41□□□□□ -0.9
CDH13-202ENST00000428848 TTC4O95801 387 aa9.41□□□□□ -0.9
CDH13-202ENST00000428848 CFBP00751 764 aa9.41□□□□□ -0.9
CDH13-202ENST00000428848 LINGO3P0C6S8 592 aa9.41□□□□□ -0.9
CDH13-202ENST00000428848 POLR2MP0CAP2 368 aa9.41□□□□□ -0.9
CDH13-202ENST00000428848 GCLCP48506 637 aaPredicted RBP9.41□□□□□ -0.9
CDH13-202ENST00000428848 PAPOLAP51003 745 aaKnown RBP9.41□□□□□ -0.9
CDH13-202ENST00000428848 SNRPFP62306 86 aaKnown RBP9.41□□□□□ -0.9
CDH13-202ENST00000428848 KCNJ2P63252 427 aa9.41□□□□□ -0.9
CDH13-202ENST00000428848 GTF2BQ00403 316 aa9.41□□□□□ -0.9
CDH13-202ENST00000428848 KRT17Q04695 432 aa9.41□□□□□ -0.9
CDH13-202ENST00000428848 CALCOCO2Q13137 446 aa9.41□□□□□ -0.9
CDH13-202ENST00000428848 PTK6Q13882 451 aa9.41□□□□□ -0.9
CDH13-202ENST00000428848 GPR162Q16538 588 aa9.41□□□□□ -0.9
CDH13-202ENST00000428848 PADI6Q6TGC4 694 aa9.41□□□□□ -0.9
CDH13-202ENST00000428848 SYDE1Q6ZW31 735 aaPredicted RBP9.41□□□□□ -0.9
CDH13-202ENST00000428848 ASRGL1Q7L266 308 aa9.41□□□□□ -0.9
CDH13-202ENST00000428848 PNMA8AQ86V59 439 aaPredicted RBP9.41□□□□□ -0.9
CDH13-202ENST00000428848 SLC47A2Q86VL8 602 aa9.41□□□□□ -0.9
CDH13-202ENST00000428848 XXYLT1Q8NBI6 393 aa9.41□□□□□ -0.9
CDH13-202ENST00000428848 MTMR14Q8NCE2 650 aa9.41□□□□□ -0.9
CDH13-202ENST00000428848 NLGN2Q8NFZ4 835 aa9.41□□□□□ -0.9
CDH13-202ENST00000428848 PRMT6Q96LA8 375 aaPredicted RBP9.41□□□□□ -0.9
CDH13-202ENST00000428848 ACCSQ96QU6 501 aa9.41□□□□□ -0.9
CDH13-202ENST00000428848 RIT2Q99578 217 aa9.41□□□□□ -0.9
CDH13-202ENST00000428848 ZNF577Q9BSK1 485 aa9.41□□□□□ -0.9
CDH13-202ENST00000428848 TEKT3Q9BXF9 490 aa9.41□□□□□ -0.9
CDH13-202ENST00000428848 DEFB129Q9H1M3 183 aa9.41□□□□□ -0.9
CDH13-202ENST00000428848 ACP6Q9NPH0 428 aa9.41□□□□□ -0.9
CDH13-202ENST00000428848 ARHGEF3Q9NR81 526 aa9.41□□□□□ -0.9
CDH13-202ENST00000428848 EURLQ9NYK6 297 aa9.41□□□□□ -0.9
CDH13-202ENST00000428848 HSPBP1Q9NZL4 362 aa9.41□□□□□ -0.9
CDH13-202ENST00000428848 LGALS13Q9UHV8 139 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms