RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 RAB33AQ14088 237 aa17.04■□□□□ 0.32
SEC13-210ENST00000428626 ZNF568Q3ZCX4 644 aa17.04■□□□□ 0.32
SEC13-210ENST00000428626 HYIQ5T013 277 aa17.04■□□□□ 0.32
SEC13-210ENST00000428626 MCTP1Q6DN14 999 aa17.04■□□□□ 0.32
SEC13-210ENST00000428626 DCLRE1AQ6PJP8 1040 aa17.04■□□□□ 0.32
SEC13-210ENST00000428626 LRRC15Q8TF66 581 aa17.04■□□□□ 0.32
SEC13-210ENST00000428626 DDX27Q96GQ7 796 aaKnown RBP17.04■□□□□ 0.32
SEC13-210ENST00000428626 RAB34Q9BZG1 259 aa17.04■□□□□ 0.32
SEC13-210ENST00000428626 KMT5AQ9NQR1 393 aa17.04■□□□□ 0.32
SEC13-210ENST00000428626 MTRRQ9UBK8 725 aa17.04■□□□□ 0.32
SEC13-210ENST00000428626 CITO14578 2027 aa17.04■□□□□ 0.32
SEC13-210ENST00000428626 MYH11P35749 1972 aa17.04■□□□□ 0.32
SEC13-210ENST00000428626 COL4A3Q01955 1670 aa17.04■□□□□ 0.32
SEC13-210ENST00000428626 CCL16O15467 120 aa17.03■□□□□ 0.32
SEC13-210ENST00000428626 GJB2P29033 226 aa17.03■□□□□ 0.32
SEC13-210ENST00000428626 ELAVL2Q12926 359 aaKnown RBP17.03■□□□□ 0.32
SEC13-210ENST00000428626 DMP1Q13316 513 aaPredicted RBP17.03■□□□□ 0.32
SEC13-210ENST00000428626 ZRSR1Q15695 479 aaKnown RBP17.03■□□□□ 0.32
SEC13-210ENST00000428626 SEZ6Q53EL9 994 aa17.03■□□□□ 0.32
SEC13-210ENST00000428626 POTEHQ6S545 545 aa17.03■□□□□ 0.32
SEC13-210ENST00000428626 SLC7A14Q8TBB6 771 aa17.03■□□□□ 0.32
SEC13-210ENST00000428626 SNX27Q96L92 541 aa17.03■□□□□ 0.32
SEC13-210ENST00000428626 MRPL4Q9BYD3 311 aaKnown RBP17.03■□□□□ 0.32
SEC13-210ENST00000428626 HCFC1R1Q9NWW0 138 aa17.03■□□□□ 0.32
SEC13-210ENST00000428626 FBXL21Q9UKT6 434 aa17.03■□□□□ 0.32
SEC13-210ENST00000428626 STK24Q9Y6E0 443 aa17.03■□□□□ 0.32
SEC13-210ENST00000428626 NUMBLQ9Y6R0 609 aa17.03■□□□□ 0.32
SEC13-210ENST00000428626 FAM186AA6NE01 2351 aa17.02■□□□□ 0.32
SEC13-210ENST00000428626 NPHP3-ACAD11A0A0J9YXS1 232 aa17.02■□□□□ 0.32
SEC13-210ENST00000428626 FSHRP23945 695 aa17.02■□□□□ 0.32
SEC13-210ENST00000428626 GUCY2CP25092 1073 aa17.02■□□□□ 0.32
SEC13-210ENST00000428626 SLC12A3P55017 1021 aa17.02■□□□□ 0.32
SEC13-210ENST00000428626 CACNB1Q02641 598 aaPredicted RBP17.02■□□□□ 0.32
SEC13-210ENST00000428626 RILPL1Q5EBL4 403 aa17.02■□□□□ 0.32
SEC13-210ENST00000428626 PPM1LQ5SGD2 360 aa17.02■□□□□ 0.32
SEC13-210ENST00000428626 TMEM161BQ8NDZ6 487 aa17.02■□□□□ 0.32
SEC13-210ENST00000428626 ITFG1Q8TB96 612 aa17.02■□□□□ 0.32
SEC13-210ENST00000428626 GPR152Q8TDT2 470 aa17.02■□□□□ 0.32
SEC13-210ENST00000428626 FGF14Q92915 247 aa17.02■□□□□ 0.32
SEC13-210ENST00000428626 C18orf25Q96B23 403 aaPredicted RBP17.02■□□□□ 0.32
SEC13-210ENST00000428626 DRC1Q96MC2 740 aa17.02■□□□□ 0.32
SEC13-210ENST00000428626 NTPCRQ9BSD7 190 aaKnown RBP17.02■□□□□ 0.32
SEC13-210ENST00000428626 CCDC94Q9BW85 323 aaPredicted RBP17.02■□□□□ 0.32
SEC13-210ENST00000428626 HAPLN2Q9GZV7 340 aa17.02■□□□□ 0.32
SEC13-210ENST00000428626 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.02■□□□□ 0.32
SEC13-210ENST00000428626 WNT16Q9UBV4 365 aa17.02■□□□□ 0.32
SEC13-210ENST00000428626 CA14Q9ULX7 337 aa17.02■□□□□ 0.32
SEC13-210ENST00000428626 CDY1Q9Y6F8 540 aa17.02■□□□□ 0.32
SEC13-210ENST00000428626 MYH15Q9Y2K3 1946 aa17.02■□□□□ 0.31
SEC13-210ENST00000428626 PDCD11Q14690 1871 aaKnown RBP17.01■□□□□ 0.31
SEC13-210ENST00000428626 VWA3AA6NCI4 1184 aa17.01■□□□□ 0.31
SEC13-210ENST00000428626 PROB1E7EW31 1015 aa17.01■□□□□ 0.31
SEC13-210ENST00000428626 GFRA3O60609 400 aa17.01■□□□□ 0.31
SEC13-210ENST00000428626 HNRNPA1P09651 372 aaKnown RBP eCLIP17.01■□□□□ 0.31
SEC13-210ENST00000428626 MCF2P10911 925 aa17.01■□□□□ 0.31
SEC13-210ENST00000428626 SRFP11831 508 aa17.01■□□□□ 0.31
SEC13-210ENST00000428626 HARSP12081 509 aaKnown RBP17.01■□□□□ 0.31
SEC13-210ENST00000428626 HOXA9P31269 272 aa17.01■□□□□ 0.31
SEC13-210ENST00000428626 TMEM119Q4V9L6 283 aa17.01■□□□□ 0.31
SEC13-210ENST00000428626 ARSHQ5FYA8 562 aa17.01■□□□□ 0.31
SEC13-210ENST00000428626 AXDND1Q5T1B0 1012 aaPredicted RBP17.01■□□□□ 0.31
SEC13-210ENST00000428626 LIN9Q5TKA1 542 aa17.01■□□□□ 0.31
SEC13-210ENST00000428626 PARM1Q6UWI2 310 aa17.01■□□□□ 0.31
SEC13-210ENST00000428626 MPZL3Q6UWV2 235 aa17.01■□□□□ 0.31
SEC13-210ENST00000428626 ASCL5Q7RTU5 278 aa17.01■□□□□ 0.31
SEC13-210ENST00000428626 SYT2Q8N9I0 419 aaPredicted RBP17.01■□□□□ 0.31
SEC13-210ENST00000428626 UROC1Q96N76 676 aa17.01■□□□□ 0.31
SEC13-210ENST00000428626 CNTN3Q9P232 1028 aa17.01■□□□□ 0.31
SEC13-210ENST00000428626 DNMT3BQ9UBC3 853 aaKnown RBP17.01■□□□□ 0.31
SEC13-210ENST00000428626 RBM19Q9Y4C8 960 aaKnown RBP17.01■□□□□ 0.31
SEC13-210ENST00000428626 BACE2Q9Y5Z0 518 aa17.01■□□□□ 0.31
SEC13-210ENST00000428626 PODXLO00592 558 aa17■□□□□ 0.31
SEC13-210ENST00000428626 TBC1D4O60343 1298 aa17■□□□□ 0.31
SEC13-210ENST00000428626 MAPTP10636 758 aaKnown RBP17■□□□□ 0.31
SEC13-210ENST00000428626 PLS3P13797 630 aa17■□□□□ 0.31
SEC13-210ENST00000428626 KCNE1P15382 129 aa17■□□□□ 0.31
SEC13-210ENST00000428626 NBL1P41271 181 aa17■□□□□ 0.31
SEC13-210ENST00000428626 YARSP54577 528 aaKnown RBP17■□□□□ 0.31
SEC13-210ENST00000428626 GRIN1Q05586 938 aa17■□□□□ 0.31
SEC13-210ENST00000428626 SLC10A6Q3KNW5 377 aa17■□□□□ 0.31
SEC13-210ENST00000428626 CCDC105Q8IYK2 499 aa17■□□□□ 0.31
SEC13-210ENST00000428626 SPIRE2Q8WWL2 714 aa17■□□□□ 0.31
SEC13-210ENST00000428626 FGF13Q92913 245 aa17■□□□□ 0.31
SEC13-210ENST00000428626 NXPE3Q969Y0 559 aa17■□□□□ 0.31
SEC13-210ENST00000428626 ACAP3Q96P50 834 aa17■□□□□ 0.31
SEC13-210ENST00000428626 C17orf75Q9HAS0 396 aa17■□□□□ 0.31
SEC13-210ENST00000428626 TOPORSQ9NS56 1045 aaPredicted RBP17■□□□□ 0.31
SEC13-210ENST00000428626 CDH7Q9ULB5 785 aa17■□□□□ 0.31
SEC13-210ENST00000428626 POLIQ9UNA4 740 aa17■□□□□ 0.31
SEC13-210ENST00000428626 WDR27A2RRH5 827 aa16.99■□□□□ 0.31
SEC13-210ENST00000428626 NRG2O14511 850 aaPredicted RBP16.99■□□□□ 0.31
SEC13-210ENST00000428626 ST18O60284 1047 aa16.99■□□□□ 0.31
SEC13-210ENST00000428626 PLA2G4BP0C869 781 aa16.99■□□□□ 0.31
SEC13-210ENST00000428626 ROR1Q01973 937 aa16.99■□□□□ 0.31
SEC13-210ENST00000428626 VARS2Q5ST30 1063 aaKnown RBP16.99■□□□□ 0.31
SEC13-210ENST00000428626 PDXDC1Q6P996 788 aa16.99■□□□□ 0.31
SEC13-210ENST00000428626 APBB1IPQ7Z5R6 666 aaPredicted RBP16.99■□□□□ 0.31
SEC13-210ENST00000428626 DTWD2Q8NBA8 298 aa16.99■□□□□ 0.31
SEC13-210ENST00000428626 TCHPQ9BT92 498 aa16.99■□□□□ 0.31
SEC13-210ENST00000428626 IRF2BPLQ9H1B7 796 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms