RNA–Protein interactions for RNA: ENST00000428239.5

CDC7-203, Transcript of cell division cycle 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC7, Length 3,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7-203ENST00000428239 YBX2Q9Y2T7 364 aaKnown RBP7.6□□□□□ -1.19
CDC7-203ENST00000428239 MYH11P35749 1972 aa7.6□□□□□ -1.19
CDC7-203ENST00000428239 LINC01553A4QN01 128 aa7.6□□□□□ -1.19
CDC7-203ENST00000428239 I3L4J1 428 aa7.6□□□□□ -1.19
CDC7-203ENST00000428239 RFXAPO00287 272 aa7.6□□□□□ -1.19
CDC7-203ENST00000428239 TGFB1I1O43294 461 aa7.6□□□□□ -1.19
CDC7-203ENST00000428239 PPP1R37O75864 691 aa7.6□□□□□ -1.19
CDC7-203ENST00000428239 IL18RAPO95256 599 aa7.6□□□□□ -1.19
CDC7-203ENST00000428239 NFICP08651 508 aa7.6□□□□□ -1.19
CDC7-203ENST00000428239 ATF7P17544 494 aaPredicted RBP7.6□□□□□ -1.19
CDC7-203ENST00000428239 ADSSP30520 456 aa7.6□□□□□ -1.19
CDC7-203ENST00000428239 PPM1AP35813 382 aa7.6□□□□□ -1.19
CDC7-203ENST00000428239 CDR1P51861 262 aa7.6□□□□□ -1.19
CDC7-203ENST00000428239 TUSC3Q13454 348 aa7.6□□□□□ -1.19
CDC7-203ENST00000428239 DUOXA2Q1HG44 320 aa7.6□□□□□ -1.19
CDC7-203ENST00000428239 ZSWIM2Q8NEG5 633 aa7.6□□□□□ -1.19
CDC7-203ENST00000428239 GDPD5Q8WTR4 605 aa7.6□□□□□ -1.19
CDC7-203ENST00000428239 POP1Q99575 1024 aaKnown RBP7.6□□□□□ -1.19
CDC7-203ENST00000428239 MTMR12Q9C0I1 747 aa7.6□□□□□ -1.19
CDC7-203ENST00000428239 NXF1Q9UBU9 619 aaKnown RBP7.6□□□□□ -1.19
CDC7-203ENST00000428239 AGAP1Q9UPQ3 857 aa7.6□□□□□ -1.19
CDC7-203ENST00000428239 RWDD3Q9Y3V2 267 aa7.6□□□□□ -1.19
CDC7-203ENST00000428239 TRAPPC3O43617 180 aa7.59□□□□□ -1.19
CDC7-203ENST00000428239 CD44P16070 742 aaKnown RBP7.59□□□□□ -1.19
CDC7-203ENST00000428239 PIK3CAP42336 1068 aa7.59□□□□□ -1.19
CDC7-203ENST00000428239 GCLMP48507 274 aa7.59□□□□□ -1.19
CDC7-203ENST00000428239 ZNF165P49910 485 aa7.59□□□□□ -1.19
CDC7-203ENST00000428239 CCDC85BQ15834 202 aaPredicted RBP7.59□□□□□ -1.19
CDC7-203ENST00000428239 SLC10A6Q3KNW5 377 aa7.59□□□□□ -1.19
CDC7-203ENST00000428239 Q7L0L9 218 aa7.59□□□□□ -1.19
CDC7-203ENST00000428239 FAM114A1Q8IWE2 563 aa7.59□□□□□ -1.19
CDC7-203ENST00000428239 DEFB123Q8N688 67 aa7.59□□□□□ -1.19
CDC7-203ENST00000428239 AOPEPQ8N6M6 819 aa7.59□□□□□ -1.19
CDC7-203ENST00000428239 PPP2R3CQ969Q6 453 aa7.59□□□□□ -1.19
CDC7-203ENST00000428239 SEMA6BQ9H3T3 888 aa7.59□□□□□ -1.19
CDC7-203ENST00000428239 IGFLR1Q9H665 355 aa7.59□□□□□ -1.19
CDC7-203ENST00000428239 NRDE2Q9H7Z3 1164 aa7.59□□□□□ -1.19
CDC7-203ENST00000428239 TUBGCP4Q9UGJ1 667 aa7.59□□□□□ -1.19
CDC7-203ENST00000428239 PLAGL2Q9UPG8 496 aa7.59□□□□□ -1.19
CDC7-203ENST00000428239 RANBP2P49792 3224 aaKnown RBP7.59□□□□□ -1.19
CDC7-203ENST00000428239 PIGRP01833 764 aa7.59□□□□□ -1.19
CDC7-203ENST00000428239 ITGB3P05106 788 aa7.59□□□□□ -1.19
CDC7-203ENST00000428239 URODP06132 367 aa7.59□□□□□ -1.19
CDC7-203ENST00000428239 SNRPFP62306 86 aaKnown RBP7.59□□□□□ -1.19
CDC7-203ENST00000428239 FAM189BP81408 668 aa7.59□□□□□ -1.19
CDC7-203ENST00000428239 MYO1EQ12965 1108 aa7.59□□□□□ -1.19
CDC7-203ENST00000428239 ZSCAN23Q3MJ62 389 aa7.59□□□□□ -1.19
CDC7-203ENST00000428239 PLPP4Q5VZY2 271 aa7.59□□□□□ -1.19
CDC7-203ENST00000428239 INTS8Q75QN2 995 aaKnown RBP7.59□□□□□ -1.19
CDC7-203ENST00000428239 EPM2AIP1Q7L775 607 aaPredicted RBP7.59□□□□□ -1.19
CDC7-203ENST00000428239 DPH6Q7L8W6 267 aa7.59□□□□□ -1.19
CDC7-203ENST00000428239 RBM23Q86U06 439 aaKnown RBP7.59□□□□□ -1.19
CDC7-203ENST00000428239 BRSK2Q8IWQ3 736 aa7.59□□□□□ -1.19
CDC7-203ENST00000428239 CD302Q8IX05 232 aa7.59□□□□□ -1.19
CDC7-203ENST00000428239 KLHL23Q8NBE8 558 aa7.59□□□□□ -1.19
CDC7-203ENST00000428239 SNX27Q96L92 541 aa7.59□□□□□ -1.19
CDC7-203ENST00000428239 ANP32EQ9BTT0 268 aa7.59□□□□□ -1.19
CDC7-203ENST00000428239 MIOSQ9NXC5 875 aa7.59□□□□□ -1.19
CDC7-203ENST00000428239 DPP3Q9NY33 737 aa7.59□□□□□ -1.19
CDC7-203ENST00000428239 NFE2L3Q9Y4A8 694 aa7.59□□□□□ -1.19
CDC7-203ENST00000428239 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.59□□□□□ -1.19
CDC7-203ENST00000428239 WDR81Q562E7 1941 aa7.59□□□□□ -1.19
CDC7-203ENST00000428239 A0A1W2PPC1 479 aa7.58□□□□□ -1.2
CDC7-203ENST00000428239 PODXLO00592 558 aa7.58□□□□□ -1.2
CDC7-203ENST00000428239 NRP1O14786 923 aa7.58□□□□□ -1.2
CDC7-203ENST00000428239 FGF18O76093 207 aa7.58□□□□□ -1.2
CDC7-203ENST00000428239 POLR2BP30876 1174 aaKnown RBP7.58□□□□□ -1.2
CDC7-203ENST00000428239 SLC11A1P49279 550 aa7.58□□□□□ -1.2
CDC7-203ENST00000428239 CLCNKBP51801 687 aa7.58□□□□□ -1.2
CDC7-203ENST00000428239 VAMP7P51809 220 aa7.58□□□□□ -1.2
CDC7-203ENST00000428239 SMAD3P84022 425 aaKnown RBP7.58□□□□□ -1.2
CDC7-203ENST00000428239 EPC2Q52LR7 807 aa7.58□□□□□ -1.2
CDC7-203ENST00000428239 FAM171A1Q5VUB5 890 aa7.58□□□□□ -1.2
CDC7-203ENST00000428239 ZNF598Q86UK7 904 aaKnown RBP7.58□□□□□ -1.2
CDC7-203ENST00000428239 ELOA2Q8IYF1 753 aaPredicted RBP7.58□□□□□ -1.2
CDC7-203ENST00000428239 VWCEQ96DN2 955 aa7.58□□□□□ -1.2
CDC7-203ENST00000428239 CASD1Q96PB1 797 aa7.58□□□□□ -1.2
CDC7-203ENST00000428239 ASB7Q9H672 318 aa7.58□□□□□ -1.2
CDC7-203ENST00000428239 PTPRHQ9HD43 1115 aa7.58□□□□□ -1.2
CDC7-203ENST00000428239 CPSF3Q9UKF6 684 aaKnown RBP7.58□□□□□ -1.2
CDC7-203ENST00000428239 LOXHD1Q8IVV2 1947 aa7.58□□□□□ -1.2
CDC7-203ENST00000428239 ALPK3Q96L96 1907 aa7.58□□□□□ -1.2
CDC7-203ENST00000428239 ARID2Q68CP9 1835 aa7.58□□□□□ -1.2
CDC7-203ENST00000428239 AKAP3O75969 853 aa7.58□□□□□ -1.2
CDC7-203ENST00000428239 DDHD2O94830 711 aa7.58□□□□□ -1.2
CDC7-203ENST00000428239 HOXD13P35453 343 aa7.58□□□□□ -1.2
CDC7-203ENST00000428239 BMPR1AP36894 532 aa7.58□□□□□ -1.2
CDC7-203ENST00000428239 PMS1P54277 932 aaKnown RBP7.58□□□□□ -1.2
CDC7-203ENST00000428239 TNNC1P63316 161 aa7.58□□□□□ -1.2
CDC7-203ENST00000428239 EHHADHQ08426 723 aa7.58□□□□□ -1.2
CDC7-203ENST00000428239 LRMPQ12912 555 aa7.58□□□□□ -1.2
CDC7-203ENST00000428239 PTPROQ16827 1216 aa7.58□□□□□ -1.2
CDC7-203ENST00000428239 BMT2Q1RMZ1 405 aa7.58□□□□□ -1.2
CDC7-203ENST00000428239 EDRF1Q3B7T1 1238 aa7.58□□□□□ -1.2
CDC7-203ENST00000428239 SCARA5Q6ZMJ2 495 aa7.58□□□□□ -1.2
CDC7-203ENST00000428239 SPRED2Q7Z698 418 aa7.58□□□□□ -1.2
CDC7-203ENST00000428239 MRPL10Q7Z7H8 261 aaKnown RBP7.58□□□□□ -1.2
CDC7-203ENST00000428239 VPS52Q8N1B4 723 aa7.58□□□□□ -1.2
CDC7-203ENST00000428239 DDX27Q96GQ7 796 aaKnown RBP7.58□□□□□ -1.2
CDC7-203ENST00000428239 ZNF560Q96MR9 790 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms