RNA–Protein interactions for RNA: ENST00000427566.2

CLK3P2-201, Transcript of CDC like kinase 3 pseudogene 2, humanhuman

BASIC

Gene CLK3P2, Length 1,453 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P2-201ENST00000427566 ZNF507Q8TCN5 953 aa17.11■□□□□ 0.33
CLK3P2-201ENST00000427566 GPT2Q8TD30 523 aa17.11■□□□□ 0.33
CLK3P2-201ENST00000427566 COLEC11Q9BWP8 271 aa17.11■□□□□ 0.33
CLK3P2-201ENST00000427566 STYXL1Q9Y6J8 313 aa17.11■□□□□ 0.33
CLK3P2-201ENST00000427566 CASTOR2A6NHX0 329 aa17.1■□□□□ 0.33
CLK3P2-201ENST00000427566 F8W810 466 aa17.1■□□□□ 0.33
CLK3P2-201ENST00000427566 EIF3DO15371 548 aaKnown RBP eCLIP17.1■□□□□ 0.33
CLK3P2-201ENST00000427566 KINO60870 393 aaKnown RBP17.1■□□□□ 0.33
CLK3P2-201ENST00000427566 TBX10O75333 385 aa17.1■□□□□ 0.33
CLK3P2-201ENST00000427566 RHOBTB3O94955 611 aa17.1■□□□□ 0.33
CLK3P2-201ENST00000427566 ABCD1P33897 745 aa17.1■□□□□ 0.33
CLK3P2-201ENST00000427566 LTBRP36941 435 aa17.1■□□□□ 0.33
CLK3P2-201ENST00000427566 ZNF445P59923 1031 aa17.1■□□□□ 0.33
CLK3P2-201ENST00000427566 RBM10P98175 930 aaKnown RBP17.1■□□□□ 0.33
CLK3P2-201ENST00000427566 DSC1Q08554 894 aa17.1■□□□□ 0.33
CLK3P2-201ENST00000427566 ALCAMQ13740 583 aa17.1■□□□□ 0.33
CLK3P2-201ENST00000427566 DUSP6Q16828 381 aa17.1■□□□□ 0.33
CLK3P2-201ENST00000427566 LEXMQ3ZCV2 418 aa17.1■□□□□ 0.33
CLK3P2-201ENST00000427566 PTCRAQ6ISU1 281 aaPredicted RBP17.1■□□□□ 0.33
CLK3P2-201ENST00000427566 SYCP3Q8IZU3 236 aa17.1■□□□□ 0.33
CLK3P2-201ENST00000427566 TMEM130Q8N3G9 435 aa17.1■□□□□ 0.33
CLK3P2-201ENST00000427566 NECAB3Q96P71 396 aaPredicted RBP17.1■□□□□ 0.33
CLK3P2-201ENST00000427566 MSTO1Q9BUK6 570 aa17.1■□□□□ 0.33
CLK3P2-201ENST00000427566 ZBP1Q9H171 429 aa17.1■□□□□ 0.33
CLK3P2-201ENST00000427566 BARX2Q9UMQ3 279 aaPredicted RBP17.1■□□□□ 0.33
CLK3P2-201ENST00000427566 PCDHA5Q9Y5H7 936 aa17.1■□□□□ 0.33
CLK3P2-201ENST00000427566 C2orf71A6NGG8 1288 aa17.09■□□□□ 0.33
CLK3P2-201ENST00000427566 C2CD2LO14523 706 aa17.09■□□□□ 0.33
CLK3P2-201ENST00000427566 TGFB1I1O43294 461 aa17.09■□□□□ 0.33
CLK3P2-201ENST00000427566 ACOT2P49753 483 aa17.09■□□□□ 0.33
CLK3P2-201ENST00000427566 MRE11P49959 708 aa17.09■□□□□ 0.33
CLK3P2-201ENST00000427566 TUSC3Q13454 348 aa17.09■□□□□ 0.33
CLK3P2-201ENST00000427566 CTC1Q2NKJ3 1217 aa17.09■□□□□ 0.33
CLK3P2-201ENST00000427566 SLC10A6Q3KNW5 377 aa17.09■□□□□ 0.33
CLK3P2-201ENST00000427566 CAVIN1Q6NZI2 390 aaKnown RBP17.09■□□□□ 0.33
CLK3P2-201ENST00000427566 ALKAL1Q6UXT8 129 aa17.09■□□□□ 0.33
CLK3P2-201ENST00000427566 MRPL43Q8N983 215 aaKnown RBP17.09■□□□□ 0.33
CLK3P2-201ENST00000427566 HASPINQ8TF76 798 aa17.09■□□□□ 0.33
CLK3P2-201ENST00000427566 POMGNT1Q8WZA1 660 aa17.09■□□□□ 0.33
CLK3P2-201ENST00000427566 ZMAT2Q96NC0 199 aaKnown RBP17.09■□□□□ 0.33
CLK3P2-201ENST00000427566 ACAP3Q96P50 834 aa17.09■□□□□ 0.33
CLK3P2-201ENST00000427566 UHRF1Q96T88 793 aaPredicted RBP17.09■□□□□ 0.33
CLK3P2-201ENST00000427566 CDCA3Q99618 268 aaPredicted RBP17.09■□□□□ 0.33
CLK3P2-201ENST00000427566 CBWD1Q9BRT8 395 aa17.09■□□□□ 0.33
CLK3P2-201ENST00000427566 VN1R3Q9BXE9 311 aa17.09■□□□□ 0.33
CLK3P2-201ENST00000427566 PCIF1Q9H4Z3 704 aa17.09■□□□□ 0.33
CLK3P2-201ENST00000427566 TOPORSQ9NS56 1045 aaPredicted RBP17.09■□□□□ 0.33
CLK3P2-201ENST00000427566 MARCH5Q9NX47 278 aa17.09■□□□□ 0.33
CLK3P2-201ENST00000427566 EXOC7Q9UPT5 735 aa17.09■□□□□ 0.33
CLK3P2-201ENST00000427566 MAPK8IP1Q9UQF2 711 aa17.09■□□□□ 0.33
CLK3P2-201ENST00000427566 PLXNA3P51805 1871 aa17.08■□□□□ 0.33
CLK3P2-201ENST00000427566 OGTO15294 1046 aa17.08■□□□□ 0.32
CLK3P2-201ENST00000427566 TADA2AO75478 443 aa17.08■□□□□ 0.32
CLK3P2-201ENST00000427566 CXCL8P10145 99 aa17.08■□□□□ 0.32
CLK3P2-201ENST00000427566 CTSAP10619 480 aa17.08■□□□□ 0.32
CLK3P2-201ENST00000427566 IL9P15248 144 aa17.08■□□□□ 0.32
CLK3P2-201ENST00000427566 PSMD2Q13200 908 aa17.08■□□□□ 0.32
CLK3P2-201ENST00000427566 NAB2Q15742 525 aa17.08■□□□□ 0.32
CLK3P2-201ENST00000427566 CAMK4Q16566 473 aa17.08■□□□□ 0.32
CLK3P2-201ENST00000427566 SMYD4Q8IYR2 804 aaPredicted RBP17.08■□□□□ 0.32
CLK3P2-201ENST00000427566 SYAP1Q96A49 352 aaPredicted RBP17.08■□□□□ 0.32
CLK3P2-201ENST00000427566 SAAL1Q96ER3 474 aa17.08■□□□□ 0.32
CLK3P2-201ENST00000427566 SNX27Q96L92 541 aa17.08■□□□□ 0.32
CLK3P2-201ENST00000427566 PAAF1Q9BRP4 392 aa17.08■□□□□ 0.32
CLK3P2-201ENST00000427566 TMEM206Q9H813 350 aa17.08■□□□□ 0.32
CLK3P2-201ENST00000427566 CD207Q9UJ71 328 aa17.08■□□□□ 0.32
CLK3P2-201ENST00000427566 AGO2Q9UKV8 859 aaKnown RBP17.08■□□□□ 0.32
CLK3P2-201ENST00000427566 GLP2RO95838 553 aa17.07■□□□□ 0.32
CLK3P2-201ENST00000427566 URODP06132 367 aa17.07■□□□□ 0.32
CLK3P2-201ENST00000427566 SRGAP2BP0DMP2 458 aa17.07■□□□□ 0.32
CLK3P2-201ENST00000427566 SPAG1Q07617 926 aa17.07■□□□□ 0.32
CLK3P2-201ENST00000427566 HSP90AA2PQ14568 343 aaPredicted RBP17.07■□□□□ 0.32
CLK3P2-201ENST00000427566 KCNB1Q14721 858 aa17.07■□□□□ 0.32
CLK3P2-201ENST00000427566 COL19A1Q14993 1142 aa17.07■□□□□ 0.32
CLK3P2-201ENST00000427566 ENOX2Q16206 610 aaKnown RBP17.07■□□□□ 0.32
CLK3P2-201ENST00000427566 BMT2Q1RMZ1 405 aa17.07■□□□□ 0.32
CLK3P2-201ENST00000427566 ISM2Q6H9L7 571 aa17.07■□□□□ 0.32
CLK3P2-201ENST00000427566 KIAA1841Q6NSI8 718 aa17.07■□□□□ 0.32
CLK3P2-201ENST00000427566 CRELD2Q6UXH1 353 aaPredicted RBP17.07■□□□□ 0.32
CLK3P2-201ENST00000427566 STXBP4Q6ZWJ1 553 aa17.07■□□□□ 0.32
CLK3P2-201ENST00000427566 SPATA20Q8TB22 786 aa17.07■□□□□ 0.32
CLK3P2-201ENST00000427566 APOL5Q9BWW9 433 aa17.07■□□□□ 0.32
CLK3P2-201ENST00000427566 CPSF3Q9UKF6 684 aaKnown RBP17.07■□□□□ 0.32
CLK3P2-201ENST00000427566 ANK1P16157 1881 aa17.07■□□□□ 0.32
CLK3P2-201ENST00000427566 SMIM28A0A1B0GU29 152 aa17.06■□□□□ 0.32
CLK3P2-201ENST00000427566 GOLGA8IPA6NC78 632 aa17.06■□□□□ 0.32
CLK3P2-201ENST00000427566 GOLGA8JA6NMD2 632 aa17.06■□□□□ 0.32
CLK3P2-201ENST00000427566 TULP1O00294 542 aaPredicted RBP17.06■□□□□ 0.32
CLK3P2-201ENST00000427566 CLIC2O15247 247 aa17.06■□□□□ 0.32
CLK3P2-201ENST00000427566 SOD2P04179 222 aa17.06■□□□□ 0.32
CLK3P2-201ENST00000427566 CLTAP09496 248 aa17.06■□□□□ 0.32
CLK3P2-201ENST00000427566 IGFBP6P24592 240 aaPredicted RBP17.06■□□□□ 0.32
CLK3P2-201ENST00000427566 SOX4Q06945 474 aaPredicted RBP17.06■□□□□ 0.32
CLK3P2-201ENST00000427566 KNOP1Q1ED39 458 aaKnown RBP17.06■□□□□ 0.32
CLK3P2-201ENST00000427566 XKR4Q5GH76 650 aa17.06■□□□□ 0.32
CLK3P2-201ENST00000427566 SLFN12LQ6IEE8 588 aa17.06■□□□□ 0.32
CLK3P2-201ENST00000427566 FUT10Q6P4F1 479 aa17.06■□□□□ 0.32
CLK3P2-201ENST00000427566 TAS1R1Q7RTX1 841 aa17.06■□□□□ 0.32
CLK3P2-201ENST00000427566 ELOA2Q8IYF1 753 aaPredicted RBP17.06■□□□□ 0.32
CLK3P2-201ENST00000427566 VN1R2Q8NFZ6 395 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms