RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 XKR4Q5GH76 650 aa14.88□□□□□ -0.03
SNX3-204ENST00000426155 HERC4Q5GLZ8 1057 aaPredicted RBP14.88□□□□□ -0.03
SNX3-204ENST00000426155 ANKRD54Q6NXT1 300 aa14.88□□□□□ -0.03
SNX3-204ENST00000426155 SYCE2Q6PIF2 218 aa14.88□□□□□ -0.03
SNX3-204ENST00000426155 ZNF720Q7Z2F6 126 aa14.88□□□□□ -0.03
SNX3-204ENST00000426155 GRAMD1CQ8IYS0 662 aa14.88□□□□□ -0.03
SNX3-204ENST00000426155 SPATA32Q96LK8 384 aa14.88□□□□□ -0.03
SNX3-204ENST00000426155 KLHL5Q96PQ7 755 aa14.88□□□□□ -0.03
SNX3-204ENST00000426155 STRA6Q9BX79 667 aa14.88□□□□□ -0.03
SNX3-204ENST00000426155 TNMDQ9H2S6 317 aa14.88□□□□□ -0.03
SNX3-204ENST00000426155 ST6GALNAC4Q9H4F1 302 aa14.88□□□□□ -0.03
SNX3-204ENST00000426155 GDPD2Q9HCC8 539 aa14.88□□□□□ -0.03
SNX3-204ENST00000426155 MRPL17Q9NRX2 175 aaKnown RBP14.88□□□□□ -0.03
SNX3-204ENST00000426155 PANK4Q9NVE7 773 aa14.88□□□□□ -0.03
SNX3-204ENST00000426155 KBTBD4Q9NVX7 518 aa14.88□□□□□ -0.03
SNX3-204ENST00000426155 CNTN3Q9P232 1028 aa14.88□□□□□ -0.03
SNX3-204ENST00000426155 TUBGCP4Q9UGJ1 667 aa14.88□□□□□ -0.03
SNX3-204ENST00000426155 I3L4J1 428 aa14.87□□□□□ -0.03
SNX3-204ENST00000426155 GCNT3O95395 438 aa14.87□□□□□ -0.03
SNX3-204ENST00000426155 GAP43P17677 238 aa14.87□□□□□ -0.03
SNX3-204ENST00000426155 RPL17P18621 184 aaKnown RBP14.87□□□□□ -0.03
SNX3-204ENST00000426155 BMS1Q14692 1282 aaKnown RBP14.87□□□□□ -0.03
SNX3-204ENST00000426155 SMAD2Q15796 467 aaKnown RBP14.87□□□□□ -0.03
SNX3-204ENST00000426155 RTP2Q5QGT7 225 aa14.87□□□□□ -0.03
SNX3-204ENST00000426155 KIAA0319Q5VV43 1072 aa14.87□□□□□ -0.03
SNX3-204ENST00000426155 CD300LGQ6UXG3 332 aa14.87□□□□□ -0.03
SNX3-204ENST00000426155 TMEM184AQ6ZMB5 413 aa14.87□□□□□ -0.03
SNX3-204ENST00000426155 GLYCTKQ8IVS8 523 aa14.87□□□□□ -0.03
SNX3-204ENST00000426155 C12orf76Q8N812 135 aaPredicted RBP14.87□□□□□ -0.03
SNX3-204ENST00000426155 TMEM87AQ8NBN3 555 aa14.87□□□□□ -0.03
SNX3-204ENST00000426155 SLC22A17Q8WUG5 538 aa14.87□□□□□ -0.03
SNX3-204ENST00000426155 MSTO1Q9BUK6 570 aa14.87□□□□□ -0.03
SNX3-204ENST00000426155 TRIM9Q9C026 710 aa14.87□□□□□ -0.03
SNX3-204ENST00000426155 BLZF1Q9H2G9 400 aa14.87□□□□□ -0.03
SNX3-204ENST00000426155 CHST7Q9NS84 486 aa14.87□□□□□ -0.03
SNX3-204ENST00000426155 FAM13BQ9NYF5 915 aa14.87□□□□□ -0.03
SNX3-204ENST00000426155 SEL1LQ9UBV2 794 aa14.87□□□□□ -0.03
SNX3-204ENST00000426155 USP15Q9Y4E8 981 aaPredicted RBP14.87□□□□□ -0.03
SNX3-204ENST00000426155 SF3B1O75533 1304 aaKnown RBP eCLIP14.87□□□□□ -0.032e-7■■■■■ 41.4
SNX3-204ENST00000426155 TSC2P49815 1807 aa14.87□□□□□ -0.03
SNX3-204ENST00000426155 A0A0B4J269 797 aa14.86□□□□□ -0.03
SNX3-204ENST00000426155 A0A1B0GVL5 298 aa14.86□□□□□ -0.03
SNX3-204ENST00000426155 TNFRSF10AO00220 468 aa14.86□□□□□ -0.03
SNX3-204ENST00000426155 TEX28O15482 410 aa14.86□□□□□ -0.03
SNX3-204ENST00000426155 WEE2P0C1S8 567 aa14.86□□□□□ -0.03
SNX3-204ENST00000426155 KCNE1P15382 129 aa14.86□□□□□ -0.03
SNX3-204ENST00000426155 PFKFB1P16118 471 aa14.86□□□□□ -0.03
SNX3-204ENST00000426155 KLRC2P26717 231 aa14.86□□□□□ -0.03
SNX3-204ENST00000426155 AFMP43652 599 aa14.86□□□□□ -0.03
SNX3-204ENST00000426155 BRCC3P46736 316 aa14.86□□□□□ -0.03
SNX3-204ENST00000426155 GUCY2FP51841 1108 aa14.86□□□□□ -0.03
SNX3-204ENST00000426155 ASIC1P78348 528 aa14.86□□□□□ -0.03
SNX3-204ENST00000426155 DSG1Q02413 1049 aa14.86□□□□□ -0.03
SNX3-204ENST00000426155 ENOX2Q16206 610 aaKnown RBP14.86□□□□□ -0.03
SNX3-204ENST00000426155 UPP1Q16831 310 aa14.86□□□□□ -0.03
SNX3-204ENST00000426155 PUS10Q3MIT2 529 aaKnown RBP14.86□□□□□ -0.03
SNX3-204ENST00000426155 L1TD1Q5T7N2 865 aaKnown RBP14.86□□□□□ -0.03
SNX3-204ENST00000426155 FAM171A1Q5VUB5 890 aa14.86□□□□□ -0.03
SNX3-204ENST00000426155 KIAA1841Q6NSI8 718 aa14.86□□□□□ -0.03
SNX3-204ENST00000426155 PRSS55Q6UWB4 352 aaPredicted RBP14.86□□□□□ -0.03
SNX3-204ENST00000426155 IQUBQ8NA54 791 aa14.86□□□□□ -0.03
SNX3-204ENST00000426155 ZSWIM2Q8NEG5 633 aa14.86□□□□□ -0.03
SNX3-204ENST00000426155 RIN2Q8WYP3 895 aaPredicted RBP14.86□□□□□ -0.03
SNX3-204ENST00000426155 CASP10Q92851 521 aa14.86□□□□□ -0.03
SNX3-204ENST00000426155 KHSRPQ92945 711 aaKnown RBP eCLIP14.86□□□□□ -0.03
SNX3-204ENST00000426155 CUEDC2Q9H467 287 aa14.86□□□□□ -0.03
SNX3-204ENST00000426155 OLFML3Q9NRN5 406 aa14.86□□□□□ -0.03
SNX3-204ENST00000426155 SERTAD1Q9UHV2 236 aa14.86□□□□□ -0.03
SNX3-204ENST00000426155 FSD2A1L4K1 749 aa14.85□□□□□ -0.03
SNX3-204ENST00000426155 PODXLO00592 558 aa14.85□□□□□ -0.03
SNX3-204ENST00000426155 OGTO15294 1046 aa14.85□□□□□ -0.03
SNX3-204ENST00000426155 B3GAT3O94766 335 aa14.85□□□□□ -0.03
SNX3-204ENST00000426155 PRPF6O94906 941 aaKnown RBP14.85□□□□□ -0.03
SNX3-204ENST00000426155 CLTAP09496 248 aa14.85□□□□□ -0.03
SNX3-204ENST00000426155 SRGAP2BP0DMP2 458 aa14.85□□□□□ -0.03
SNX3-204ENST00000426155 ADSSP30520 456 aa14.85□□□□□ -0.03
SNX3-204ENST00000426155 ACOT2P49753 483 aa14.85□□□□□ -0.03
SNX3-204ENST00000426155 CLCN4P51793 760 aa14.85□□□□□ -0.03
SNX3-204ENST00000426155 ZP2Q05996 745 aa14.85□□□□□ -0.03
SNX3-204ENST00000426155 USP41Q3LFD5 358 aa14.85□□□□□ -0.03
SNX3-204ENST00000426155 ADALQ6DHV7 355 aa14.85□□□□□ -0.03
SNX3-204ENST00000426155 CEP57Q86XR8 500 aa14.85□□□□□ -0.03
SNX3-204ENST00000426155 CCDC65Q8IXS2 484 aa14.85□□□□□ -0.03
SNX3-204ENST00000426155 HVCN1Q96D96 273 aa14.85□□□□□ -0.03
SNX3-204ENST00000426155 FAM212AQ96EL1 285 aa14.85□□□□□ -0.03
SNX3-204ENST00000426155 KIF12Q96FN5 646 aa14.85□□□□□ -0.03
SNX3-204ENST00000426155 EMILIN2Q9BXX0 1053 aa14.85□□□□□ -0.03
SNX3-204ENST00000426155 S1PR5Q9H228 398 aa14.85□□□□□ -0.03
SNX3-204ENST00000426155 STK39Q9UEW8 545 aa14.85□□□□□ -0.03
SNX3-204ENST00000426155 CPSF3Q9UKF6 684 aaKnown RBP14.85□□□□□ -0.03
SNX3-204ENST00000426155 KCNH3Q9ULD8 1083 aa14.85□□□□□ -0.03
SNX3-204ENST00000426155 SCN1AP35498 2009 aa14.84□□□□□ -0.03
SNX3-204ENST00000426155 TTC26A0AVF1 554 aa14.84□□□□□ -0.03
SNX3-204ENST00000426155 LACTBL1A8MY62 500 aa14.84□□□□□ -0.03
SNX3-204ENST00000426155 TMEM189-UBE2V1I3L0A0 370 aa14.84□□□□□ -0.03
SNX3-204ENST00000426155 ACTN4O43707 911 aaKnown RBP14.84□□□□□ -0.03
SNX3-204ENST00000426155 SPATA31D3P0C874 917 aa14.84□□□□□ -0.03
SNX3-204ENST00000426155 SCP2P22307 547 aa14.84□□□□□ -0.03
SNX3-204ENST00000426155 SP100P23497 879 aaPredicted RBP14.84□□□□□ -0.03
SNX3-204ENST00000426155 SSTR3P32745 418 aaPredicted RBP14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms