RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 RINT1Q6NUQ1 792 aa13.98□□□□□ -0.17
SGCE-203ENST00000425444 C15orf39Q6ZRI6 1047 aa13.98□□□□□ -0.17
SGCE-203ENST00000425444 KCNK18Q7Z418 384 aa13.98□□□□□ -0.17
SGCE-203ENST00000425444 DDX53Q86TM3 631 aaKnown RBP13.98□□□□□ -0.17
SGCE-203ENST00000425444 STAMQ92783 540 aa13.98□□□□□ -0.17
SGCE-203ENST00000425444 NXPE3Q969Y0 559 aa13.98□□□□□ -0.17
SGCE-203ENST00000425444 CALML4Q96GE6 196 aa13.98□□□□□ -0.17
SGCE-203ENST00000425444 CCDC113Q9H0I3 377 aa13.98□□□□□ -0.17
SGCE-203ENST00000425444 KMT5AQ9NQR1 393 aa13.98□□□□□ -0.17
SGCE-203ENST00000425444 KLK14Q9P0G3 267 aa13.98□□□□□ -0.17
SGCE-203ENST00000425444 STK39Q9UEW8 545 aa13.98□□□□□ -0.17
SGCE-203ENST00000425444 FBXO4Q9UKT5 387 aa13.98□□□□□ -0.17
SGCE-203ENST00000425444 TTLL13PA6NNM8 815 aa13.97□□□□□ -0.17
SGCE-203ENST00000425444 K7ERI5 159 aa13.97□□□□□ -0.17
SGCE-203ENST00000425444 EDN1P05305 212 aa13.97□□□□□ -0.17
SGCE-203ENST00000425444 HOXB3P14651 431 aaPredicted RBP13.97□□□□□ -0.17
SGCE-203ENST00000425444 SYT1P21579 422 aa13.97□□□□□ -0.17
SGCE-203ENST00000425444 TGM1P22735 817 aa13.97□□□□□ -0.17
SGCE-203ENST00000425444 NPTX2P47972 431 aa13.97□□□□□ -0.17
SGCE-203ENST00000425444 GRIK3Q13003 919 aa13.97□□□□□ -0.17
SGCE-203ENST00000425444 DCAF4L1Q3SXM0 396 aa13.97□□□□□ -0.17
SGCE-203ENST00000425444 HYIQ5T013 277 aa13.97□□□□□ -0.17
SGCE-203ENST00000425444 ATF7IP2Q5U623 682 aa13.97□□□□□ -0.17
SGCE-203ENST00000425444 APBB1IPQ7Z5R6 666 aaPredicted RBP13.97□□□□□ -0.17
SGCE-203ENST00000425444 KCTD17Q8N5Z5 321 aa13.97□□□□□ -0.17
SGCE-203ENST00000425444 INTS4Q96HW7 963 aaKnown RBP13.97□□□□□ -0.17
SGCE-203ENST00000425444 PNMA5Q96PV4 448 aa13.97□□□□□ -0.17
SGCE-203ENST00000425444 MYADMQ96S97 322 aa13.97□□□□□ -0.17
SGCE-203ENST00000425444 TIPINQ9BVW5 301 aa13.97□□□□□ -0.17
SGCE-203ENST00000425444 BCO2Q9BYV7 579 aa13.97□□□□□ -0.17
SGCE-203ENST00000425444 EPC1Q9H2F5 836 aa13.97□□□□□ -0.17
SGCE-203ENST00000425444 SNTG2Q9NY99 539 aa13.97□□□□□ -0.17
SGCE-203ENST00000425444 EPS15L1Q9UBC2 864 aa13.97□□□□□ -0.17
SGCE-203ENST00000425444 USP20Q9Y2K6 914 aa13.97□□□□□ -0.17
SGCE-203ENST00000425444 ZMYM2Q9UBW7 1377 aa13.96□□□□□ -0.17
SGCE-203ENST00000425444 INPPL1O15357 1258 aa13.96□□□□□ -0.17
SGCE-203ENST00000425444 PLA2G4BP0C869 781 aa13.96□□□□□ -0.17
SGCE-203ENST00000425444 LONP1P36776 959 aaKnown RBP13.96□□□□□ -0.17
SGCE-203ENST00000425444 TMEM119Q4V9L6 283 aa13.96□□□□□ -0.17
SGCE-203ENST00000425444 C1orf186Q6ZWK4 172 aa13.96□□□□□ -0.17
SGCE-203ENST00000425444 HSCBQ8IWL3 235 aa13.96□□□□□ -0.17
SGCE-203ENST00000425444 COLGALT2Q8IYK4 626 aa13.96□□□□□ -0.17
SGCE-203ENST00000425444 DAW1Q8N136 415 aa13.96□□□□□ -0.17
SGCE-203ENST00000425444 SHDQ96IW2 340 aa13.96□□□□□ -0.17
SGCE-203ENST00000425444 EMILIN2Q9BXX0 1053 aa13.96□□□□□ -0.17
SGCE-203ENST00000425444 C17orf75Q9HAS0 396 aa13.96□□□□□ -0.17
SGCE-203ENST00000425444 WDR6Q9NNW5 1121 aaKnown RBP13.96□□□□□ -0.17
SGCE-203ENST00000425444 PARD6AQ9NPB6 346 aa13.96□□□□□ -0.17
SGCE-203ENST00000425444 ZSCAN32Q9NX65 697 aa13.96□□□□□ -0.17
SGCE-203ENST00000425444 MIOSQ9NXC5 875 aa13.96□□□□□ -0.17
SGCE-203ENST00000425444 GMEB2Q9UKD1 530 aa13.96□□□□□ -0.17
SGCE-203ENST00000425444 ANGPTL2Q9UKU9 493 aa13.96□□□□□ -0.17
SGCE-203ENST00000425444 WDFY3Q8IZQ1 3526 aa13.95□□□□□ -0.18
SGCE-203ENST00000425444 SLC30A4O14863 429 aa13.95□□□□□ -0.18
SGCE-203ENST00000425444 SLC26A4O43511 780 aa13.95□□□□□ -0.18
SGCE-203ENST00000425444 RECQL4O94761 1208 aa13.95□□□□□ -0.18
SGCE-203ENST00000425444 URODP06132 367 aa13.95□□□□□ -0.18
SGCE-203ENST00000425444 GUCY2CP25092 1073 aa13.95□□□□□ -0.18
SGCE-203ENST00000425444 CLCN4P51793 760 aa13.95□□□□□ -0.18
SGCE-203ENST00000425444 SLC12A3P55017 1021 aa13.95□□□□□ -0.18
SGCE-203ENST00000425444 CACNB1Q02641 598 aaPredicted RBP13.95□□□□□ -0.18
SGCE-203ENST00000425444 DSC1Q08554 894 aa13.95□□□□□ -0.18
SGCE-203ENST00000425444 RESTQ13127 1097 aa13.95□□□□□ -0.18
SGCE-203ENST00000425444 DHX8Q14562 1220 aaKnown RBP13.95□□□□□ -0.18
SGCE-203ENST00000425444 ZNF568Q3ZCX4 644 aa13.95□□□□□ -0.18
SGCE-203ENST00000425444 EEF1DP3Q658K8 133 aa13.95□□□□□ -0.18
SGCE-203ENST00000425444 SYT2Q8N9I0 419 aaPredicted RBP13.95□□□□□ -0.18
SGCE-203ENST00000425444 ZBTB44Q8NCP5 570 aa13.95□□□□□ -0.18
SGCE-203ENST00000425444 NETO1Q8TDF5 533 aa13.95□□□□□ -0.18
SGCE-203ENST00000425444 COLEC11Q9BWP8 271 aa13.95□□□□□ -0.18
SGCE-203ENST00000425444 VN1R3Q9BXE9 311 aa13.95□□□□□ -0.18
SGCE-203ENST00000425444 MRPL4Q9BYD3 311 aaKnown RBP13.95□□□□□ -0.18
SGCE-203ENST00000425444 MARCH5Q9NX47 278 aa13.95□□□□□ -0.18
SGCE-203ENST00000425444 KCND2Q9NZV8 630 aa13.95□□□□□ -0.18
SGCE-203ENST00000425444 GDAQ9Y2T3 454 aa13.95□□□□□ -0.18
SGCE-203ENST00000425444 RBM19Q9Y4C8 960 aaKnown RBP13.95□□□□□ -0.18
SGCE-203ENST00000425444 CLUHO75153 1309 aa13.94□□□□□ -0.18
SGCE-203ENST00000425444 CCDC195A0A1B0GUA6 201 aa13.94□□□□□ -0.18
SGCE-203ENST00000425444 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.94□□□□□ -0.18
SGCE-203ENST00000425444 SFI1A8K8P3 1242 aa13.94□□□□□ -0.18
SGCE-203ENST00000425444 C2CD2LO14523 706 aa13.94□□□□□ -0.18
SGCE-203ENST00000425444 SLC16A4O15374 487 aa13.94□□□□□ -0.18
SGCE-203ENST00000425444 TBC1D4O60343 1298 aa13.94□□□□□ -0.18
SGCE-203ENST00000425444 SOD2P04179 222 aa13.94□□□□□ -0.18
SGCE-203ENST00000425444 KRT18P05783 430 aaKnown RBP13.94□□□□□ -0.18
SGCE-203ENST00000425444 HSP90AA1P07900 732 aaKnown RBP13.94□□□□□ -0.18
SGCE-203ENST00000425444 CNPP09543 421 aaKnown RBP13.94□□□□□ -0.18
SGCE-203ENST00000425444 SMTNP53814 917 aa13.94□□□□□ -0.18
SGCE-203ENST00000425444 STARD6P59095 220 aa13.94□□□□□ -0.18
SGCE-203ENST00000425444 CEBPZQ03701 1054 aaKnown RBP13.94□□□□□ -0.18
SGCE-203ENST00000425444 GRIN1Q05586 938 aa13.94□□□□□ -0.18
SGCE-203ENST00000425444 SPEM2Q0P670 501 aa13.94□□□□□ -0.18
SGCE-203ENST00000425444 STRN3Q13033 797 aa13.94□□□□□ -0.18
SGCE-203ENST00000425444 MAPK7Q13164 816 aa13.94□□□□□ -0.18
SGCE-203ENST00000425444 NT5DC1Q5TFE4 455 aa13.94□□□□□ -0.18
SGCE-203ENST00000425444 FAM173BQ6P4H8 233 aa13.94□□□□□ -0.18
SGCE-203ENST00000425444 ST13P5Q8NFI4 369 aaPredicted RBP13.94□□□□□ -0.18
SGCE-203ENST00000425444 COL26A1Q96A83 441 aa13.94□□□□□ -0.18
SGCE-203ENST00000425444 KLHL5Q96PQ7 755 aa13.94□□□□□ -0.18
SGCE-203ENST00000425444 HERC2P3Q9BVR0 1158 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms