RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 MFSD5Q6N075 450 aa14.56□□□□□ -0.08
PRPF39-202ENST00000424478 TMC6Q7Z403 805 aa14.56□□□□□ -0.08
PRPF39-202ENST00000424478 ECHDC2Q86YB7 292 aa14.56□□□□□ -0.08
PRPF39-202ENST00000424478 USP38Q8NB14 1042 aa14.56□□□□□ -0.08
PRPF39-202ENST00000424478 PAAF1Q9BRP4 392 aa14.56□□□□□ -0.08
PRPF39-202ENST00000424478 MICAL3Q7RTP6 2002 aa14.55□□□□□ -0.08
PRPF39-202ENST00000424478 RNF225M0QZC1 329 aaPredicted RBP14.55□□□□□ -0.08
PRPF39-202ENST00000424478 PTGESO14684 152 aa14.55□□□□□ -0.08
PRPF39-202ENST00000424478 B4GALT3O60512 393 aa14.55□□□□□ -0.08
PRPF39-202ENST00000424478 PPP2R3AQ06190 1150 aa14.55□□□□□ -0.08
PRPF39-202ENST00000424478 FOXR2Q6PJQ5 311 aa14.55□□□□□ -0.08
PRPF39-202ENST00000424478 GSTCDQ8NEC7 633 aa14.55□□□□□ -0.08
PRPF39-202ENST00000424478 SNX27Q96L92 541 aa14.55□□□□□ -0.08
PRPF39-202ENST00000424478 METTL14Q9HCE5 456 aaKnown RBP14.55□□□□□ -0.08
PRPF39-202ENST00000424478 RGS18Q9NS28 235 aa14.55□□□□□ -0.08
PRPF39-202ENST00000424478 CXXC1Q9P0U4 656 aaPredicted RBP14.55□□□□□ -0.08
PRPF39-202ENST00000424478 ARL5CA6NH57 179 aa14.55□□□□□ -0.08
PRPF39-202ENST00000424478 LRRC10BA6NIK2 292 aa14.55□□□□□ -0.08
PRPF39-202ENST00000424478 ZBBXA8MT70 800 aa14.55□□□□□ -0.08
PRPF39-202ENST00000424478 PNMA6AP0CW24 399 aaPredicted RBP14.55□□□□□ -0.08
PRPF39-202ENST00000424478 PBX3P40426 434 aa14.55□□□□□ -0.08
PRPF39-202ENST00000424478 MYBPC2Q14324 1141 aa14.55□□□□□ -0.08
PRPF39-202ENST00000424478 AJAP1Q9UKB5 411 aaPredicted RBP14.55□□□□□ -0.08
PRPF39-202ENST00000424478 CXCL10P02778 98 aa14.55□□□□□ -0.08
PRPF39-202ENST00000424478 YARSP54577 528 aaKnown RBP14.55□□□□□ -0.08
PRPF39-202ENST00000424478 MYL7Q01449 175 aa14.55□□□□□ -0.08
PRPF39-202ENST00000424478 CLLU1OSQ5K130 101 aa14.55□□□□□ -0.08
PRPF39-202ENST00000424478 SARM1Q6SZW1 724 aa14.55□□□□□ -0.08
PRPF39-202ENST00000424478 ZNF365Q70YC5 407 aa14.55□□□□□ -0.08
PRPF39-202ENST00000424478 SLC24A5Q71RS6 500 aa14.55□□□□□ -0.08
PRPF39-202ENST00000424478 TSPYL2Q9H2G4 693 aaPredicted RBP14.55□□□□□ -0.08
PRPF39-202ENST00000424478 CHST12Q9NRB3 414 aa14.55□□□□□ -0.08
PRPF39-202ENST00000424478 GCNT4Q9P109 453 aa14.55□□□□□ -0.08
PRPF39-202ENST00000424478 SCN1AP35498 2009 aa14.54□□□□□ -0.08
PRPF39-202ENST00000424478 TTC3P53804 2025 aa14.54□□□□□ -0.08
PRPF39-202ENST00000424478 SMIM28A0A1B0GU29 152 aa14.54□□□□□ -0.08
PRPF39-202ENST00000424478 MXI1P50539 228 aa14.54□□□□□ -0.08
PRPF39-202ENST00000424478 ZNF710Q8N1W2 664 aa14.54□□□□□ -0.08
PRPF39-202ENST00000424478 HASPINQ8TF76 798 aa14.54□□□□□ -0.08
PRPF39-202ENST00000424478 KAT5Q92993 513 aa14.54□□□□□ -0.08
PRPF39-202ENST00000424478 VNN1O95497 513 aa14.54□□□□□ -0.08
PRPF39-202ENST00000424478 ITGB3P05106 788 aa14.54□□□□□ -0.08
PRPF39-202ENST00000424478 PCBP1Q15365 356 aaKnown RBP eCLIP14.54□□□□□ -0.08
PRPF39-202ENST00000424478 FILIP1LQ4L180 1135 aa14.54□□□□□ -0.08
PRPF39-202ENST00000424478 TMEM199Q8N511 208 aa14.54□□□□□ -0.08
PRPF39-202ENST00000424478 CGRRF1Q99675 332 aa14.54□□□□□ -0.08
PRPF39-202ENST00000424478 LSM14BQ9BX40 385 aaKnown RBP14.54□□□□□ -0.08
PRPF39-202ENST00000424478 KIAA1586Q9HCI6 787 aa14.54□□□□□ -0.08
PRPF39-202ENST00000424478 CASTOR2A6NHX0 329 aa14.53□□□□□ -0.08
PRPF39-202ENST00000424478 TMEM191BP0C7N4 346 aa14.53□□□□□ -0.08
PRPF39-202ENST00000424478 RRAGAQ7L523 313 aa14.53□□□□□ -0.08
PRPF39-202ENST00000424478 C1orf127Q8N9H9 656 aa14.53□□□□□ -0.08
PRPF39-202ENST00000424478 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.53□□□□□ -0.084e-8■■■■□ 20.1
PRPF39-202ENST00000424478 RSAD1Q9HA92 442 aa14.53□□□□□ -0.08
PRPF39-202ENST00000424478 PHACTR2O75167 634 aa14.53□□□□□ -0.08
PRPF39-202ENST00000424478 TMEM132DQ14C87 1099 aa14.53□□□□□ -0.08
PRPF39-202ENST00000424478 TRAPPC11Q7Z392 1133 aa14.53□□□□□ -0.08
PRPF39-202ENST00000424478 ZNF598Q86UK7 904 aaKnown RBP14.53□□□□□ -0.08
PRPF39-202ENST00000424478 ARID3AQ99856 593 aa14.53□□□□□ -0.08
PRPF39-202ENST00000424478 NLRC4Q9NPP4 1024 aa14.53□□□□□ -0.08
PRPF39-202ENST00000424478 SQORQ9Y6N5 450 aa14.53□□□□□ -0.08
PRPF39-202ENST00000424478 C4BPAP04003 597 aaKnown RBP14.53□□□□□ -0.08
PRPF39-202ENST00000424478 MYL6P60660 151 aa14.53□□□□□ -0.08
PRPF39-202ENST00000424478 ZNF280BQ86YH2 543 aa14.53□□□□□ -0.08
PRPF39-202ENST00000424478 TMEM174Q8WUU8 243 aa14.53□□□□□ -0.08
PRPF39-202ENST00000424478 SIX4Q9UIU6 781 aa14.53□□□□□ -0.08
PRPF39-202ENST00000424478 REV3LO60673 3130 aa14.52□□□□□ -0.08
PRPF39-202ENST00000424478 CALCAP01258 141 aa14.52□□□□□ -0.08
PRPF39-202ENST00000424478 TPM2P07951 284 aa14.52□□□□□ -0.08
PRPF39-202ENST00000424478 POLR2BP30876 1174 aaKnown RBP14.52□□□□□ -0.08
PRPF39-202ENST00000424478 IKBKEQ14164 716 aa14.52□□□□□ -0.08
PRPF39-202ENST00000424478 FKBP15Q5T1M5 1219 aa14.52□□□□□ -0.08
PRPF39-202ENST00000424478 ALKAL1Q6UXT8 129 aa14.52□□□□□ -0.08
PRPF39-202ENST00000424478 SCARA5Q6ZMJ2 495 aa14.52□□□□□ -0.08
PRPF39-202ENST00000424478 TMC2Q8TDI7 906 aa14.52□□□□□ -0.08
PRPF39-202ENST00000424478 TATDN2Q93075 761 aa14.52□□□□□ -0.08
PRPF39-202ENST00000424478 HTATIP2Q9BUP3 242 aa14.52□□□□□ -0.08
PRPF39-202ENST00000424478 HLA-DRAP01903 254 aa14.52□□□□□ -0.09
PRPF39-202ENST00000424478 PON1P27169 355 aa14.52□□□□□ -0.09
PRPF39-202ENST00000424478 PIK3CAP42336 1068 aa14.52□□□□□ -0.09
PRPF39-202ENST00000424478 FPGSQ05932 587 aa14.52□□□□□ -0.09
PRPF39-202ENST00000424478 CNKSR3Q6P9H4 555 aa14.52□□□□□ -0.09
PRPF39-202ENST00000424478 ARHGEF19Q8IW93 802 aa14.52□□□□□ -0.09
PRPF39-202ENST00000424478 CCDC51Q96ER9 411 aa14.52□□□□□ -0.09
PRPF39-202ENST00000424478 RPS6KC1Q96S38 1066 aa14.52□□□□□ -0.09
PRPF39-202ENST00000424478 SIK3Q9Y2K2 1263 aa14.52□□□□□ -0.09
PRPF39-202ENST00000424478 LTBP2Q14767 1821 aa14.52□□□□□ -0.09
PRPF39-202ENST00000424478 KIAA0391O15091 583 aaKnown RBP14.51□□□□□ -0.09
PRPF39-202ENST00000424478 ADKP55263 362 aaKnown RBP14.51□□□□□ -0.09
PRPF39-202ENST00000424478 EXOC3L4Q17RC7 722 aa14.51□□□□□ -0.09
PRPF39-202ENST00000424478 KRT39Q6A163 491 aa14.51□□□□□ -0.09
PRPF39-202ENST00000424478 DNAJB4Q9UDY4 337 aa14.51□□□□□ -0.09
PRPF39-202ENST00000424478 PCDHB7Q9Y5E2 793 aa14.51□□□□□ -0.09
PRPF39-202ENST00000424478 TDRD15B5MCY1 1934 aaKnown RBP14.51□□□□□ -0.09
PRPF39-202ENST00000424478 PTPRSQ13332 1948 aa14.51□□□□□ -0.09
PRPF39-202ENST00000424478 I3L4J1 428 aa14.51□□□□□ -0.09
PRPF39-202ENST00000424478 OFD1O75665 1012 aa14.51□□□□□ -0.09
PRPF39-202ENST00000424478 PBX1P40424 430 aa14.51□□□□□ -0.09
PRPF39-202ENST00000424478 DUOXA2Q1HG44 320 aa14.51□□□□□ -0.09
PRPF39-202ENST00000424478 ZACNQ401N2 412 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms