RNA–Protein interactions for RNA: ENST00000424443.7

TSPAN3-203, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-203ENST00000424443 COBLL1Q53SF7 1204 aa27.59■■■□□ 2.01
TSPAN3-203ENST00000424443 ZSWIM2Q8NEG5 633 aa27.59■■■□□ 2.01
TSPAN3-203ENST00000424443 IGSF21Q96ID5 467 aa27.59■■■□□ 2.01
TSPAN3-203ENST00000424443 UROC1Q96N76 676 aa27.59■■■□□ 2.01
TSPAN3-203ENST00000424443 GTF3C5Q9Y5Q8 519 aaPredicted RBP27.59■■■□□ 2.01
TSPAN3-203ENST00000424443 CHD7Q9P2D1 2997 aa27.59■■■□□ 2.01
TSPAN3-203ENST00000424443 COL4A4P53420 1690 aaPredicted RBP27.58■■■□□ 2.01
TSPAN3-203ENST00000424443 GRM6O15303 877 aa27.58■■■□□ 2.01
TSPAN3-203ENST00000424443 MEFVO15553 781 aaPredicted RBP27.58■■■□□ 2.01
TSPAN3-203ENST00000424443 NAB2Q15742 525 aa27.58■■■□□ 2.01
TSPAN3-203ENST00000424443 BRSK2Q8IWQ3 736 aa27.58■■■□□ 2.01
TSPAN3-203ENST00000424443 TRIML1Q8N9V2 468 aa27.58■■■□□ 2.01
TSPAN3-203ENST00000424443 RDH13Q8NBN7 331 aa27.58■■■□□ 2.01
TSPAN3-203ENST00000424443 SPPL3Q8TCT6 385 aa27.58■■■□□ 2.01
TSPAN3-203ENST00000424443 POF1BQ8WVV4 589 aa27.58■■■□□ 2.01
TSPAN3-203ENST00000424443 UBQLN1Q9UMX0 589 aaKnown RBP27.58■■■□□ 2.01
TSPAN3-203ENST00000424443 TRAF3IP3Q9Y228 551 aa27.58■■■□□ 2.01
TSPAN3-203ENST00000424443 CDH23Q9H251 3354 aa27.58■■■□□ 2.01
TSPAN3-203ENST00000424443 ADRB2P07550 413 aa27.57■■■□□ 2
TSPAN3-203ENST00000424443 MORC3Q14149 939 aa27.57■■■□□ 2
TSPAN3-203ENST00000424443 TSG101Q99816 390 aa27.57■■■□□ 2
TSPAN3-203ENST00000424443 LMCD1Q9NZU5 365 aa27.57■■■□□ 2
TSPAN3-203ENST00000424443 LZTS1Q9Y250 596 aa27.57■■■□□ 2
TSPAN3-203ENST00000424443 PSMA7O14818 248 aa27.57■■■□□ 2
TSPAN3-203ENST00000424443 LPXNO60711 386 aa27.57■■■□□ 2
TSPAN3-203ENST00000424443 TADA2AO75478 443 aa27.57■■■□□ 2
TSPAN3-203ENST00000424443 CSPG5O95196 566 aa27.57■■■□□ 2
TSPAN3-203ENST00000424443 NR3C1P04150 777 aa27.57■■■□□ 2
TSPAN3-203ENST00000424443 TMEM132DQ14C87 1099 aa27.57■■■□□ 2
TSPAN3-203ENST00000424443 SNRNP35Q16560 246 aaKnown RBP27.57■■■□□ 2
TSPAN3-203ENST00000424443 JADE1Q6IE81 842 aa27.57■■■□□ 2
TSPAN3-203ENST00000424443 BEST2Q8NFU1 509 aa27.57■■■□□ 2
TSPAN3-203ENST00000424443 C18orf25Q96B23 403 aaPredicted RBP27.57■■■□□ 2
TSPAN3-203ENST00000424443 DDX27Q96GQ7 796 aaKnown RBP27.57■■■□□ 2
TSPAN3-203ENST00000424443 GOLGA2P5Q9HBQ8 144 aa27.57■■■□□ 2
TSPAN3-203ENST00000424443 STK39Q9UEW8 545 aa27.57■■■□□ 2
TSPAN3-203ENST00000424443 DERAQ9Y315 318 aa27.57■■■□□ 2
TSPAN3-203ENST00000424443 PTMSP20962 102 aa27.56■■■□□ 2
TSPAN3-203ENST00000424443 RPL13P26373 211 aaKnown RBP27.56■■■□□ 2
TSPAN3-203ENST00000424443 ADGRE1Q14246 886 aa27.56■■■□□ 2
TSPAN3-203ENST00000424443 BMS1Q14692 1282 aaKnown RBP27.56■■■□□ 2
TSPAN3-203ENST00000424443 SURF1Q15526 300 aa27.56■■■□□ 2
TSPAN3-203ENST00000424443 TMEM173Q86WV6 379 aaPredicted RBP27.56■■■□□ 2
TSPAN3-203ENST00000424443 CBWD2Q8IUF1 395 aa27.56■■■□□ 2
TSPAN3-203ENST00000424443 SLC9A9Q8IVB4 645 aa27.56■■■□□ 2
TSPAN3-203ENST00000424443 ADSSL1Q8N142 457 aa27.56■■■□□ 2
TSPAN3-203ENST00000424443 MICAL1Q8TDZ2 1067 aa27.56■■■□□ 2
TSPAN3-203ENST00000424443 RABGGTAQ92696 567 aa27.56■■■□□ 2
TSPAN3-203ENST00000424443 MRPL38Q96DV4 380 aaKnown RBP27.56■■■□□ 2
TSPAN3-203ENST00000424443 CACNG4Q9UBN1 327 aa27.56■■■□□ 2
TSPAN3-203ENST00000424443 C2CD2Q9Y426 696 aa27.56■■■□□ 2
TSPAN3-203ENST00000424443 CYP3A5P20815 502 aa27.55■■■□□ 2
TSPAN3-203ENST00000424443 CLCNKBP51801 687 aa27.55■■■□□ 2
TSPAN3-203ENST00000424443 MYBPC2Q14324 1141 aa27.55■■■□□ 2
TSPAN3-203ENST00000424443 FBXL18Q96ME1 805 aa27.55■■■□□ 2
TSPAN3-203ENST00000424443 PAAF1Q9BRP4 392 aa27.55■■■□□ 2
TSPAN3-203ENST00000424443 TLR9Q9NR96 1032 aa27.55■■■□□ 2
TSPAN3-203ENST00000424443 ADAM28Q9UKQ2 775 aa27.55■■■□□ 2
TSPAN3-203ENST00000424443 FRMD4BQ9Y2L6 1034 aa27.55■■■□□ 2
TSPAN3-203ENST00000424443 NR2F2P24468 414 aa27.54■■■□□ 2
TSPAN3-203ENST00000424443 RPL9P32969 192 aaKnown RBP27.54■■■□□ 2
TSPAN3-203ENST00000424443 SOX4Q06945 474 aaPredicted RBP27.54■■■□□ 2
TSPAN3-203ENST00000424443 DDX53Q86TM3 631 aaKnown RBP27.54■■■□□ 2
TSPAN3-203ENST00000424443 NT5DC4Q86YG4 428 aa27.54■■■□□ 2
TSPAN3-203ENST00000424443 MICALL1Q8N3F8 863 aa27.54■■■□□ 2
TSPAN3-203ENST00000424443 DHTKD1Q96HY7 919 aaPredicted RBP27.54■■■□□ 2
TSPAN3-203ENST00000424443 ENTPD7Q9NQZ7 604 aa27.54■■■□□ 2
TSPAN3-203ENST00000424443 TUBGCP4Q9UGJ1 667 aa27.54■■■□□ 2
TSPAN3-203ENST00000424443 PLXNA4Q9HCM2 1894 aa27.54■■■□□ 2
TSPAN3-203ENST00000424443 PDCD11Q14690 1871 aaKnown RBP27.53■■■□□ 2
TSPAN3-203ENST00000424443 B3GAT3O94766 335 aa27.53■■■□□ 2
TSPAN3-203ENST00000424443 NFICP08651 508 aa27.53■■■□□ 2
TSPAN3-203ENST00000424443 ZBTB6Q15916 424 aa27.53■■■□□ 2
TSPAN3-203ENST00000424443 CEP135Q66GS9 1140 aa27.53■■■□□ 2
TSPAN3-203ENST00000424443 KLHL10Q6JEL2 608 aa27.53■■■□□ 2
TSPAN3-203ENST00000424443 DCLRE1AQ6PJP8 1040 aa27.53■■■□□ 2
TSPAN3-203ENST00000424443 TMC7Q7Z402 723 aa27.53■■■□□ 2
TSPAN3-203ENST00000424443 CACTINQ8WUQ7 758 aaKnown RBP27.53■■■□□ 2
TSPAN3-203ENST00000424443 TMEM174Q8WUU8 243 aa27.53■■■□□ 2
TSPAN3-203ENST00000424443 BCL7CQ8WUZ0 217 aaPredicted RBP27.53■■■□□ 2
TSPAN3-203ENST00000424443 FNBP1Q96RU3 617 aa27.53■■■□□ 2
TSPAN3-203ENST00000424443 DMAC2Q9NW81 257 aa27.53■■■□□ 2
TSPAN3-203ENST00000424443 MARCH5Q9NX47 278 aa27.53■■■□□ 2
TSPAN3-203ENST00000424443 MTCH2Q9Y6C9 303 aa27.53■■■□□ 2
TSPAN3-203ENST00000424443 PODXLO00592 558 aa27.52■■■□□ 2
TSPAN3-203ENST00000424443 POU3F3P20264 500 aaPredicted RBP27.52■■■□□ 2
TSPAN3-203ENST00000424443 CA8P35219 290 aa27.52■■■□□ 2
TSPAN3-203ENST00000424443 ADAM9Q13443 819 aa27.52■■■□□ 2
TSPAN3-203ENST00000424443 NFIL3Q16649 462 aa27.52■■■□□ 2
TSPAN3-203ENST00000424443 UPP1Q16831 310 aa27.52■■■□□ 2
TSPAN3-203ENST00000424443 EDRF1Q3B7T1 1238 aa27.52■■■□□ 2
TSPAN3-203ENST00000424443 CENPPQ6IPU0 288 aa27.52■■■□□ 2
TSPAN3-203ENST00000424443 VPS52Q8N1B4 723 aa27.52■■■□□ 2
TSPAN3-203ENST00000424443 HASPINQ8TF76 798 aa27.52■■■□□ 2
TSPAN3-203ENST00000424443 PDE11AQ9HCR9 933 aa27.52■■■□□ 2
TSPAN3-203ENST00000424443 KIF4AO95239 1232 aa27.51■■■□□ 2
TSPAN3-203ENST00000424443 BMP6P22004 513 aa27.51■■■□□ 2
TSPAN3-203ENST00000424443 DNAJB1P25685 340 aa27.51■■■□□ 2
TSPAN3-203ENST00000424443 TFAMQ00059 246 aaKnown RBP27.51■■■□□ 2
TSPAN3-203ENST00000424443 TIGD5Q53EQ6 642 aa27.51■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms