RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 OLFML3Q9NRN5 406 aa11.94□□□□□ -0.5
USP49-204ENST00000423567 KBTBD4Q9NVX7 518 aa11.94□□□□□ -0.5
USP49-204ENST00000423567 TBC1D7Q9P0N9 293 aa11.94□□□□□ -0.5
USP49-204ENST00000423567 KCNH3Q9ULD8 1083 aa11.94□□□□□ -0.5
USP49-204ENST00000423567 BARX2Q9UMQ3 279 aaPredicted RBP11.94□□□□□ -0.5
USP49-204ENST00000423567 PLXNA4Q9HCM2 1894 aa11.93□□□□□ -0.5
USP49-204ENST00000423567 FRMD3A2A2Y4 597 aa11.93□□□□□ -0.5
USP49-204ENST00000423567 OGTO15294 1046 aa11.93□□□□□ -0.5
USP49-204ENST00000423567 XPOTO43592 962 aaKnown RBP11.93□□□□□ -0.5
USP49-204ENST00000423567 TRAPPC3O43617 180 aa11.93□□□□□ -0.5
USP49-204ENST00000423567 CLASP2O75122 1294 aaKnown RBP11.93□□□□□ -0.5
USP49-204ENST00000423567 PPP1R37O75864 691 aa11.93□□□□□ -0.5
USP49-204ENST00000423567 ADH1AP07327 375 aa11.93□□□□□ -0.5
USP49-204ENST00000423567 IL9P15248 144 aa11.93□□□□□ -0.5
USP49-204ENST00000423567 KCNE1P15382 129 aa11.93□□□□□ -0.5
USP49-204ENST00000423567 HOXB8P17481 243 aaPredicted RBP11.93□□□□□ -0.5
USP49-204ENST00000423567 KLRC2P26717 231 aa11.93□□□□□ -0.5
USP49-204ENST00000423567 COASYQ13057 564 aa11.93□□□□□ -0.5
USP49-204ENST00000423567 POSTNQ15063 836 aa11.93□□□□□ -0.5
USP49-204ENST00000423567 TPRNQ4KMQ1 711 aa11.93□□□□□ -0.5
USP49-204ENST00000423567 SEZ6Q53EL9 994 aa11.93□□□□□ -0.5
USP49-204ENST00000423567 XKR4Q5GH76 650 aa11.93□□□□□ -0.5
USP49-204ENST00000423567 L1TD1Q5T7N2 865 aaKnown RBP11.93□□□□□ -0.5
USP49-204ENST00000423567 DCLRE1AQ6PJP8 1040 aa11.93□□□□□ -0.5
USP49-204ENST00000423567 ALKAL1Q6UXT8 129 aa11.93□□□□□ -0.5
USP49-204ENST00000423567 TMEM184AQ6ZMB5 413 aa11.93□□□□□ -0.5
USP49-204ENST00000423567 RABGGTAQ92696 567 aa11.93□□□□□ -0.5
USP49-204ENST00000423567 TRIM9Q9C026 710 aa11.93□□□□□ -0.5
USP49-204ENST00000423567 RPF1Q9H9Y2 349 aaKnown RBP11.93□□□□□ -0.5
USP49-204ENST00000423567 PLEKHA5Q9HAU0 1116 aa11.93□□□□□ -0.5
USP49-204ENST00000423567 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.93□□□□□ -0.5
USP49-204ENST00000423567 DZANK1Q9NVP4 752 aa11.93□□□□□ -0.5
USP49-204ENST00000423567 CLEC1BQ9P126 229 aa11.93□□□□□ -0.5
USP49-204ENST00000423567 CNTN3Q9P232 1028 aa11.93□□□□□ -0.5
USP49-204ENST00000423567 DPP7Q9UHL4 492 aa11.93□□□□□ -0.5
USP49-204ENST00000423567 HCFC2Q9Y5Z7 792 aa11.93□□□□□ -0.5
USP49-204ENST00000423567 PRUNE2Q8WUY3 3088 aa11.92□□□□□ -0.5
USP49-204ENST00000423567 MYH15Q9Y2K3 1946 aa11.92□□□□□ -0.5
USP49-204ENST00000423567 A0A0B4J269 797 aa11.92□□□□□ -0.5
USP49-204ENST00000423567 F8W810 466 aa11.92□□□□□ -0.5
USP49-204ENST00000423567 MBTPS2O43462 519 aa11.92□□□□□ -0.5
USP49-204ENST00000423567 B3GAT3O94766 335 aa11.92□□□□□ -0.5
USP49-204ENST00000423567 KIF4AO95239 1232 aa11.92□□□□□ -0.5
USP49-204ENST00000423567 GLP2RO95838 553 aa11.92□□□□□ -0.5
USP49-204ENST00000423567 CXCL8P10145 99 aa11.92□□□□□ -0.5
USP49-204ENST00000423567 CMA1P23946 247 aa11.92□□□□□ -0.5
USP49-204ENST00000423567 RPL9P32969 192 aaKnown RBP11.92□□□□□ -0.5
USP49-204ENST00000423567 DSG1Q02413 1049 aa11.92□□□□□ -0.5
USP49-204ENST00000423567 NAB2Q15742 525 aa11.92□□□□□ -0.5
USP49-204ENST00000423567 FAM171A1Q5VUB5 890 aa11.92□□□□□ -0.5
USP49-204ENST00000423567 ANKRD54Q6NXT1 300 aa11.92□□□□□ -0.5
USP49-204ENST00000423567 PDXDC1Q6P996 788 aa11.92□□□□□ -0.5
USP49-204ENST00000423567 CD302Q8IX05 232 aa11.92□□□□□ -0.5
USP49-204ENST00000423567 GPR65Q8IYL9 337 aa11.92□□□□□ -0.5
USP49-204ENST00000423567 RNF168Q8IYW5 571 aaPredicted RBP11.92□□□□□ -0.5
USP49-204ENST00000423567 VN1R2Q8NFZ6 395 aa11.92□□□□□ -0.5
USP49-204ENST00000423567 HASPINQ8TF76 798 aa11.92□□□□□ -0.5
USP49-204ENST00000423567 RIN2Q8WYP3 895 aaPredicted RBP11.92□□□□□ -0.5
USP49-204ENST00000423567 POMGNT1Q8WZA1 660 aa11.92□□□□□ -0.5
USP49-204ENST00000423567 MSLNLQ96KJ4 702 aa11.92□□□□□ -0.5
USP49-204ENST00000423567 KLHL5Q96PQ7 755 aa11.92□□□□□ -0.5
USP49-204ENST00000423567 TSPAN18Q96SJ8 248 aa11.92□□□□□ -0.5
USP49-204ENST00000423567 PAAF1Q9BRP4 392 aa11.92□□□□□ -0.5
USP49-204ENST00000423567 TTPALQ9BTX7 342 aa11.92□□□□□ -0.5
USP49-204ENST00000423567 GPR62Q9BZJ7 368 aa11.92□□□□□ -0.5
USP49-204ENST00000423567 CXCL16Q9H2A7 254 aa11.92□□□□□ -0.5
USP49-204ENST00000423567 TMEM206Q9H813 350 aa11.92□□□□□ -0.5
USP49-204ENST00000423567 CACNG4Q9UBN1 327 aa11.92□□□□□ -0.5
USP49-204ENST00000423567 PRKAG3Q9UGI9 489 aa11.92□□□□□ -0.5
USP49-204ENST00000423567 USP25Q9UHP3 1055 aa11.92□□□□□ -0.5
USP49-204ENST00000423567 NUB1Q9Y5A7 615 aa11.92□□□□□ -0.5
USP49-204ENST00000423567 MYO7AQ13402 2215 aa11.92□□□□□ -0.5
USP49-204ENST00000423567 A0A1B0GVL5 298 aa11.91□□□□□ -0.5
USP49-204ENST00000423567 GOLGA6L4A6NEF3 574 aa11.91□□□□□ -0.5
USP49-204ENST00000423567 TMEM189-UBE2V1I3L0A0 370 aa11.91□□□□□ -0.5
USP49-204ENST00000423567 TNFRSF10AO00220 468 aa11.91□□□□□ -0.5
USP49-204ENST00000423567 PODXLO00592 558 aa11.91□□□□□ -0.5
USP49-204ENST00000423567 EFEMP2O95967 443 aa11.91□□□□□ -0.5
USP49-204ENST00000423567 CNPP09543 421 aaKnown RBP11.91□□□□□ -0.5
USP49-204ENST00000423567 SLFN14P0C7P3 912 aa11.91□□□□□ -0.5
USP49-204ENST00000423567 PFKFB1P16118 471 aa11.91□□□□□ -0.5
USP49-204ENST00000423567 SSTR3P32745 418 aaPredicted RBP11.91□□□□□ -0.5
USP49-204ENST00000423567 AFMP43652 599 aa11.91□□□□□ -0.5
USP49-204ENST00000423567 CLCNKBP51801 687 aa11.91□□□□□ -0.5
USP49-204ENST00000423567 RBM10P98175 930 aaKnown RBP11.91□□□□□ -0.5
USP49-204ENST00000423567 KCNC3Q14003 757 aa11.91□□□□□ -0.5
USP49-204ENST00000423567 SMAD2Q15796 467 aaKnown RBP11.91□□□□□ -0.5
USP49-204ENST00000423567 UPP1Q16831 310 aa11.91□□□□□ -0.5
USP49-204ENST00000423567 SLC10A6Q3KNW5 377 aa11.91□□□□□ -0.5
USP49-204ENST00000423567 KIAA0319Q5VV43 1072 aa11.91□□□□□ -0.5
USP49-204ENST00000423567 CES5AQ6NT32 575 aa11.91□□□□□ -0.5
USP49-204ENST00000423567 CNNM4Q6P4Q7 775 aa11.91□□□□□ -0.5
USP49-204ENST00000423567 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.91□□□□□ -0.5
USP49-204ENST00000423567 TAS1R1Q7RTX1 841 aa11.91□□□□□ -0.5
USP49-204ENST00000423567 CEP57Q86XR8 500 aa11.91□□□□□ -0.5
USP49-204ENST00000423567 SMRP1Q8NCR6 262 aa11.91□□□□□ -0.5
USP49-204ENST00000423567 CCDC34Q96HJ3 373 aa11.91□□□□□ -0.5
USP49-204ENST00000423567 POP1Q99575 1024 aaKnown RBP11.91□□□□□ -0.5
USP49-204ENST00000423567 C7orf25Q9BPX7 421 aa11.91□□□□□ -0.5
USP49-204ENST00000423567 HAPLN2Q9GZV7 340 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms