RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 ABCF3Q9NUQ8 709 aa16.87■□□□□ 0.29
CDH1-202ENST00000422392 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.87■□□□□ 0.29
CDH1-202ENST00000422392 SAMD15Q9P1V8 674 aa16.87■□□□□ 0.29
CDH1-202ENST00000422392 TBK1Q9UHD2 729 aa16.87■□□□□ 0.29
CDH1-202ENST00000422392 TPX2Q9ULW0 747 aaKnown RBP16.87■□□□□ 0.29
CDH1-202ENST00000422392 ASAP2O43150 1006 aa16.86■□□□□ 0.29
CDH1-202ENST00000422392 GH1P01241 217 aa16.86■□□□□ 0.29
CDH1-202ENST00000422392 ASNSP08243 561 aa16.86■□□□□ 0.29
CDH1-202ENST00000422392 IVDP26440 423 aa16.86■□□□□ 0.29
CDH1-202ENST00000422392 WNT7BP56706 349 aa16.86■□□□□ 0.29
CDH1-202ENST00000422392 NIPA1Q7RTP0 329 aa16.86■□□□□ 0.29
CDH1-202ENST00000422392 PASD1Q8IV76 773 aa16.86■□□□□ 0.29
CDH1-202ENST00000422392 CCDC50Q8IVM0 306 aa16.86■□□□□ 0.29
CDH1-202ENST00000422392 ZNF516Q92618 1163 aa16.86■□□□□ 0.29
CDH1-202ENST00000422392 KIFAP3Q92845 792 aa16.86■□□□□ 0.29
CDH1-202ENST00000422392 SGSM3Q96HU1 749 aa16.86■□□□□ 0.29
CDH1-202ENST00000422392 WNK4Q96J92 1243 aa16.86■□□□□ 0.29
CDH1-202ENST00000422392 IWS1Q96ST2 819 aa16.86■□□□□ 0.29
CDH1-202ENST00000422392 GMLQ99445 158 aa16.86■□□□□ 0.29
CDH1-202ENST00000422392 TMEM109Q9BVC6 243 aa16.86■□□□□ 0.29
CDH1-202ENST00000422392 EXOC7Q9UPT5 735 aa16.86■□□□□ 0.29
CDH1-202ENST00000422392 FER1L6Q2WGJ9 1857 aa16.86■□□□□ 0.29
CDH1-202ENST00000422392 TMEM120BA0PK00 339 aa16.86■□□□□ 0.29
CDH1-202ENST00000422392 UNGP13051 313 aaPredicted RBP16.86■□□□□ 0.29
CDH1-202ENST00000422392 MCF2L2Q86YR7 1114 aa16.86■□□□□ 0.29
CDH1-202ENST00000422392 MCOLN2Q8IZK6 566 aa16.86■□□□□ 0.29
CDH1-202ENST00000422392 GDAP1Q8TB36 358 aa16.86■□□□□ 0.29
CDH1-202ENST00000422392 CEP170P1Q96L14 293 aa16.86■□□□□ 0.29
CDH1-202ENST00000422392 RUNDC3BQ96NL0 473 aa16.86■□□□□ 0.29
CDH1-202ENST00000422392 FGFR1OP2Q9NVK5 253 aa16.86■□□□□ 0.29
CDH1-202ENST00000422392 WDR64B1ANS9 1081 aa16.85■□□□□ 0.29
CDH1-202ENST00000422392 CHUKO15111 745 aa16.85■□□□□ 0.29
CDH1-202ENST00000422392 ZNF862O60290 1169 aa16.85■□□□□ 0.29
CDH1-202ENST00000422392 GJB6O95452 261 aa16.85■□□□□ 0.29
CDH1-202ENST00000422392 XRCC4Q13426 336 aa16.85■□□□□ 0.29
CDH1-202ENST00000422392 HIBCHQ6NVY1 386 aaPredicted RBP16.85■□□□□ 0.29
CDH1-202ENST00000422392 RHBDF2Q6PJF5 856 aa16.85■□□□□ 0.29
CDH1-202ENST00000422392 TAOK1Q7L7X3 1001 aa16.85■□□□□ 0.29
CDH1-202ENST00000422392 CEP57Q86XR8 500 aa16.85■□□□□ 0.29
CDH1-202ENST00000422392 LARGE2Q8N3Y3 721 aa16.85■□□□□ 0.29
CDH1-202ENST00000422392 BICD1Q96G01 975 aa16.85■□□□□ 0.29
CDH1-202ENST00000422392 MFSD14AQ96MC6 490 aa16.85■□□□□ 0.29
CDH1-202ENST00000422392 PDCD2LQ9BRP1 358 aa16.85■□□□□ 0.29
CDH1-202ENST00000422392 KCNK9Q9NPC2 374 aa16.85■□□□□ 0.29
CDH1-202ENST00000422392 TCP11X1B4DZS4 312 aa16.85■□□□□ 0.29
CDH1-202ENST00000422392 SNCBQ16143 134 aa16.85■□□□□ 0.29
CDH1-202ENST00000422392 MFSD5Q6N075 450 aa16.85■□□□□ 0.29
CDH1-202ENST00000422392 VSTM1Q6UX27 236 aa16.85■□□□□ 0.29
CDH1-202ENST00000422392 CYP4X1Q8N118 509 aa16.85■□□□□ 0.29
CDH1-202ENST00000422392 GPATCH11Q8N954 259 aa16.85■□□□□ 0.29
CDH1-202ENST00000422392 SLC38A10Q9HBR0 1119 aa16.85■□□□□ 0.29
CDH1-202ENST00000422392 WHRNQ9P202 907 aa16.85■□□□□ 0.29
CDH1-202ENST00000422392 GABBR1Q9UBS5 961 aa16.85■□□□□ 0.29
CDH1-202ENST00000422392 MYPNQ86TC9 1320 aa16.85■□□□□ 0.29
CDH1-202ENST00000422392 MYH9P35579 1960 aaKnown RBP16.85■□□□□ 0.29
CDH1-202ENST00000422392 HGSO14964 777 aaPredicted RBP16.84■□□□□ 0.29
CDH1-202ENST00000422392 RALAP11233 206 aa16.84■□□□□ 0.29
CDH1-202ENST00000422392 CETPP11597 493 aa16.84■□□□□ 0.29
CDH1-202ENST00000422392 ADCY8P40145 1251 aa16.84■□□□□ 0.29
CDH1-202ENST00000422392 MPP2Q14168 576 aa16.84■□□□□ 0.29
CDH1-202ENST00000422392 E2F5Q15329 346 aa16.84■□□□□ 0.29
CDH1-202ENST00000422392 ARHGEF16Q5VV41 709 aa16.84■□□□□ 0.29
CDH1-202ENST00000422392 TRMT10CQ7L0Y3 403 aaKnown RBP16.84■□□□□ 0.29
CDH1-202ENST00000422392 TRPM8Q7Z2W7 1104 aa16.84■□□□□ 0.29
CDH1-202ENST00000422392 ANKS1BQ7Z6G8 1248 aa16.84■□□□□ 0.29
CDH1-202ENST00000422392 SNF8Q96H20 258 aa16.84■□□□□ 0.29
CDH1-202ENST00000422392 DCLK3Q9C098 648 aa16.84■□□□□ 0.29
CDH1-202ENST00000422392 PXMP2Q9NR77 195 aa16.84■□□□□ 0.29
CDH1-202ENST00000422392 KLHL11Q9NVR0 708 aa16.84■□□□□ 0.29
CDH1-202ENST00000422392 RIPK3Q9Y572 518 aa16.84■□□□□ 0.29
CDH1-202ENST00000422392 ARID2Q68CP9 1835 aa16.84■□□□□ 0.29
CDH1-202ENST00000422392 TBC1D12O60347 775 aa16.84■□□□□ 0.29
CDH1-202ENST00000422392 GHRP10912 638 aa16.84■□□□□ 0.29
CDH1-202ENST00000422392 SNRPFP62306 86 aaKnown RBP16.84■□□□□ 0.29
CDH1-202ENST00000422392 ZKSCAN8Q15776 578 aaPredicted RBP16.84■□□□□ 0.29
CDH1-202ENST00000422392 TAS1R3Q7RTX0 852 aa16.84■□□□□ 0.29
CDH1-202ENST00000422392 GPD1LQ8N335 351 aa16.84■□□□□ 0.29
CDH1-202ENST00000422392 FLAD1Q8NFF5 587 aa16.84■□□□□ 0.29
CDH1-202ENST00000422392 DDX27Q96GQ7 796 aaKnown RBP16.84■□□□□ 0.29
CDH1-202ENST00000422392 FBXL18Q96ME1 805 aa16.84■□□□□ 0.29
CDH1-202ENST00000422392 STMN4Q9H169 189 aaPredicted RBP16.84■□□□□ 0.29
CDH1-202ENST00000422392 AGAP1Q9UPQ3 857 aa16.84■□□□□ 0.29
CDH1-202ENST00000422392 THAP12O43422 761 aa16.84■□□□□ 0.29
CDH1-202ENST00000422392 DNAJC8O75937 253 aaPredicted RBP16.84■□□□□ 0.29
CDH1-202ENST00000422392 TAS2R40P59535 323 aa16.84■□□□□ 0.29
CDH1-202ENST00000422392 C9orf72Q96LT7 481 aa16.84■□□□□ 0.29
CDH1-202ENST00000422392 C11orf70Q9BRQ4 267 aa16.84■□□□□ 0.29
CDH1-202ENST00000422392 PLVAPQ9BX97 442 aa16.84■□□□□ 0.29
CDH1-202ENST00000422392 CCDC134Q9H6E4 229 aa16.84■□□□□ 0.29
CDH1-202ENST00000422392 C1orf112Q9NSG2 853 aa16.84■□□□□ 0.29
CDH1-202ENST00000422392 USTQ9Y2C2 406 aa16.84■□□□□ 0.29
CDH1-202ENST00000422392 PLSCR1O15162 318 aa16.83■□□□□ 0.28
CDH1-202ENST00000422392 TTC4O95801 387 aa16.83■□□□□ 0.28
CDH1-202ENST00000422392 ITIH2P19823 946 aa16.83■□□□□ 0.28
CDH1-202ENST00000422392 RDXP35241 583 aaKnown RBP16.83■□□□□ 0.28
CDH1-202ENST00000422392 SSR1P43307 286 aaKnown RBP16.83■□□□□ 0.28
CDH1-202ENST00000422392 ACOT2P49753 483 aa16.83■□□□□ 0.28
CDH1-202ENST00000422392 JAK3P52333 1124 aa16.83■□□□□ 0.28
CDH1-202ENST00000422392 ITIH4Q14624 930 aa16.83■□□□□ 0.28
CDH1-202ENST00000422392 NUGGCQ68CJ6 796 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms