RNA–Protein interactions for RNA: ENST00000421689.6

CAST-208, Transcript of calpastatin, humanhuman

TSL 5

Gene CAST, Length 913 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-208ENST00000421689 PDE11AQ9HCR9 933 aa12.79□□□□□ -0.36
CAST-208ENST00000421689 SLC38A7Q9NVC3 462 aa12.79□□□□□ -0.36
CAST-208ENST00000421689 TBC1D13Q9NVG8 400 aa12.79□□□□□ -0.36
CAST-208ENST00000421689 ARMCX3Q9UH62 379 aaPredicted RBP12.79□□□□□ -0.36
CAST-208ENST00000421689 C2CD2Q9Y426 696 aa12.79□□□□□ -0.36
CAST-208ENST00000421689 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.79□□□□□ -0.36
CAST-208ENST00000421689 COL4A6Q14031 1691 aa12.78□□□□□ -0.36
CAST-208ENST00000421689 A0A1W2PPC1 479 aa12.78□□□□□ -0.36
CAST-208ENST00000421689 XPOTO43592 962 aaKnown RBP12.78□□□□□ -0.36
CAST-208ENST00000421689 TNNI1P19237 187 aa12.78□□□□□ -0.36
CAST-208ENST00000421689 VAMP7P51809 220 aa12.78□□□□□ -0.36
CAST-208ENST00000421689 MARSP56192 900 aaKnown RBP12.78□□□□□ -0.36
CAST-208ENST00000421689 RNASELQ05823 741 aaKnown RBP12.78□□□□□ -0.36
CAST-208ENST00000421689 SPAG1Q07617 926 aa12.78□□□□□ -0.36
CAST-208ENST00000421689 BFSP1Q12934 665 aa12.78□□□□□ -0.36
CAST-208ENST00000421689 TMEM132DQ14C87 1099 aa12.78□□□□□ -0.36
CAST-208ENST00000421689 NCAPHQ15003 741 aa12.78□□□□□ -0.36
CAST-208ENST00000421689 IQCB1Q15051 598 aa12.78□□□□□ -0.36
CAST-208ENST00000421689 ZBTB6Q15916 424 aa12.78□□□□□ -0.36
CAST-208ENST00000421689 GLRA4Q5JXX5 417 aa12.78□□□□□ -0.36
CAST-208ENST00000421689 PRPF38BQ5VTL8 546 aaKnown RBP12.78□□□□□ -0.36
CAST-208ENST00000421689 JADE1Q6IE81 842 aa12.78□□□□□ -0.36
CAST-208ENST00000421689 CREBRFQ8IUR6 639 aa12.78□□□□□ -0.36
CAST-208ENST00000421689 WDR49Q8IV35 697 aa12.78□□□□□ -0.36
CAST-208ENST00000421689 DHX40Q8IX18 779 aaKnown RBP12.78□□□□□ -0.36
CAST-208ENST00000421689 FAM200AQ8TCP9 573 aa12.78□□□□□ -0.36
CAST-208ENST00000421689 CACTINQ8WUQ7 758 aaKnown RBP12.78□□□□□ -0.36
CAST-208ENST00000421689 KIF12Q96FN5 646 aa12.78□□□□□ -0.36
CAST-208ENST00000421689 PPP1R10Q96QC0 940 aaKnown RBP12.78□□□□□ -0.36
CAST-208ENST00000421689 CGRRF1Q99675 332 aa12.78□□□□□ -0.36
CAST-208ENST00000421689 CBX8Q9HC52 389 aa12.78□□□□□ -0.36
CAST-208ENST00000421689 SAMSN1Q9NSI8 373 aaKnown RBP12.78□□□□□ -0.36
CAST-208ENST00000421689 FANCLQ9NW38 375 aa12.78□□□□□ -0.36
CAST-208ENST00000421689 MAGEC2Q9UBF1 373 aaPredicted RBP12.78□□□□□ -0.36
CAST-208ENST00000421689 UBQLN1Q9UMX0 589 aaKnown RBP12.78□□□□□ -0.36
CAST-208ENST00000421689 PCDHA11Q9Y5I1 949 aa12.78□□□□□ -0.36
CAST-208ENST00000421689 CEP290O15078 2479 aa12.78□□□□□ -0.36
CAST-208ENST00000421689 NFICP08651 508 aa12.77□□□□□ -0.37
CAST-208ENST00000421689 DLATP10515 647 aaKnown RBP12.77□□□□□ -0.37
CAST-208ENST00000421689 CYP3A5P20815 502 aa12.77□□□□□ -0.37
CAST-208ENST00000421689 RABGGTBP53611 331 aa12.77□□□□□ -0.37
CAST-208ENST00000421689 AP3M2P53677 418 aa12.77□□□□□ -0.37
CAST-208ENST00000421689 WNT7BP56706 349 aa12.77□□□□□ -0.37
CAST-208ENST00000421689 CLDN10P78369 228 aa12.77□□□□□ -0.37
CAST-208ENST00000421689 DUOXA2Q1HG44 320 aa12.77□□□□□ -0.37
CAST-208ENST00000421689 IRF2BP1Q8IU81 584 aa12.77□□□□□ -0.37
CAST-208ENST00000421689 EFCAB13Q8IY85 973 aa12.77□□□□□ -0.37
CAST-208ENST00000421689 FIBCD1Q8N539 461 aa12.77□□□□□ -0.37
CAST-208ENST00000421689 BEST2Q8NFU1 509 aa12.77□□□□□ -0.37
CAST-208ENST00000421689 PLEKHO2Q8TD55 490 aa12.77□□□□□ -0.37
CAST-208ENST00000421689 SP7Q8TDD2 431 aaPredicted RBP12.77□□□□□ -0.37
CAST-208ENST00000421689 ANKRD36BP1Q96IX9 119 aa12.77□□□□□ -0.37
CAST-208ENST00000421689 CNOT6LQ96LI5 555 aaKnown RBP12.77□□□□□ -0.37
CAST-208ENST00000421689 POP1Q99575 1024 aaKnown RBP12.77□□□□□ -0.37
CAST-208ENST00000421689 INTS13Q9NVM9 706 aa12.77□□□□□ -0.37
CAST-208ENST00000421689 PLAGL2Q9UPG8 496 aa12.77□□□□□ -0.37
CAST-208ENST00000421689 LRRIQ3A6PVS8 624 aaPredicted RBP12.76□□□□□ -0.37
CAST-208ENST00000421689 GRXCR1A8MXD5 290 aa12.76□□□□□ -0.37
CAST-208ENST00000421689 KCNJ18B7U540 433 aa12.76□□□□□ -0.37
CAST-208ENST00000421689 STX10O60499 249 aa12.76□□□□□ -0.37
CAST-208ENST00000421689 DDHD2O94830 711 aa12.76□□□□□ -0.37
CAST-208ENST00000421689 TNNC2P02585 160 aa12.76□□□□□ -0.37
CAST-208ENST00000421689 TMEM191BP0C7N4 346 aa12.76□□□□□ -0.37
CAST-208ENST00000421689 CDK11BP21127 795 aaKnown RBP12.76□□□□□ -0.37
CAST-208ENST00000421689 EEF1GP26641 437 aaKnown RBP12.76□□□□□ -0.37
CAST-208ENST00000421689 MTIF2P46199 727 aaKnown RBP12.76□□□□□ -0.37
CAST-208ENST00000421689 TPM4P67936 248 aa12.76□□□□□ -0.37
CAST-208ENST00000421689 DLG4P78352 724 aa12.76□□□□□ -0.37
CAST-208ENST00000421689 TFAMQ00059 246 aaKnown RBP12.76□□□□□ -0.37
CAST-208ENST00000421689 DSC1Q08554 894 aa12.76□□□□□ -0.37
CAST-208ENST00000421689 TUSC3Q13454 348 aa12.76□□□□□ -0.37
CAST-208ENST00000421689 KCNJ12Q14500 433 aa12.76□□□□□ -0.37
CAST-208ENST00000421689 NAB2Q15742 525 aa12.76□□□□□ -0.37
CAST-208ENST00000421689 RAB30Q15771 203 aa12.76□□□□□ -0.37
CAST-208ENST00000421689 HSP90AA4PQ58FG1 418 aa12.76□□□□□ -0.37
CAST-208ENST00000421689 TCP11X2Q5H9J9 407 aa12.76□□□□□ -0.37
CAST-208ENST00000421689 CDKAL1Q5VV42 579 aa12.76□□□□□ -0.37
CAST-208ENST00000421689 TCERG1LQ5VWI1 586 aa12.76□□□□□ -0.37
CAST-208ENST00000421689 FAM109BQ6ICB4 259 aaPredicted RBP12.76□□□□□ -0.37
CAST-208ENST00000421689 ZNF280BQ86YH2 543 aa12.76□□□□□ -0.37
CAST-208ENST00000421689 TRIM59Q8IWR1 403 aa12.76□□□□□ -0.37
CAST-208ENST00000421689 C18orf25Q96B23 403 aaPredicted RBP12.76□□□□□ -0.37
CAST-208ENST00000421689 UROC1Q96N76 676 aa12.76□□□□□ -0.37
CAST-208ENST00000421689 TMEM175Q9BSA9 504 aa12.76□□□□□ -0.37
CAST-208ENST00000421689 NRDE2Q9H7Z3 1164 aa12.76□□□□□ -0.37
CAST-208ENST00000421689 DPP3Q9NY33 737 aa12.76□□□□□ -0.37
CAST-208ENST00000421689 CARNS1A5YM72 827 aa12.75□□□□□ -0.37
CAST-208ENST00000421689 GOLGA6L19H0YKK7 550 aa12.75□□□□□ -0.37
CAST-208ENST00000421689 ALDH2P05091 517 aa12.75□□□□□ -0.37
CAST-208ENST00000421689 TRIM49P0CI25 452 aa12.75□□□□□ -0.37
CAST-208ENST00000421689 TRIM49CP0CI26 452 aa12.75□□□□□ -0.37
CAST-208ENST00000421689 GTF2H1P32780 548 aa12.75□□□□□ -0.37
CAST-208ENST00000421689 RPL9P32969 192 aaKnown RBP12.75□□□□□ -0.37
CAST-208ENST00000421689 SOX4Q06945 474 aaPredicted RBP12.75□□□□□ -0.37
CAST-208ENST00000421689 DCAF17Q5H9S7 520 aaPredicted RBP12.75□□□□□ -0.37
CAST-208ENST00000421689 C1orf220Q5T0J3 134 aa12.75□□□□□ -0.37
CAST-208ENST00000421689 SPOUT1Q5T280 376 aaKnown RBP12.75□□□□□ -0.37
CAST-208ENST00000421689 LMBRD2Q68DH5 695 aaPredicted RBP12.75□□□□□ -0.37
CAST-208ENST00000421689 LUZP1Q86V48 1076 aa12.75□□□□□ -0.37
CAST-208ENST00000421689 COLGALT2Q8IYK4 626 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms