RNA–Protein interactions for RNA: ENST00000421378.2

LINC00271-201, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best) BASIC

Gene LINC00271, Length 1,580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-201ENST00000421378 TMEM132DQ14C87 1099 aa19.02■□□□□ 0.63
LINC00271-201ENST00000421378 CCDC40Q4G0X9 1142 aa19.02■□□□□ 0.63
LINC00271-201ENST00000421378 AOPEPQ8N6M6 819 aa19.02■□□□□ 0.63
LINC00271-201ENST00000421378 TSPY26PQ9H489 355 aa19.02■□□□□ 0.63
LINC00271-201ENST00000421378 THAP9Q9H5L6 903 aa19.02■□□□□ 0.63
LINC00271-201ENST00000421378 SLC38A7Q9NVC3 462 aa19.02■□□□□ 0.63
LINC00271-201ENST00000421378 ARMCX3Q9UH62 379 aaPredicted RBP19.02■□□□□ 0.63
LINC00271-201ENST00000421378 DERAQ9Y315 318 aa19.02■□□□□ 0.63
LINC00271-201ENST00000421378 GBF1Q92538 1859 aa19.01■□□□□ 0.63
LINC00271-201ENST00000421378 NT5DC4Q86YG4 428 aa19.01■□□□□ 0.63
LINC00271-201ENST00000421378 EFCAB13Q8IY85 973 aa19.01■□□□□ 0.63
LINC00271-201ENST00000421378 SP7Q8TDD2 431 aaPredicted RBP19.01■□□□□ 0.63
LINC00271-201ENST00000421378 PARD3BQ8TEW8 1205 aa19.01■□□□□ 0.63
LINC00271-201ENST00000421378 BORCS6Q96GS4 357 aa19.01■□□□□ 0.63
LINC00271-201ENST00000421378 FAM193BQ96PV7 902 aaPredicted RBP19.01■□□□□ 0.63
LINC00271-201ENST00000421378 ANP32EQ9BTT0 268 aa19.01■□□□□ 0.63
LINC00271-201ENST00000421378 METTL14Q9HCE5 456 aaKnown RBP19.01■□□□□ 0.63
LINC00271-201ENST00000421378 PCDHA11Q9Y5I1 949 aa19.01■□□□□ 0.63
LINC00271-201ENST00000421378 LCHNA4D1U4 455 aa19■□□□□ 0.63
LINC00271-201ENST00000421378 IKBKBO14920 756 aa19■□□□□ 0.63
LINC00271-201ENST00000421378 XPOTO43592 962 aaKnown RBP19■□□□□ 0.63
LINC00271-201ENST00000421378 TNNI1P19237 187 aa19■□□□□ 0.63
LINC00271-201ENST00000421378 VAMP7P51809 220 aa19■□□□□ 0.63
LINC00271-201ENST00000421378 TFAMQ00059 246 aaKnown RBP19■□□□□ 0.63
LINC00271-201ENST00000421378 FRMD5Q7Z6J6 570 aa19■□□□□ 0.63
LINC00271-201ENST00000421378 WDR49Q8IV35 697 aa19■□□□□ 0.63
LINC00271-201ENST00000421378 FAM114A1Q8IWE2 563 aa19■□□□□ 0.63
LINC00271-201ENST00000421378 DHX40Q8IX18 779 aaKnown RBP19■□□□□ 0.63
LINC00271-201ENST00000421378 FIBCD1Q8N539 461 aa19■□□□□ 0.63
LINC00271-201ENST00000421378 PLEKHO2Q8TD55 490 aa19■□□□□ 0.63
LINC00271-201ENST00000421378 TMC2Q8TDI7 906 aa19■□□□□ 0.63
LINC00271-201ENST00000421378 CNOT6LQ96LI5 555 aaKnown RBP19■□□□□ 0.63
LINC00271-201ENST00000421378 PBX4Q9BYU1 374 aa19■□□□□ 0.63
LINC00271-201ENST00000421378 HCSTQ9UBK5 93 aa19■□□□□ 0.63
LINC00271-201ENST00000421378 UBQLN1Q9UMX0 589 aaKnown RBP19■□□□□ 0.63
LINC00271-201ENST00000421378 LRRIQ3A6PVS8 624 aaPredicted RBP18.99■□□□□ 0.63
LINC00271-201ENST00000421378 BECN2A8MW95 431 aa18.99■□□□□ 0.63
LINC00271-201ENST00000421378 ZC3H11AO75152 810 aaKnown RBP eCLIP18.99■□□□□ 0.63
LINC00271-201ENST00000421378 MYOGP15173 224 aa18.99■□□□□ 0.63
LINC00271-201ENST00000421378 MARSP56192 900 aaKnown RBP18.99■□□□□ 0.63
LINC00271-201ENST00000421378 ENPEPQ07075 957 aa18.99■□□□□ 0.63
LINC00271-201ENST00000421378 DSC1Q08554 894 aa18.99■□□□□ 0.63
LINC00271-201ENST00000421378 PTPRJQ12913 1337 aa18.99■□□□□ 0.63
LINC00271-201ENST00000421378 TUSC3Q13454 348 aa18.99■□□□□ 0.63
LINC00271-201ENST00000421378 NCAPHQ15003 741 aa18.99■□□□□ 0.63
LINC00271-201ENST00000421378 NAB2Q15742 525 aa18.99■□□□□ 0.63
LINC00271-201ENST00000421378 RAB30Q15771 203 aa18.99■□□□□ 0.63
LINC00271-201ENST00000421378 ZBTB6Q15916 424 aa18.99■□□□□ 0.63
LINC00271-201ENST00000421378 HSP90AA4PQ58FG1 418 aa18.99■□□□□ 0.63
LINC00271-201ENST00000421378 DCAF17Q5H9S7 520 aaPredicted RBP18.99■□□□□ 0.63
LINC00271-201ENST00000421378 LMBRD2Q68DH5 695 aaPredicted RBP18.99■□□□□ 0.63
LINC00271-201ENST00000421378 ZNF280BQ86YH2 543 aa18.99■□□□□ 0.63
LINC00271-201ENST00000421378 CREBRFQ8IUR6 639 aa18.99■□□□□ 0.63
LINC00271-201ENST00000421378 FAM200AQ8TCP9 573 aa18.99■□□□□ 0.63
LINC00271-201ENST00000421378 C18orf25Q96B23 403 aaPredicted RBP18.99■□□□□ 0.63
LINC00271-201ENST00000421378 POP1Q99575 1024 aaKnown RBP18.99■□□□□ 0.63
LINC00271-201ENST00000421378 CGRRF1Q99675 332 aa18.99■□□□□ 0.63
LINC00271-201ENST00000421378 SAMSN1Q9NSI8 373 aaKnown RBP18.99■□□□□ 0.63
LINC00271-201ENST00000421378 TUBGCP4Q9UGJ1 667 aa18.99■□□□□ 0.63
LINC00271-201ENST00000421378 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.99■□□□□ 0.63
LINC00271-201ENST00000421378 MRPL42Q9Y6G3 142 aaKnown RBP18.99■□□□□ 0.63
LINC00271-201ENST00000421378 SMTNL1A8MU46 457 aa18.98■□□□□ 0.63
LINC00271-201ENST00000421378 DDHD2O94830 711 aa18.98■□□□□ 0.63
LINC00271-201ENST00000421378 CA3P07451 260 aa18.98■□□□□ 0.63
LINC00271-201ENST00000421378 TMEM191BP0C7N4 346 aa18.98■□□□□ 0.63
LINC00271-201ENST00000421378 PBX2P40425 430 aa18.98■□□□□ 0.63
LINC00271-201ENST00000421378 DLG4P78352 724 aa18.98■□□□□ 0.63
LINC00271-201ENST00000421378 CLDN10P78369 228 aa18.98■□□□□ 0.63
LINC00271-201ENST00000421378 SPOUT1Q5T280 376 aaKnown RBP18.98■□□□□ 0.63
LINC00271-201ENST00000421378 TCERG1LQ5VWI1 586 aa18.98■□□□□ 0.63
LINC00271-201ENST00000421378 IRF2BP1Q8IU81 584 aa18.98■□□□□ 0.63
LINC00271-201ENST00000421378 BEST2Q8NFU1 509 aa18.98■□□□□ 0.63
LINC00271-201ENST00000421378 CACTINQ8WUQ7 758 aaKnown RBP18.98■□□□□ 0.63
LINC00271-201ENST00000421378 ANKRD36BP1Q96IX9 119 aa18.98■□□□□ 0.63
LINC00271-201ENST00000421378 MTMR12Q9C0I1 747 aa18.98■□□□□ 0.63
LINC00271-201ENST00000421378 NRDE2Q9H7Z3 1164 aa18.98■□□□□ 0.63
LINC00271-201ENST00000421378 CBX8Q9HC52 389 aa18.98■□□□□ 0.63
LINC00271-201ENST00000421378 INTS13Q9NVM9 706 aa18.98■□□□□ 0.63
LINC00271-201ENST00000421378 FANCLQ9NW38 375 aa18.98■□□□□ 0.63
LINC00271-201ENST00000421378 MAGEC2Q9UBF1 373 aaPredicted RBP18.98■□□□□ 0.63
LINC00271-201ENST00000421378 MSRAQ9UJ68 235 aa18.98■□□□□ 0.63
LINC00271-201ENST00000421378 CASTOR2A6NHX0 329 aa18.98■□□□□ 0.63
LINC00271-201ENST00000421378 B4GALT3O60512 393 aa18.98■□□□□ 0.63
LINC00271-201ENST00000421378 TRIM49P0CI25 452 aa18.98■□□□□ 0.63
LINC00271-201ENST00000421378 TRIM49CP0CI26 452 aa18.98■□□□□ 0.63
LINC00271-201ENST00000421378 CYP3A5P20815 502 aa18.98■□□□□ 0.63
LINC00271-201ENST00000421378 SMAD3P84022 425 aaKnown RBP18.98■□□□□ 0.63
LINC00271-201ENST00000421378 SOX4Q06945 474 aaPredicted RBP18.98■□□□□ 0.63
LINC00271-201ENST00000421378 IQCB1Q15051 598 aa18.98■□□□□ 0.63
LINC00271-201ENST00000421378 DUOXA2Q1HG44 320 aa18.98■□□□□ 0.63
LINC00271-201ENST00000421378 LRIT3Q3SXY7 679 aa18.98■□□□□ 0.63
LINC00271-201ENST00000421378 COLGALT2Q8IYK4 626 aa18.98■□□□□ 0.63
LINC00271-201ENST00000421378 CWH43Q9H720 699 aa18.98■□□□□ 0.63
LINC00271-201ENST00000421378 GOLGA2P5Q9HBQ8 144 aa18.98■□□□□ 0.63
LINC00271-201ENST00000421378 DNAJB4Q9UDY4 337 aa18.98■□□□□ 0.63
LINC00271-201ENST00000421378 YBX2Q9Y2T7 364 aaKnown RBP18.98■□□□□ 0.63
LINC00271-201ENST00000421378 LINC01553A4QN01 128 aa18.97■□□□□ 0.63
LINC00271-201ENST00000421378 TNNC2P02585 160 aa18.97■□□□□ 0.63
LINC00271-201ENST00000421378 CDKAL1Q5VV42 579 aa18.97■□□□□ 0.63
LINC00271-201ENST00000421378 LUZP1Q86V48 1076 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms