RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 HSD17B3P37058 310 aa11.72□□□□□ -0.53
DDX56-203ENST00000421223 NSFP46459 744 aaKnown RBP11.72□□□□□ -0.53
DDX56-203ENST00000421223 IFFO1Q0D2I5 559 aa11.72□□□□□ -0.53
DDX56-203ENST00000421223 TRIP13Q15645 432 aaPredicted RBP11.72□□□□□ -0.53
DDX56-203ENST00000421223 TMEM130Q8N3G9 435 aa11.72□□□□□ -0.53
DDX56-203ENST00000421223 DNERQ8NFT8 737 aa11.72□□□□□ -0.53
DDX56-203ENST00000421223 WHAMMQ8TF30 809 aa11.72□□□□□ -0.53
DDX56-203ENST00000421223 PSPC1Q8WXF1 523 aaKnown RBP11.72□□□□□ -0.53
DDX56-203ENST00000421223 CALR3Q96L12 384 aaKnown RBP11.72□□□□□ -0.53
DDX56-203ENST00000421223 SPATA33Q96N06 139 aa11.72□□□□□ -0.53
DDX56-203ENST00000421223 SGIP1Q9BQI5 828 aa11.72□□□□□ -0.53
DDX56-203ENST00000421223 ZSWIM1Q9BR11 485 aa11.72□□□□□ -0.53
DDX56-203ENST00000421223 CARD9Q9H257 536 aa11.72□□□□□ -0.53
DDX56-203ENST00000421223 PDGFCQ9NRA1 345 aa11.72□□□□□ -0.53
DDX56-203ENST00000421223 GOLGA8KD6RF30 607 aa11.72□□□□□ -0.53
DDX56-203ENST00000421223 KRT19P08727 400 aa11.72□□□□□ -0.53
DDX56-203ENST00000421223 CYP2C8P10632 490 aa11.72□□□□□ -0.53
DDX56-203ENST00000421223 NEDD9Q14511 834 aa11.72□□□□□ -0.53
DDX56-203ENST00000421223 FAM160B1Q5W0V3 765 aa11.72□□□□□ -0.53
DDX56-203ENST00000421223 DPH6Q7L8W6 267 aa11.72□□□□□ -0.53
DDX56-203ENST00000421223 RASGEF1CQ8N431 466 aa11.72□□□□□ -0.53
DDX56-203ENST00000421223 PPP1R13LQ8WUF5 828 aa11.72□□□□□ -0.53
DDX56-203ENST00000421223 FBXL18Q96ME1 805 aa11.72□□□□□ -0.53
DDX56-203ENST00000421223 NAP1L3Q99457 506 aaPredicted RBP11.72□□□□□ -0.53
DDX56-203ENST00000421223 CAPS2Q9BXY5 557 aa11.72□□□□□ -0.53
DDX56-203ENST00000421223 DHX33Q9H6R0 707 aaKnown RBP11.72□□□□□ -0.53
DDX56-203ENST00000421223 PRDM16Q9HAZ2 1276 aa11.72□□□□□ -0.53
DDX56-203ENST00000421223 ADARB2Q9NS39 739 aaKnown RBP11.72□□□□□ -0.53
DDX56-203ENST00000421223 GINS2Q9Y248 185 aa11.72□□□□□ -0.53
DDX56-203ENST00000421223 COL11A1P12107 1806 aaPredicted RBP11.71□□□□□ -0.53
DDX56-203ENST00000421223 RBBP6Q7Z6E9 1792 aaKnown RBP11.71□□□□□ -0.53
DDX56-203ENST00000421223 SSC5DA1L4H1 1573 aa11.71□□□□□ -0.53
DDX56-203ENST00000421223 H0YCG3 227 aa11.71□□□□□ -0.53
DDX56-203ENST00000421223 MAPK13O15264 365 aa11.71□□□□□ -0.53
DDX56-203ENST00000421223 STAM2O75886 525 aa11.71□□□□□ -0.53
DDX56-203ENST00000421223 NAMPTP43490 491 aa11.71□□□□□ -0.53
DDX56-203ENST00000421223 ACAD10Q6JQN1 1059 aa11.71□□□□□ -0.53
DDX56-203ENST00000421223 LRRC31Q6UY01 552 aa11.71□□□□□ -0.53
DDX56-203ENST00000421223 RIOX2Q8IUF8 465 aa11.71□□□□□ -0.53
DDX56-203ENST00000421223 IQCKQ8N0W5 287 aa11.71□□□□□ -0.53
DDX56-203ENST00000421223 DNAJC17Q9NVM6 304 aaKnown RBP11.71□□□□□ -0.53
DDX56-203ENST00000421223 KLHL11Q9NVR0 708 aa11.71□□□□□ -0.53
DDX56-203ENST00000421223 NXF1Q9UBU9 619 aaKnown RBP11.71□□□□□ -0.53
DDX56-203ENST00000421223 CLEC11AQ9Y240 323 aa11.71□□□□□ -0.53
DDX56-203ENST00000421223 COQ4Q9Y3A0 265 aa11.71□□□□□ -0.53
DDX56-203ENST00000421223 MYO1FO00160 1098 aa11.71□□□□□ -0.54
DDX56-203ENST00000421223 CES2O00748 559 aa11.71□□□□□ -0.54
DDX56-203ENST00000421223 RPS6KA5O75582 802 aa11.71□□□□□ -0.54
DDX56-203ENST00000421223 CST3P01034 146 aaPredicted RBP11.71□□□□□ -0.54
DDX56-203ENST00000421223 WEE2P0C1S8 567 aa11.71□□□□□ -0.54
DDX56-203ENST00000421223 ZBTB48P10074 688 aaPredicted RBP11.71□□□□□ -0.54
DDX56-203ENST00000421223 GZMAP12544 262 aa11.71□□□□□ -0.54
DDX56-203ENST00000421223 CLCN3P51790 818 aa11.71□□□□□ -0.54
DDX56-203ENST00000421223 CUL1Q13616 776 aa11.71□□□□□ -0.54
DDX56-203ENST00000421223 NCOA4Q13772 614 aa11.71□□□□□ -0.54
DDX56-203ENST00000421223 CRELD2Q6UXH1 353 aaPredicted RBP11.71□□□□□ -0.54
DDX56-203ENST00000421223 VTI1AQ96AJ9 217 aa11.71□□□□□ -0.54
DDX56-203ENST00000421223 IMPG2Q9BZV3 1241 aa11.71□□□□□ -0.54
DDX56-203ENST00000421223 MTMR12Q9C0I1 747 aa11.71□□□□□ -0.54
DDX56-203ENST00000421223 APOBEC3GQ9HC16 384 aaKnown RBP11.71□□□□□ -0.54
DDX56-203ENST00000421223 NUB1Q9Y5A7 615 aa11.71□□□□□ -0.54
DDX56-203ENST00000421223 VNN1O95497 513 aa11.7□□□□□ -0.54
DDX56-203ENST00000421223 TXNP10599 105 aaKnown RBP11.7□□□□□ -0.54
DDX56-203ENST00000421223 GNA15P30679 374 aa11.7□□□□□ -0.54
DDX56-203ENST00000421223 NOP14P78316 857 aaKnown RBP11.7□□□□□ -0.54
DDX56-203ENST00000421223 GUCY1A3Q02108 690 aa11.7□□□□□ -0.54
DDX56-203ENST00000421223 SF3A3Q12874 501 aaKnown RBP eCLIP11.7□□□□□ -0.541e-6■■■□□ 19.1
DDX56-203ENST00000421223 PPP1R7Q15435 360 aa11.7□□□□□ -0.54
DDX56-203ENST00000421223 ZACNQ401N2 412 aa11.7□□□□□ -0.54
DDX56-203ENST00000421223 CCDC137Q6PK04 289 aaKnown RBP11.7□□□□□ -0.54
DDX56-203ENST00000421223 CEP120Q8N960 986 aa11.7□□□□□ -0.54
DDX56-203ENST00000421223 ATG4AQ8WYN0 398 aa11.7□□□□□ -0.54
DDX56-203ENST00000421223 SLITRK6Q9H5Y7 841 aa11.7□□□□□ -0.54
DDX56-203ENST00000421223 EFCC1Q9HA90 598 aa11.7□□□□□ -0.54
DDX56-203ENST00000421223 RGPD3A6NKT7 1758 aaPredicted RBP11.7□□□□□ -0.54
DDX56-203ENST00000421223 RGPD4Q7Z3J3 1758 aa11.7□□□□□ -0.54
DDX56-203ENST00000421223 MYH9P35579 1960 aaKnown RBP11.7□□□□□ -0.54
DDX56-203ENST00000421223 TMOD1P28289 359 aa11.7□□□□□ -0.54
DDX56-203ENST00000421223 ORC1Q13415 861 aa11.7□□□□□ -0.54
DDX56-203ENST00000421223 PSMD6Q15008 389 aa11.7□□□□□ -0.54
DDX56-203ENST00000421223 CLEC16AQ2KHT3 1053 aa11.7□□□□□ -0.54
DDX56-203ENST00000421223 NOL9Q5SY16 702 aaKnown RBP11.7□□□□□ -0.54
DDX56-203ENST00000421223 C9orf131Q5VYM1 1079 aa11.7□□□□□ -0.54
DDX56-203ENST00000421223 SLFN12LQ6IEE8 588 aa11.7□□□□□ -0.54
DDX56-203ENST00000421223 MMS22LQ6ZRQ5 1243 aa11.7□□□□□ -0.54
DDX56-203ENST00000421223 JAMLQ86YT9 394 aa11.7□□□□□ -0.54
DDX56-203ENST00000421223 ZDHHC14Q8IZN3 488 aa11.7□□□□□ -0.54
DDX56-203ENST00000421223 PIK3R5Q8WYR1 880 aa11.7□□□□□ -0.54
DDX56-203ENST00000421223 RUBCNQ92622 972 aa11.7□□□□□ -0.54
DDX56-203ENST00000421223 LRRC45Q96CN5 670 aa11.7□□□□□ -0.54
DDX56-203ENST00000421223 OPTNQ96CV9 577 aa11.7□□□□□ -0.54
DDX56-203ENST00000421223 FMO2Q99518 471 aa11.7□□□□□ -0.54
DDX56-203ENST00000421223 MMP19Q99542 508 aa11.7□□□□□ -0.54
DDX56-203ENST00000421223 ADAM22Q9P0K1 906 aa11.7□□□□□ -0.54
DDX56-203ENST00000421223 GTF3C4Q9UKN8 822 aa11.7□□□□□ -0.54
DDX56-203ENST00000421223 PPP2R3BQ9Y5P8 575 aa11.7□□□□□ -0.54
DDX56-203ENST00000421223 CENPFP49454 3210 aa11.7□□□□□ -0.54
DDX56-203ENST00000421223 MIF4GDA9UHW6 222 aaKnown RBP11.7□□□□□ -0.54
DDX56-203ENST00000421223 ERLIN2O94905 339 aa11.7□□□□□ -0.54
DDX56-203ENST00000421223 C4BPAP04003 597 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms