RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 TARS2Q9BW92 718 aaKnown RBP11.38□□□□□ -0.59
PTCH1-206ENST00000421141 TSSK1BQ9BXA7 367 aa11.38□□□□□ -0.59
PTCH1-206ENST00000421141 BCL2L12Q9HB09 334 aa11.38□□□□□ -0.59
PTCH1-206ENST00000421141 CA12O43570 354 aa11.38□□□□□ -0.59
PTCH1-206ENST00000421141 ITGB3P05106 788 aa11.38□□□□□ -0.59
PTCH1-206ENST00000421141 MSH2P43246 934 aa11.38□□□□□ -0.59
PTCH1-206ENST00000421141 MAP2K5Q13163 448 aa11.38□□□□□ -0.59
PTCH1-206ENST00000421141 NIPA1Q7RTP0 329 aa11.38□□□□□ -0.59
PTCH1-206ENST00000421141 MYLK4Q86YV6 388 aaPredicted RBP11.38□□□□□ -0.59
PTCH1-206ENST00000421141 MGARPQ8TDB4 240 aa11.38□□□□□ -0.59
PTCH1-206ENST00000421141 STMN2Q93045 179 aa11.38□□□□□ -0.59
PTCH1-206ENST00000421141 CFAP36Q96G28 342 aa11.38□□□□□ -0.59
PTCH1-206ENST00000421141 CDK5RAP1Q96SZ6 601 aaKnown RBP11.38□□□□□ -0.59
PTCH1-206ENST00000421141 ABHD10Q9NUJ1 306 aa11.38□□□□□ -0.59
PTCH1-206ENST00000421141 FTLP02792 175 aaPredicted RBP11.38□□□□□ -0.59
PTCH1-206ENST00000421141 CPB2Q96IY4 423 aa11.38□□□□□ -0.59
PTCH1-206ENST00000421141 CRYBG1Q9Y4K1 1723 aa11.38□□□□□ -0.59
PTCH1-206ENST00000421141 KDM3BQ7LBC6 1761 aa11.38□□□□□ -0.59
PTCH1-206ENST00000421141 POC1B-GALNT4F8VUJ3 575 aa11.38□□□□□ -0.59
PTCH1-206ENST00000421141 CYP11B2P19099 503 aa11.38□□□□□ -0.59
PTCH1-206ENST00000421141 PAPOLAP51003 745 aaKnown RBP11.38□□□□□ -0.59
PTCH1-206ENST00000421141 GUCY2DQ02846 1103 aa11.38□□□□□ -0.59
PTCH1-206ENST00000421141 LAMTOR4Q0VGL1 99 aa11.38□□□□□ -0.59
PTCH1-206ENST00000421141 BTG3Q14201 252 aaPredicted RBP11.38□□□□□ -0.59
PTCH1-206ENST00000421141 ZNF410Q86VK4 478 aa11.38□□□□□ -0.59
PTCH1-206ENST00000421141 PDIK1LQ8N165 341 aa11.38□□□□□ -0.59
PTCH1-206ENST00000421141 VPS39Q96JC1 886 aa11.38□□□□□ -0.59
PTCH1-206ENST00000421141 STK33Q9BYT3 514 aa11.38□□□□□ -0.59
PTCH1-206ENST00000421141 RANBP17Q9H2T7 1088 aaKnown RBP11.38□□□□□ -0.59
PTCH1-206ENST00000421141 CALCOCO1Q9P1Z2 691 aa11.38□□□□□ -0.59
PTCH1-206ENST00000421141 C4BP0C0L5 1744 aa11.38□□□□□ -0.59
PTCH1-206ENST00000421141 APOL1O14791 398 aa11.38□□□□□ -0.59
PTCH1-206ENST00000421141 CLCN1P35523 988 aa11.38□□□□□ -0.59
PTCH1-206ENST00000421141 ANO4Q32M45 955 aa11.38□□□□□ -0.59
PTCH1-206ENST00000421141 DNAJB3Q8WWF6 145 aa11.38□□□□□ -0.59
PTCH1-206ENST00000421141 CAPNS2Q96L46 248 aa11.38□□□□□ -0.59
PTCH1-206ENST00000421141 IPPQ9Y573 584 aa11.38□□□□□ -0.59
PTCH1-206ENST00000421141 SLC37A4O43826 429 aa11.37□□□□□ -0.59
PTCH1-206ENST00000421141 MPZL3Q6UWV2 235 aa11.37□□□□□ -0.59
PTCH1-206ENST00000421141 CENPUQ71F23 418 aa11.37□□□□□ -0.59
PTCH1-206ENST00000421141 B4GALNT4Q76KP1 1039 aa11.37□□□□□ -0.59
PTCH1-206ENST00000421141 DOLKQ9UPQ8 538 aa11.37□□□□□ -0.59
PTCH1-206ENST00000421141 NRCAMQ92823 1304 aa11.37□□□□□ -0.59
PTCH1-206ENST00000421141 SSTR3P32745 418 aaPredicted RBP11.37□□□□□ -0.59
PTCH1-206ENST00000421141 NOP14P78316 857 aaKnown RBP11.37□□□□□ -0.59
PTCH1-206ENST00000421141 EDRF1Q3B7T1 1238 aa11.37□□□□□ -0.59
PTCH1-206ENST00000421141 PDXDC1Q6P996 788 aa11.37□□□□□ -0.59
PTCH1-206ENST00000421141 TTC23LQ6PF05 361 aa11.37□□□□□ -0.59
PTCH1-206ENST00000421141 MORC4Q8TE76 937 aa11.37□□□□□ -0.59
PTCH1-206ENST00000421141 PPP1R13BQ96KQ4 1090 aa11.37□□□□□ -0.59
PTCH1-206ENST00000421141 PPP1R2P1Q96PQ5 205 aa11.37□□□□□ -0.59
PTCH1-206ENST00000421141 SENP2Q9HC62 589 aa11.37□□□□□ -0.59
PTCH1-206ENST00000421141 MYMKA6NI61 221 aa11.37□□□□□ -0.59
PTCH1-206ENST00000421141 LRRC53A6NM62 1247 aa11.37□□□□□ -0.59
PTCH1-206ENST00000421141 E5RI56 91 aa11.37□□□□□ -0.59
PTCH1-206ENST00000421141 RTN2O75298 545 aa11.37□□□□□ -0.59
PTCH1-206ENST00000421141 HMGCRP04035 888 aa11.37□□□□□ -0.59
PTCH1-206ENST00000421141 TMC7Q7Z402 723 aa11.37□□□□□ -0.59
PTCH1-206ENST00000421141 REPS2Q8NFH8 660 aa11.37□□□□□ -0.59
PTCH1-206ENST00000421141 FAM198AQ9UFP1 575 aa11.37□□□□□ -0.59
PTCH1-206ENST00000421141 SLIT2O94813 1529 aa11.37□□□□□ -0.59
PTCH1-206ENST00000421141 AXLP30530 894 aa11.37□□□□□ -0.59
PTCH1-206ENST00000421141 C10orf120Q5SQS8 335 aa11.37□□□□□ -0.59
PTCH1-206ENST00000421141 SPATA24Q86W54 205 aa11.37□□□□□ -0.59
PTCH1-206ENST00000421141 MRPS31Q92665 395 aaKnown RBP11.37□□□□□ -0.59
PTCH1-206ENST00000421141 OSMRQ99650 979 aa11.37□□□□□ -0.59
PTCH1-206ENST00000421141 RIC1Q4ADV7 1423 aa11.37□□□□□ -0.59
PTCH1-206ENST00000421141 TBKBP1A7MCY6 615 aa11.37□□□□□ -0.59
PTCH1-206ENST00000421141 NPM3O75607 178 aaKnown RBP11.37□□□□□ -0.59
PTCH1-206ENST00000421141 FTCDO95954 541 aa11.37□□□□□ -0.59
PTCH1-206ENST00000421141 CXCR5P32302 372 aa11.37□□□□□ -0.59
PTCH1-206ENST00000421141 ZNF131P52739 623 aa11.37□□□□□ -0.59
PTCH1-206ENST00000421141 ZC2HC1CQ53FD0 456 aaPredicted RBP11.37□□□□□ -0.59
PTCH1-206ENST00000421141 ANKRD20A3Q5VUR7 823 aa11.37□□□□□ -0.59
PTCH1-206ENST00000421141 ARHGAP24Q8N264 748 aa11.37□□□□□ -0.59
PTCH1-206ENST00000421141 WNT8AQ9H1J5 351 aa11.37□□□□□ -0.59
PTCH1-206ENST00000421141 CATSPERBQ9H7T0 1116 aa11.37□□□□□ -0.59
PTCH1-206ENST00000421141 ZNF541Q9H0D2 1346 aa11.37□□□□□ -0.59
PTCH1-206ENST00000421141 RSPH10B2B2RC85 870 aa11.37□□□□□ -0.59
PTCH1-206ENST00000421141 RSPH10BP0C881 870 aa11.37□□□□□ -0.59
PTCH1-206ENST00000421141 ARP10275 920 aa11.37□□□□□ -0.59
PTCH1-206ENST00000421141 INSRRP14616 1297 aa11.37□□□□□ -0.59
PTCH1-206ENST00000421141 KLRC2P26717 231 aa11.37□□□□□ -0.59
PTCH1-206ENST00000421141 RPL10AP62906 217 aaKnown RBP11.37□□□□□ -0.59
PTCH1-206ENST00000421141 LLGL1Q15334 1064 aa11.37□□□□□ -0.59
PTCH1-206ENST00000421141 ANKRD40Q6AI12 368 aa11.37□□□□□ -0.59
PTCH1-206ENST00000421141 CHMP6Q96FZ7 201 aa11.37□□□□□ -0.59
PTCH1-206ENST00000421141 DDX27Q96GQ7 796 aaKnown RBP11.37□□□□□ -0.59
PTCH1-206ENST00000421141 MFAP3LO75121 409 aa11.36□□□□□ -0.59
PTCH1-206ENST00000421141 SLC2A3P11169 496 aa11.36□□□□□ -0.59
PTCH1-206ENST00000421141 LHX1P48742 406 aa11.36□□□□□ -0.59
PTCH1-206ENST00000421141 SRRM1Q8IYB3 904 aaKnown RBP11.36□□□□□ -0.59
PTCH1-206ENST00000421141 HINFPQ9BQA5 517 aa11.36□□□□□ -0.59
PTCH1-206ENST00000421141 PODXLO00592 558 aa11.36□□□□□ -0.59
PTCH1-206ENST00000421141 OGTO15294 1046 aa11.36□□□□□ -0.59
PTCH1-206ENST00000421141 NECAB2Q7Z6G3 386 aa11.36□□□□□ -0.59
PTCH1-206ENST00000421141 SLC35F6Q8N357 371 aa11.36□□□□□ -0.59
PTCH1-206ENST00000421141 UCMAQ8WVF2 138 aa11.36□□□□□ -0.59
PTCH1-206ENST00000421141 WDR18Q9BV38 432 aa11.36□□□□□ -0.59
PTCH1-206ENST00000421141 PCSK1NQ9UHG2 260 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms