RNA–Protein interactions for RNA: ENST00000420567.7

VAT1-202, Transcript of vesicle amine transport 1, humanhuman

TSL 2 BASIC

Gene VAT1, Length 1,069 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-202ENST00000420567 KYAT1Q16773 422 aa17.28■□□□□ 0.36
VAT1-202ENST00000420567 LEXMQ3ZCV2 418 aa17.28■□□□□ 0.36
VAT1-202ENST00000420567 SLFN12LQ6IEE8 588 aa17.28■□□□□ 0.36
VAT1-202ENST00000420567 TMEM130Q8N3G9 435 aa17.28■□□□□ 0.36
VAT1-202ENST00000420567 FAM212AQ96EL1 285 aa17.28■□□□□ 0.36
VAT1-202ENST00000420567 CDCA3Q99618 268 aaPredicted RBP17.28■□□□□ 0.36
VAT1-202ENST00000420567 RPF1Q9H9Y2 349 aaKnown RBP17.28■□□□□ 0.36
VAT1-202ENST00000420567 SLC38A7Q9NVC3 462 aa17.28■□□□□ 0.36
VAT1-202ENST00000420567 CLEC1BQ9P126 229 aa17.28■□□□□ 0.36
VAT1-202ENST00000420567 STK39Q9UEW8 545 aa17.28■□□□□ 0.36
VAT1-202ENST00000420567 TUBGCP4Q9UGJ1 667 aa17.28■□□□□ 0.36
VAT1-202ENST00000420567 USP25Q9UHP3 1055 aa17.28■□□□□ 0.36
VAT1-202ENST00000420567 CPSF3Q9UKF6 684 aaKnown RBP17.28■□□□□ 0.36
VAT1-202ENST00000420567 AGO2Q9UKV8 859 aaKnown RBP17.28■□□□□ 0.36
VAT1-202ENST00000420567 MYH11P35749 1972 aa17.28■□□□□ 0.36
VAT1-202ENST00000420567 SF3B1O75533 1304 aaKnown RBP eCLIP17.27■□□□□ 0.365e-6■■■■■ 50.1
VAT1-202ENST00000420567 LACTBL1A8MY62 500 aa17.27■□□□□ 0.36
VAT1-202ENST00000420567 PODXLO00592 558 aa17.27■□□□□ 0.36
VAT1-202ENST00000420567 PRR29P0C7W0 189 aa17.27■□□□□ 0.36
VAT1-202ENST00000420567 EHHADHQ08426 723 aa17.27■□□□□ 0.36
VAT1-202ENST00000420567 KIAA1841Q6NSI8 718 aa17.27■□□□□ 0.36
VAT1-202ENST00000420567 KRBA2Q6ZNG9 492 aa17.27■□□□□ 0.36
VAT1-202ENST00000420567 STXBP4Q6ZWJ1 553 aa17.27■□□□□ 0.36
VAT1-202ENST00000420567 TMEM87AQ8NBN3 555 aa17.27■□□□□ 0.36
VAT1-202ENST00000420567 C3orf58Q8NDZ4 430 aa17.27■□□□□ 0.36
VAT1-202ENST00000420567 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.27■□□□□ 0.36
VAT1-202ENST00000420567 SAAL1Q96ER3 474 aa17.27■□□□□ 0.36
VAT1-202ENST00000420567 KIF12Q96FN5 646 aa17.27■□□□□ 0.36
VAT1-202ENST00000420567 UROC1Q96N76 676 aa17.27■□□□□ 0.36
VAT1-202ENST00000420567 TMEM206Q9H813 350 aa17.27■□□□□ 0.36
VAT1-202ENST00000420567 MRPL17Q9NRX2 175 aaKnown RBP17.27■□□□□ 0.36
VAT1-202ENST00000420567 HCFC2Q9Y5Z7 792 aa17.27■□□□□ 0.36
VAT1-202ENST00000420567 IRAK3Q9Y616 596 aa17.27■□□□□ 0.36
VAT1-202ENST00000420567 PVALEFA0A1B0GWK0 134 aa17.26■□□□□ 0.35
VAT1-202ENST00000420567 TTC26A0AVF1 554 aa17.26■□□□□ 0.35
VAT1-202ENST00000420567 GOLGA6L4A6NEF3 574 aa17.26■□□□□ 0.35
VAT1-202ENST00000420567 KLRC4O43908 158 aa17.26■□□□□ 0.35
VAT1-202ENST00000420567 B3GAT3O94766 335 aa17.26■□□□□ 0.35
VAT1-202ENST00000420567 UPP1Q16831 310 aa17.26■□□□□ 0.35
VAT1-202ENST00000420567 DCLRE1AQ6PJP8 1040 aa17.26■□□□□ 0.35
VAT1-202ENST00000420567 EPM2AIP1Q7L775 607 aaPredicted RBP17.26■□□□□ 0.35
VAT1-202ENST00000420567 NELFCDQ8IXH7 590 aa17.26■□□□□ 0.35
VAT1-202ENST00000420567 ZSWIM2Q8NEG5 633 aa17.26■□□□□ 0.35
VAT1-202ENST00000420567 NOC3LQ8WTT2 800 aaKnown RBP17.26■□□□□ 0.35
VAT1-202ENST00000420567 KLHL5Q96PQ7 755 aa17.26■□□□□ 0.35
VAT1-202ENST00000420567 CBWD1Q9BRT8 395 aa17.26■□□□□ 0.35
VAT1-202ENST00000420567 PLEKHA5Q9HAU0 1116 aa17.26■□□□□ 0.35
VAT1-202ENST00000420567 SLC39A2Q9NP94 309 aa17.26■□□□□ 0.35
VAT1-202ENST00000420567 GOLGA8IPA6NC78 632 aa17.25■□□□□ 0.35
VAT1-202ENST00000420567 GOLGA8JA6NMD2 632 aa17.25■□□□□ 0.35
VAT1-202ENST00000420567 I3L4J1 428 aa17.25■□□□□ 0.35
VAT1-202ENST00000420567 TULP1O00294 542 aaPredicted RBP17.25■□□□□ 0.35
VAT1-202ENST00000420567 EIF3DO15371 548 aaKnown RBP eCLIP17.25■□□□□ 0.35
VAT1-202ENST00000420567 LILRB3O75022 631 aa17.25■□□□□ 0.35
VAT1-202ENST00000420567 ZNF202O95125 648 aa17.25■□□□□ 0.35
VAT1-202ENST00000420567 CNPP09543 421 aaKnown RBP17.25■□□□□ 0.35
VAT1-202ENST00000420567 BMP1P13497 986 aa17.25■□□□□ 0.35
VAT1-202ENST00000420567 IL9P15248 144 aa17.25■□□□□ 0.35
VAT1-202ENST00000420567 HOXD13P35453 343 aa17.25■□□□□ 0.35
VAT1-202ENST00000420567 BRCC3P46736 316 aa17.25■□□□□ 0.35
VAT1-202ENST00000420567 GUCY2FP51841 1108 aa17.25■□□□□ 0.35
VAT1-202ENST00000420567 DSG1Q02413 1049 aa17.25■□□□□ 0.35
VAT1-202ENST00000420567 KCNC3Q14003 757 aa17.25■□□□□ 0.35
VAT1-202ENST00000420567 POSTNQ15063 836 aa17.25■□□□□ 0.35
VAT1-202ENST00000420567 USP41Q3LFD5 358 aa17.25■□□□□ 0.35
VAT1-202ENST00000420567 KMT5BQ4FZB7 885 aa17.25■□□□□ 0.35
VAT1-202ENST00000420567 RTP2Q5QGT7 225 aa17.25■□□□□ 0.35
VAT1-202ENST00000420567 FAM171A1Q5VUB5 890 aa17.25■□□□□ 0.35
VAT1-202ENST00000420567 KIAA0319Q5VV43 1072 aa17.25■□□□□ 0.35
VAT1-202ENST00000420567 PTCRAQ6ISU1 281 aaPredicted RBP17.25■□□□□ 0.35
VAT1-202ENST00000420567 CD300LGQ6UXG3 332 aa17.25■□□□□ 0.35
VAT1-202ENST00000420567 CRELD2Q6UXH1 353 aaPredicted RBP17.25■□□□□ 0.35
VAT1-202ENST00000420567 CEP57Q86XR8 500 aa17.25■□□□□ 0.35
VAT1-202ENST00000420567 ADAMTS19Q8TE59 1207 aa17.25■□□□□ 0.35
VAT1-202ENST00000420567 RIN2Q8WYP3 895 aaPredicted RBP17.25■□□□□ 0.35
VAT1-202ENST00000420567 FAM213AQ9BRX8 229 aa17.25■□□□□ 0.35
VAT1-202ENST00000420567 EMILIN2Q9BXX0 1053 aa17.25■□□□□ 0.35
VAT1-202ENST00000420567 PCIF1Q9H4Z3 704 aa17.25■□□□□ 0.35
VAT1-202ENST00000420567 CHST7Q9NS84 486 aa17.25■□□□□ 0.35
VAT1-202ENST00000420567 EXOC1Q9NV70 894 aa17.25■□□□□ 0.35
VAT1-202ENST00000420567 CD207Q9UJ71 328 aa17.25■□□□□ 0.35
VAT1-202ENST00000420567 TDRD15B5MCY1 1934 aaKnown RBP17.24■□□□□ 0.35
VAT1-202ENST00000420567 FSD2A1L4K1 749 aa17.24■□□□□ 0.35
VAT1-202ENST00000420567 TMEM189-UBE2V1I3L0A0 370 aa17.24■□□□□ 0.35
VAT1-202ENST00000420567 TEX28O15482 410 aa17.24■□□□□ 0.35
VAT1-202ENST00000420567 NFICP08651 508 aa17.24■□□□□ 0.35
VAT1-202ENST00000420567 SRGAP2BP0DMP2 458 aa17.24■□□□□ 0.35
VAT1-202ENST00000420567 EPCAMP16422 314 aa17.24■□□□□ 0.35
VAT1-202ENST00000420567 RPL17P18621 184 aaKnown RBP17.24■□□□□ 0.35
VAT1-202ENST00000420567 GARTP22102 1010 aa17.24■□□□□ 0.35
VAT1-202ENST00000420567 KLRC2P26717 231 aa17.24■□□□□ 0.35
VAT1-202ENST00000420567 JADE1Q6IE81 842 aa17.24■□□□□ 0.35
VAT1-202ENST00000420567 ARMCX5Q6P1M9 558 aa17.24■□□□□ 0.35
VAT1-202ENST00000420567 PRSS55Q6UWB4 352 aaPredicted RBP17.24■□□□□ 0.35
VAT1-202ENST00000420567 ZNF507Q8TCN5 953 aa17.24■□□□□ 0.35
VAT1-202ENST00000420567 SCFD1Q8WVM8 642 aa17.24■□□□□ 0.35
VAT1-202ENST00000420567 DDX27Q96GQ7 796 aaKnown RBP17.24■□□□□ 0.35
VAT1-202ENST00000420567 MSLNLQ96KJ4 702 aa17.24■□□□□ 0.35
VAT1-202ENST00000420567 NECAB3Q96P71 396 aaPredicted RBP17.24■□□□□ 0.35
VAT1-202ENST00000420567 APOL5Q9BWW9 433 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms