RNA–Protein interactions for RNA: ENST00000420539.1

PTP4A1P1-201, Transcript of protein tyrosine phosphatase type IVA, member 1 pseudogene 1, humanhuman

BASIC

Gene PTP4A1P1, Length 515 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1P1-201ENST00000420539 IL12RB1P42701 662 aa6.16□□□□□ -1.42
PTP4A1P1-201ENST00000420539 CTCFP49711 727 aaPredicted RBP6.16□□□□□ -1.42
PTP4A1P1-201ENST00000420539 CLCN2P51788 898 aa6.16□□□□□ -1.42
PTP4A1P1-201ENST00000420539 ARF3P61204 181 aaPredicted RBP6.16□□□□□ -1.42
PTP4A1P1-201ENST00000420539 ARF1P84077 181 aaKnown RBP6.16□□□□□ -1.42
PTP4A1P1-201ENST00000420539 TEKQ02763 1124 aa6.16□□□□□ -1.42
PTP4A1P1-201ENST00000420539 UBXN1Q04323 297 aa6.16□□□□□ -1.42
PTP4A1P1-201ENST00000420539 MMEL1Q495T6 779 aa6.16□□□□□ -1.42
PTP4A1P1-201ENST00000420539 SETMARQ53H47 684 aaPredicted RBP6.16□□□□□ -1.42
PTP4A1P1-201ENST00000420539 FAM47CQ5HY64 1035 aa6.16□□□□□ -1.42
PTP4A1P1-201ENST00000420539 RTP2Q5QGT7 225 aa6.16□□□□□ -1.42
PTP4A1P1-201ENST00000420539 RNF111Q6ZNA4 994 aa6.16□□□□□ -1.42
PTP4A1P1-201ENST00000420539 KCNK18Q7Z418 384 aa6.16□□□□□ -1.42
PTP4A1P1-201ENST00000420539 SPRED2Q7Z698 418 aa6.16□□□□□ -1.42
PTP4A1P1-201ENST00000420539 C2CD5Q86YS7 1000 aa6.16□□□□□ -1.42
PTP4A1P1-201ENST00000420539 KSR1Q8IVT5 923 aa6.16□□□□□ -1.42
PTP4A1P1-201ENST00000420539 SIRT2Q8IXJ6 389 aa6.16□□□□□ -1.42
PTP4A1P1-201ENST00000420539 PPIL6Q8IXY8 311 aa6.16□□□□□ -1.42
PTP4A1P1-201ENST00000420539 LINC00116Q8NCU8 138 aa6.16□□□□□ -1.42
PTP4A1P1-201ENST00000420539 TOR1AIP2Q8NFQ8 470 aa6.16□□□□□ -1.42
PTP4A1P1-201ENST00000420539 MISP3Q96FF7 219 aa6.16□□□□□ -1.42
PTP4A1P1-201ENST00000420539 ALG1Q9BT22 464 aa6.16□□□□□ -1.42
PTP4A1P1-201ENST00000420539 PI4K2AQ9BTU6 479 aa6.16□□□□□ -1.42
PTP4A1P1-201ENST00000420539 BRIP1Q9BX63 1249 aa6.16□□□□□ -1.42
PTP4A1P1-201ENST00000420539 PAIP1Q9H074 479 aaKnown RBP6.16□□□□□ -1.42
PTP4A1P1-201ENST00000420539 C2orf40Q9H1Z8 148 aa6.16□□□□□ -1.42
PTP4A1P1-201ENST00000420539 C14orf93Q9H972 538 aaKnown RBP6.16□□□□□ -1.42
PTP4A1P1-201ENST00000420539 ZMAT3Q9HA38 289 aaKnown RBP6.16□□□□□ -1.42
PTP4A1P1-201ENST00000420539 PRDM7Q9NQW5 492 aa6.16□□□□□ -1.42
PTP4A1P1-201ENST00000420539 KCND1Q9NSA2 647 aa6.16□□□□□ -1.42
PTP4A1P1-201ENST00000420539 CLEC1BQ9P126 229 aa6.16□□□□□ -1.42
PTP4A1P1-201ENST00000420539 GTF3C4Q9UKN8 822 aa6.16□□□□□ -1.42
PTP4A1P1-201ENST00000420539 ARHGAP26Q9UNA1 814 aa6.16□□□□□ -1.42
PTP4A1P1-201ENST00000420539 AGTPBP1Q9UPW5 1226 aa6.16□□□□□ -1.42
PTP4A1P1-201ENST00000420539 ATP23Q9Y6H3 246 aa6.16□□□□□ -1.42
PTP4A1P1-201ENST00000420539 ZFP37Q9Y6Q3 630 aaPredicted RBP6.16□□□□□ -1.42
PTP4A1P1-201ENST00000420539 A0A088AWK7 358 aa6.15□□□□□ -1.42
PTP4A1P1-201ENST00000420539 P4HA1P13674 534 aa6.15□□□□□ -1.42
PTP4A1P1-201ENST00000420539 HNF4AP41235 474 aa6.15□□□□□ -1.42
PTP4A1P1-201ENST00000420539 EVCP57679 992 aa6.15□□□□□ -1.42
PTP4A1P1-201ENST00000420539 VAMP2P63027 116 aa6.15□□□□□ -1.42
PTP4A1P1-201ENST00000420539 CALD1Q05682 793 aaKnown RBP6.15□□□□□ -1.42
PTP4A1P1-201ENST00000420539 ZP2Q05996 745 aa6.15□□□□□ -1.42
PTP4A1P1-201ENST00000420539 AP1B1Q10567 949 aa6.15□□□□□ -1.42
PTP4A1P1-201ENST00000420539 FSCN1Q16658 493 aaKnown RBP6.15□□□□□ -1.42
PTP4A1P1-201ENST00000420539 UBXN11Q5T124 520 aa6.15□□□□□ -1.42
PTP4A1P1-201ENST00000420539 ANGEL2Q5VTE6 544 aaKnown RBP6.15□□□□□ -1.42
PTP4A1P1-201ENST00000420539 LIN54Q6MZP7 749 aa6.15□□□□□ -1.42
PTP4A1P1-201ENST00000420539 RAPH1Q70E73 1250 aa6.15□□□□□ -1.42
PTP4A1P1-201ENST00000420539 CCDC91Q7Z6B0 441 aa6.15□□□□□ -1.42
PTP4A1P1-201ENST00000420539 NBPF5PQ86XG9 351 aaPredicted RBP6.15□□□□□ -1.42
PTP4A1P1-201ENST00000420539 HERC6Q8IVU3 1022 aa6.15□□□□□ -1.42
PTP4A1P1-201ENST00000420539 TXLNBQ8N3L3 684 aa6.15□□□□□ -1.42
PTP4A1P1-201ENST00000420539 MARCH10Q8NA82 808 aaPredicted RBP6.15□□□□□ -1.42
PTP4A1P1-201ENST00000420539 PLBD2Q8NHP8 589 aa6.15□□□□□ -1.42
PTP4A1P1-201ENST00000420539 STT3BQ8TCJ2 826 aa6.15□□□□□ -1.42
PTP4A1P1-201ENST00000420539 CREB3L4Q8TEY5 395 aa6.15□□□□□ -1.42
PTP4A1P1-201ENST00000420539 RUFY2Q8WXA3 655 aa6.15□□□□□ -1.42
PTP4A1P1-201ENST00000420539 EYA3Q99504 573 aa6.15□□□□□ -1.42
PTP4A1P1-201ENST00000420539 HEPHQ9BQS7 1158 aa6.15□□□□□ -1.42
PTP4A1P1-201ENST00000420539 PDCD2LQ9BRP1 358 aa6.15□□□□□ -1.42
PTP4A1P1-201ENST00000420539 SENP6Q9GZR1 1112 aaPredicted RBP6.15□□□□□ -1.42
PTP4A1P1-201ENST00000420539 VPS33BQ9H267 617 aa6.15□□□□□ -1.42
PTP4A1P1-201ENST00000420539 KCTD10Q9H3F6 313 aa6.15□□□□□ -1.42
PTP4A1P1-201ENST00000420539 ACAD9Q9H845 621 aa6.15□□□□□ -1.42
PTP4A1P1-201ENST00000420539 ZMAT4Q9H898 229 aa6.15□□□□□ -1.42
PTP4A1P1-201ENST00000420539 ZNF287Q9HBT7 754 aa6.15□□□□□ -1.42
PTP4A1P1-201ENST00000420539 CCDC177Q9NQR7 707 aaPredicted RBP6.15□□□□□ -1.42
PTP4A1P1-201ENST00000420539 GPR27Q9NS67 375 aa6.15□□□□□ -1.42
PTP4A1P1-201ENST00000420539 GJB4Q9NTQ9 266 aa6.15□□□□□ -1.42
PTP4A1P1-201ENST00000420539 TMEM160Q9NX00 188 aa6.15□□□□□ -1.42
PTP4A1P1-201ENST00000420539 SLAMF8Q9P0V8 285 aa6.15□□□□□ -1.42
PTP4A1P1-201ENST00000420539 RABL2AQ9UBK7 228 aaPredicted RBP6.15□□□□□ -1.42
PTP4A1P1-201ENST00000420539 RPS6KA6Q9UK32 745 aa6.15□□□□□ -1.42
PTP4A1P1-201ENST00000420539 ANGEL1Q9UNK9 670 aaKnown RBP6.15□□□□□ -1.42
PTP4A1P1-201ENST00000420539 SMC3Q9UQE7 1217 aa6.15□□□□□ -1.42
PTP4A1P1-201ENST00000420539 MTF2Q9Y483 593 aaPredicted RBP6.15□□□□□ -1.42
PTP4A1P1-201ENST00000420539 NR2E3Q9Y5X4 410 aa6.15□□□□□ -1.42
PTP4A1P1-201ENST00000420539 NPFFR2Q9Y5X5 522 aa6.15□□□□□ -1.42
PTP4A1P1-201ENST00000420539 A0A0B4J269 797 aa6.14□□□□□ -1.43
PTP4A1P1-201ENST00000420539 hCG_1807616A0A1W2PRN6 198 aa6.14□□□□□ -1.43
PTP4A1P1-201ENST00000420539 TMEM82A0PJX8 343 aa6.14□□□□□ -1.43
PTP4A1P1-201ENST00000420539 AQP12BA6NM10 295 aa6.14□□□□□ -1.43
PTP4A1P1-201ENST00000420539 H0Y626 953 aa6.14□□□□□ -1.43
PTP4A1P1-201ENST00000420539 DVL2O14641 736 aa6.14□□□□□ -1.43
PTP4A1P1-201ENST00000420539 WNT9AO14904 365 aa6.14□□□□□ -1.43
PTP4A1P1-201ENST00000420539 TBCAO75347 108 aaKnown RBP6.14□□□□□ -1.43
PTP4A1P1-201ENST00000420539 RARBP10826 455 aa6.14□□□□□ -1.43
PTP4A1P1-201ENST00000420539 PLS3P13797 630 aa6.14□□□□□ -1.43
PTP4A1P1-201ENST00000420539 CHMP24386 653 aa6.14□□□□□ -1.43
PTP4A1P1-201ENST00000420539 EDNRBP24530 442 aa6.14□□□□□ -1.43
PTP4A1P1-201ENST00000420539 ATP5F1P24539 256 aaPredicted RBP6.14□□□□□ -1.43
PTP4A1P1-201ENST00000420539 ATP5DP30049 168 aa6.14□□□□□ -1.43
PTP4A1P1-201ENST00000420539 CCR5P51681 352 aa6.14□□□□□ -1.43
PTP4A1P1-201ENST00000420539 SLC12A2P55011 1212 aa6.14□□□□□ -1.43
PTP4A1P1-201ENST00000420539 RAB1AP62820 205 aa6.14□□□□□ -1.43
PTP4A1P1-201ENST00000420539 ST5P78524 1137 aa6.14□□□□□ -1.43
PTP4A1P1-201ENST00000420539 FOXO4P98177 505 aa6.14□□□□□ -1.43
PTP4A1P1-201ENST00000420539 PPARDQ03181 441 aa6.14□□□□□ -1.43
PTP4A1P1-201ENST00000420539 IFT88Q13099 833 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms