RNA–Protein interactions for RNA: ENST00000420363.5

CPNE1-211, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-211ENST00000420363 A0A0B4J269 797 aa23.32■■□□□ 1.32
CPNE1-211ENST00000420363 CASTOR2A6NHX0 329 aa23.32■■□□□ 1.32
CPNE1-211ENST00000420363 OGTO15294 1046 aa23.32■■□□□ 1.32
CPNE1-211ENST00000420363 CXCL14O95715 111 aa23.32■■□□□ 1.32
CPNE1-211ENST00000420363 CLTAP09496 248 aa23.32■■□□□ 1.32
CPNE1-211ENST00000420363 ZC2HC1CQ53FD0 456 aaPredicted RBP23.32■■□□□ 1.32
CPNE1-211ENST00000420363 GLRA4Q5JXX5 417 aa23.32■■□□□ 1.32
CPNE1-211ENST00000420363 L1TD1Q5T7N2 865 aaKnown RBP23.32■■□□□ 1.32
CPNE1-211ENST00000420363 VN1R2Q8NFZ6 395 aa23.32■■□□□ 1.32
CPNE1-211ENST00000420363 C7orf25Q9BPX7 421 aa23.32■■□□□ 1.32
CPNE1-211ENST00000420363 PHF7Q9BWX1 381 aaPredicted RBP23.32■■□□□ 1.32
CPNE1-211ENST00000420363 KCNH6Q9H252 994 aa23.32■■□□□ 1.32
CPNE1-211ENST00000420363 MRPL17Q9NRX2 175 aaKnown RBP23.32■■□□□ 1.32
CPNE1-211ENST00000420363 EXOC7Q9UPT5 735 aa23.32■■□□□ 1.32
CPNE1-211ENST00000420363 PCDHB13Q9Y5F0 798 aa23.32■■□□□ 1.32
CPNE1-211ENST00000420363 FAM237AA0A1B0GTK4 181 aa23.31■■□□□ 1.32
CPNE1-211ENST00000420363 LOC730098B7Z3J9 87 aa23.31■■□□□ 1.32
CPNE1-211ENST00000420363 F8W810 466 aa23.31■■□□□ 1.32
CPNE1-211ENST00000420363 LILRB3O75022 631 aa23.31■■□□□ 1.32
CPNE1-211ENST00000420363 KIF4AO95239 1232 aa23.31■■□□□ 1.32
CPNE1-211ENST00000420363 GLUD2P49448 558 aa23.31■■□□□ 1.32
CPNE1-211ENST00000420363 RBM10P98175 930 aaKnown RBP23.31■■□□□ 1.32
CPNE1-211ENST00000420363 DSG1Q02413 1049 aa23.31■■□□□ 1.32
CPNE1-211ENST00000420363 ELAVL2Q12926 359 aaKnown RBP23.31■■□□□ 1.32
CPNE1-211ENST00000420363 SLFN12LQ6IEE8 588 aa23.31■■□□□ 1.32
CPNE1-211ENST00000420363 ALYREFQ86V81 257 aaKnown RBP23.31■■□□□ 1.32
CPNE1-211ENST00000420363 CASP10Q92851 521 aa23.31■■□□□ 1.32
CPNE1-211ENST00000420363 TSPAN18Q96SJ8 248 aa23.31■■□□□ 1.32
CPNE1-211ENST00000420363 PAAF1Q9BRP4 392 aa23.31■■□□□ 1.32
CPNE1-211ENST00000420363 EMILIN2Q9BXX0 1053 aa23.31■■□□□ 1.32
CPNE1-211ENST00000420363 CHST7Q9NS84 486 aa23.31■■□□□ 1.32
CPNE1-211ENST00000420363 USP25Q9UHP3 1055 aa23.31■■□□□ 1.32
CPNE1-211ENST00000420363 HPSEQ9Y251 543 aa23.31■■□□□ 1.32
CPNE1-211ENST00000420363 MEFVO15553 781 aaPredicted RBP23.3■■□□□ 1.32
CPNE1-211ENST00000420363 CLASP2O75122 1294 aaKnown RBP23.3■■□□□ 1.32
CPNE1-211ENST00000420363 GCNT3O95395 438 aa23.3■■□□□ 1.32
CPNE1-211ENST00000420363 PFKFB1P16118 471 aa23.3■■□□□ 1.32
CPNE1-211ENST00000420363 CA8P35219 290 aa23.3■■□□□ 1.32
CPNE1-211ENST00000420363 ASIC1P78348 528 aa23.3■■□□□ 1.32
CPNE1-211ENST00000420363 POU5F1Q01860 360 aaKnown RBP23.3■■□□□ 1.32
CPNE1-211ENST00000420363 SLC10A6Q3KNW5 377 aa23.3■■□□□ 1.32
CPNE1-211ENST00000420363 PPFIBP1Q86W92 1011 aa23.3■■□□□ 1.32
CPNE1-211ENST00000420363 AUTS2Q8WXX7 1259 aa23.3■■□□□ 1.32
CPNE1-211ENST00000420363 STAMQ92783 540 aa23.3■■□□□ 1.32
CPNE1-211ENST00000420363 CHAMP1Q96JM3 812 aa23.3■■□□□ 1.32
CPNE1-211ENST00000420363 RPGRIP1Q96KN7 1286 aa23.3■■□□□ 1.32
CPNE1-211ENST00000420363 FBXL18Q96ME1 805 aa23.3■■□□□ 1.32
CPNE1-211ENST00000420363 ZMAT2Q96NC0 199 aaKnown RBP23.3■■□□□ 1.32
CPNE1-211ENST00000420363 ACCSQ96QU6 501 aa23.3■■□□□ 1.32
CPNE1-211ENST00000420363 MSTO1Q9BUK6 570 aa23.3■■□□□ 1.32
CPNE1-211ENST00000420363 HCFC2Q9Y5Z7 792 aa23.3■■□□□ 1.32
CPNE1-211ENST00000420363 PIEZO1Q92508 2521 aa23.3■■□□□ 1.32
CPNE1-211ENST00000420363 A0A1W2PQ27 194 aa23.29■■□□□ 1.32
CPNE1-211ENST00000420363 A0A1W2PQ64 194 aa23.29■■□□□ 1.32
CPNE1-211ENST00000420363 A0A1W2PQD8 194 aa23.29■■□□□ 1.32
CPNE1-211ENST00000420363 TTC26A0AVF1 554 aa23.29■■□□□ 1.32
CPNE1-211ENST00000420363 ACTN4O43707 911 aaKnown RBP23.29■■□□□ 1.32
CPNE1-211ENST00000420363 TADA2AO75478 443 aa23.29■■□□□ 1.32
CPNE1-211ENST00000420363 ADRB2P07550 413 aa23.29■■□□□ 1.32
CPNE1-211ENST00000420363 SLFN14P0C7P3 912 aa23.29■■□□□ 1.32
CPNE1-211ENST00000420363 CXCL8P10145 99 aa23.29■■□□□ 1.32
CPNE1-211ENST00000420363 HOXB8P17481 243 aaPredicted RBP23.29■■□□□ 1.32
CPNE1-211ENST00000420363 CASP5P51878 434 aa23.29■■□□□ 1.32
CPNE1-211ENST00000420363 CREMQ03060 361 aa23.29■■□□□ 1.32
CPNE1-211ENST00000420363 PPP2R3AQ06190 1150 aa23.29■■□□□ 1.32
CPNE1-211ENST00000420363 UPP1Q16831 310 aa23.29■■□□□ 1.32
CPNE1-211ENST00000420363 USP41Q3LFD5 358 aa23.29■■□□□ 1.32
CPNE1-211ENST00000420363 STXBP4Q6ZWJ1 553 aa23.29■■□□□ 1.32
CPNE1-211ENST00000420363 UNC13DQ70J99 1090 aa23.29■■□□□ 1.32
CPNE1-211ENST00000420363 CEP57L1Q8IYX8 460 aa23.29■■□□□ 1.32
CPNE1-211ENST00000420363 DDX27Q96GQ7 796 aaKnown RBP23.29■■□□□ 1.32
CPNE1-211ENST00000420363 GPR62Q9BZJ7 368 aa23.29■■□□□ 1.32
CPNE1-211ENST00000420363 RXFP1Q9HBX9 757 aa23.29■■□□□ 1.32
CPNE1-211ENST00000420363 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.29■■□□□ 1.32
CPNE1-211ENST00000420363 CACNG4Q9UBN1 327 aa23.29■■□□□ 1.32
CPNE1-211ENST00000420363 TRIOO75962 3097 aa23.28■■□□□ 1.32
CPNE1-211ENST00000420363 C1RP00736 705 aa23.28■■□□□ 1.32
CPNE1-211ENST00000420363 MYBP10242 640 aa23.28■■□□□ 1.32
CPNE1-211ENST00000420363 EHHADHQ08426 723 aa23.28■■□□□ 1.32
CPNE1-211ENST00000420363 CBX2Q14781 532 aaPredicted RBP23.28■■□□□ 1.32
CPNE1-211ENST00000420363 POSTNQ15063 836 aa23.28■■□□□ 1.32
CPNE1-211ENST00000420363 KIAA0319Q5VV43 1072 aa23.28■■□□□ 1.32
CPNE1-211ENST00000420363 DCLRE1AQ6PJP8 1040 aa23.28■■□□□ 1.32
CPNE1-211ENST00000420363 TRIM67Q6ZTA4 783 aa23.28■■□□□ 1.32
CPNE1-211ENST00000420363 CD302Q8IX05 232 aa23.28■■□□□ 1.32
CPNE1-211ENST00000420363 TMEM87AQ8NBN3 555 aa23.28■■□□□ 1.32
CPNE1-211ENST00000420363 DZANK1Q9NVP4 752 aa23.28■■□□□ 1.32
CPNE1-211ENST00000420363 TBC1D7Q9P0N9 293 aa23.28■■□□□ 1.32
CPNE1-211ENST00000420363 CPSF3Q9UKF6 684 aaKnown RBP23.28■■□□□ 1.32
CPNE1-211ENST00000420363 ANK1P16157 1881 aa23.28■■□□□ 1.32
CPNE1-211ENST00000420363 ANKRD63C9JTQ0 380 aa23.27■■□□□ 1.32
CPNE1-211ENST00000420363 EIF3DO15371 548 aaKnown RBP eCLIP23.27■■□□□ 1.32
CPNE1-211ENST00000420363 RPL9P32969 192 aaKnown RBP23.27■■□□□ 1.32
CPNE1-211ENST00000420363 CLCNKBP51801 687 aa23.27■■□□□ 1.32
CPNE1-211ENST00000420363 SOX4Q06945 474 aaPredicted RBP23.27■■□□□ 1.32
CPNE1-211ENST00000420363 ENOX2Q16206 610 aaKnown RBP23.27■■□□□ 1.32
CPNE1-211ENST00000420363 SEZ6Q53EL9 994 aa23.27■■□□□ 1.32
CPNE1-211ENST00000420363 KIAA1841Q6NSI8 718 aa23.27■■□□□ 1.32
CPNE1-211ENST00000420363 ANKRD54Q6NXT1 300 aa23.27■■□□□ 1.32
CPNE1-211ENST00000420363 LLGL2Q6P1M3 1020 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms