RNA–Protein interactions for RNA: ENST00000419981.1

PTCD1-202, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-202ENST00000419981 UPP1Q16831 310 aa18.97■□□□□ 0.63
PTCD1-202ENST00000419981 C8orf34Q49A92 452 aa18.97■□□□□ 0.63
PTCD1-202ENST00000419981 RINT1Q6NUQ1 792 aa18.97■□□□□ 0.63
PTCD1-202ENST00000419981 DAW1Q8N136 415 aa18.97■□□□□ 0.63
PTCD1-202ENST00000419981 SLC7A14Q8TBB6 771 aa18.97■□□□□ 0.63
PTCD1-202ENST00000419981 RUSC1Q9BVN2 902 aa18.97■□□□□ 0.63
PTCD1-202ENST00000419981 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.97■□□□□ 0.63
PTCD1-202ENST00000419981 ARHGAP28Q9P2N2 729 aa18.97■□□□□ 0.63
PTCD1-202ENST00000419981 NUMBLQ9Y6R0 609 aa18.97■□□□□ 0.63
PTCD1-202ENST00000419981 SMIM28A0A1B0GU29 152 aa18.96■□□□□ 0.63
PTCD1-202ENST00000419981 TKTP29401 623 aaKnown RBP18.96■□□□□ 0.63
PTCD1-202ENST00000419981 CDC25AP30304 524 aa18.96■□□□□ 0.63
PTCD1-202ENST00000419981 OSTNP61366 133 aa18.96■□□□□ 0.63
PTCD1-202ENST00000419981 NTHL1P78549 312 aa18.96■□□□□ 0.63
PTCD1-202ENST00000419981 IL17AQ16552 155 aa18.96■□□□□ 0.63
PTCD1-202ENST00000419981 UVSSAQ2YD98 709 aa18.96■□□□□ 0.63
PTCD1-202ENST00000419981 AXDND1Q5T1B0 1012 aaPredicted RBP18.96■□□□□ 0.63
PTCD1-202ENST00000419981 MCTP1Q6DN14 999 aa18.96■□□□□ 0.63
PTCD1-202ENST00000419981 C1orf186Q6ZWK4 172 aa18.96■□□□□ 0.63
PTCD1-202ENST00000419981 TAS1R3Q7RTX0 852 aa18.96■□□□□ 0.63
PTCD1-202ENST00000419981 DTWD2Q8NBA8 298 aa18.96■□□□□ 0.63
PTCD1-202ENST00000419981 GPR152Q8TDT2 470 aa18.96■□□□□ 0.63
PTCD1-202ENST00000419981 DDX27Q96GQ7 796 aaKnown RBP18.96■□□□□ 0.63
PTCD1-202ENST00000419981 MMTAG2Q9BU76 263 aaKnown RBP18.96■□□□□ 0.63
PTCD1-202ENST00000419981 C17orf75Q9HAS0 396 aa18.96■□□□□ 0.63
PTCD1-202ENST00000419981 PTPRHQ9HD43 1115 aa18.96■□□□□ 0.63
PTCD1-202ENST00000419981 SLC38A7Q9NVC3 462 aa18.96■□□□□ 0.63
PTCD1-202ENST00000419981 CDH7Q9ULB5 785 aa18.96■□□□□ 0.63
PTCD1-202ENST00000419981 RBM19Q9Y4C8 960 aaKnown RBP18.96■□□□□ 0.63
PTCD1-202ENST00000419981 CDY1Q9Y6F8 540 aa18.96■□□□□ 0.63
PTCD1-202ENST00000419981 POU2F2P09086 479 aa18.95■□□□□ 0.62
PTCD1-202ENST00000419981 IGFBP6P24592 240 aaPredicted RBP18.95■□□□□ 0.62
PTCD1-202ENST00000419981 BRCC3P46736 316 aa18.95■□□□□ 0.62
PTCD1-202ENST00000419981 SOX4Q06945 474 aaPredicted RBP18.95■□□□□ 0.62
PTCD1-202ENST00000419981 MAPK7Q13164 816 aa18.95■□□□□ 0.62
PTCD1-202ENST00000419981 ANGPT1Q15389 498 aa18.95■□□□□ 0.62
PTCD1-202ENST00000419981 RILPL1Q5EBL4 403 aa18.95■□□□□ 0.62
PTCD1-202ENST00000419981 XKR4Q5GH76 650 aa18.95■□□□□ 0.62
PTCD1-202ENST00000419981 CD300LGQ6UXG3 332 aa18.95■□□□□ 0.62
PTCD1-202ENST00000419981 ALKAL1Q6UXT8 129 aa18.95■□□□□ 0.62
PTCD1-202ENST00000419981 ANKS3Q6ZW76 656 aa18.95■□□□□ 0.62
PTCD1-202ENST00000419981 ASCL5Q7RTU5 278 aa18.95■□□□□ 0.62
PTCD1-202ENST00000419981 KCNK18Q7Z418 384 aa18.95■□□□□ 0.62
PTCD1-202ENST00000419981 C3orf58Q8NDZ4 430 aa18.95■□□□□ 0.62
PTCD1-202ENST00000419981 TIPINQ9BVW5 301 aa18.95■□□□□ 0.62
PTCD1-202ENST00000419981 TARS2Q9BW92 718 aaKnown RBP18.95■□□□□ 0.62
PTCD1-202ENST00000419981 TBC1D17Q9HA65 648 aa18.95■□□□□ 0.62
PTCD1-202ENST00000419981 SLC2A4RGQ9NR83 387 aa18.95■□□□□ 0.62
PTCD1-202ENST00000419981 BACE2Q9Y5Z0 518 aa18.95■□□□□ 0.62
PTCD1-202ENST00000419981 MYO15AQ9UKN7 3530 aa18.95■□□□□ 0.62
PTCD1-202ENST00000419981 TICRRQ7Z2Z1 1910 aa18.95■□□□□ 0.62
PTCD1-202ENST00000419981 PRR23AA6NEV1 266 aa18.94■□□□□ 0.62
PTCD1-202ENST00000419981 I3L4J1 428 aa18.94■□□□□ 0.62
PTCD1-202ENST00000419981 SLC16A4O15374 487 aa18.94■□□□□ 0.62
PTCD1-202ENST00000419981 MCF2P10911 925 aa18.94■□□□□ 0.62
PTCD1-202ENST00000419981 PROZP22891 400 aa18.94■□□□□ 0.62
PTCD1-202ENST00000419981 RABEP1Q15276 862 aa18.94■□□□□ 0.62
PTCD1-202ENST00000419981 ZRSR1Q15695 479 aaKnown RBP18.94■□□□□ 0.62
PTCD1-202ENST00000419981 MPZL3Q6UWV2 235 aa18.94■□□□□ 0.62
PTCD1-202ENST00000419981 MTSS1LQ765P7 747 aa18.94■□□□□ 0.62
PTCD1-202ENST00000419981 RTL10Q7L3V2 364 aa18.94■□□□□ 0.62
PTCD1-202ENST00000419981 FRMD5Q7Z6J6 570 aa18.94■□□□□ 0.62
PTCD1-202ENST00000419981 ST13P5Q8NFI4 369 aaPredicted RBP18.94■□□□□ 0.62
PTCD1-202ENST00000419981 FGF13Q92913 245 aa18.94■□□□□ 0.62
PTCD1-202ENST00000419981 FGF14Q92915 247 aa18.94■□□□□ 0.62
PTCD1-202ENST00000419981 SNX27Q96L92 541 aa18.94■□□□□ 0.62
PTCD1-202ENST00000419981 ACAP3Q96P50 834 aa18.94■□□□□ 0.62
PTCD1-202ENST00000419981 TCHPQ9BT92 498 aa18.94■□□□□ 0.62
PTCD1-202ENST00000419981 ARHGEF3Q9NR81 526 aa18.94■□□□□ 0.62
PTCD1-202ENST00000419981 TSC2P49815 1807 aa18.94■□□□□ 0.62
PTCD1-202ENST00000419981 COL4A3Q01955 1670 aa18.94■□□□□ 0.62
PTCD1-202ENST00000419981 CACNA1IQ9P0X4 2223 aa18.93■□□□□ 0.62
PTCD1-202ENST00000419981 PODXLO00592 558 aa18.93■□□□□ 0.62
PTCD1-202ENST00000419981 HARSP12081 509 aaKnown RBP18.93■□□□□ 0.62
PTCD1-202ENST00000419981 GUCY2CP25092 1073 aa18.93■□□□□ 0.62
PTCD1-202ENST00000419981 ATP2C1P98194 919 aaPredicted RBP18.93■□□□□ 0.62
PTCD1-202ENST00000419981 STRN3Q13033 797 aa18.93■□□□□ 0.62
PTCD1-202ENST00000419981 HYIQ5T013 277 aa18.93■□□□□ 0.62
PTCD1-202ENST00000419981 PHLDB3Q6NSJ2 640 aa18.93■□□□□ 0.62
PTCD1-202ENST00000419981 PARM1Q6UWI2 310 aa18.93■□□□□ 0.62
PTCD1-202ENST00000419981 RSPO2Q6UXX9 243 aaPredicted RBP18.93■□□□□ 0.62
PTCD1-202ENST00000419981 NKD2Q969F2 451 aaPredicted RBP18.93■□□□□ 0.62
PTCD1-202ENST00000419981 ZMAT2Q96NC0 199 aaKnown RBP18.93■□□□□ 0.62
PTCD1-202ENST00000419981 HCFC1R1Q9NWW0 138 aa18.93■□□□□ 0.62
PTCD1-202ENST00000419981 ZFHX2Q9C0A1 2572 aaPredicted RBP18.93■□□□□ 0.62
PTCD1-202ENST00000419981 FAM186AA6NE01 2351 aa18.93■□□□□ 0.62
PTCD1-202ENST00000419981 VPS13AQ96RL7 3174 aa18.92■□□□□ 0.62
PTCD1-202ENST00000419981 SFI1A8K8P3 1242 aa18.92■□□□□ 0.62
PTCD1-202ENST00000419981 ABLIM1O14639 778 aa18.92■□□□□ 0.62
PTCD1-202ENST00000419981 KCNE1P15382 129 aa18.92■□□□□ 0.62
PTCD1-202ENST00000419981 RAD51AP2Q09MP3 1159 aa18.92■□□□□ 0.62
PTCD1-202ENST00000419981 PABPC1LQ4VXU2 614 aaKnown RBP18.92■□□□□ 0.62
PTCD1-202ENST00000419981 ITFG1Q8TB96 612 aa18.92■□□□□ 0.62
PTCD1-202ENST00000419981 NTPCRQ9BSD7 190 aaKnown RBP18.92■□□□□ 0.62
PTCD1-202ENST00000419981 CNTN3Q9P232 1028 aa18.92■□□□□ 0.62
PTCD1-202ENST00000419981 ANKFY1Q9P2R3 1169 aa18.92■□□□□ 0.62
PTCD1-202ENST00000419981 DNMT3BQ9UBC3 853 aaKnown RBP18.92■□□□□ 0.62
PTCD1-202ENST00000419981 KCNG1Q9UIX4 513 aa18.92■□□□□ 0.62
PTCD1-202ENST00000419981 CFAP54Q96N23 3096 aa18.92■□□□□ 0.62
PTCD1-202ENST00000419981 NUP210Q8TEM1 1887 aaPredicted RBP18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms