RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 GOLGA6L6A8MZA4 724 aa3.38□□□□□ -1.87
VPS41-206ENST00000418457 WNT10BO00744 389 aa3.38□□□□□ -1.87
VPS41-206ENST00000418457 SLC16A6O15403 523 aa3.38□□□□□ -1.87
VPS41-206ENST00000418457 ARIH2O95376 493 aa3.38□□□□□ -1.87
VPS41-206ENST00000418457 FTLP02792 175 aaPredicted RBP3.38□□□□□ -1.87
VPS41-206ENST00000418457 ATF3P18847 181 aa3.38□□□□□ -1.87
VPS41-206ENST00000418457 MAN2A2P49641 1150 aa3.38□□□□□ -1.87
VPS41-206ENST00000418457 FXR1P51114 621 aaKnown RBP eCLIP3.38□□□□□ -1.87
VPS41-206ENST00000418457 RAP2BP61225 183 aa3.38□□□□□ -1.87
VPS41-206ENST00000418457 CREMQ03060 361 aa3.38□□□□□ -1.87
VPS41-206ENST00000418457 TLE1Q04724 770 aa3.38□□□□□ -1.87
VPS41-206ENST00000418457 EFEMP1Q12805 493 aa3.38□□□□□ -1.87
VPS41-206ENST00000418457 CRHR2Q13324 411 aa3.38□□□□□ -1.87
VPS41-206ENST00000418457 CNGB1Q14028 1251 aaPredicted RBP3.38□□□□□ -1.87
VPS41-206ENST00000418457 PRKD1Q15139 912 aaPredicted RBP3.38□□□□□ -1.87
VPS41-206ENST00000418457 SPATS1Q496A3 300 aa3.38□□□□□ -1.87
VPS41-206ENST00000418457 MINDY4Q4G0A6 757 aa3.38□□□□□ -1.87
VPS41-206ENST00000418457 KHDC1Q4VXA5 237 aaKnown RBP3.38□□□□□ -1.87
VPS41-206ENST00000418457 CCDC157Q569K6 752 aa3.38□□□□□ -1.87
VPS41-206ENST00000418457 ATXN7L2Q5T6C5 722 aaPredicted RBP3.38□□□□□ -1.87
VPS41-206ENST00000418457 EFCAB12Q6NXP0 572 aa3.38□□□□□ -1.87
VPS41-206ENST00000418457 SEM1Q6ZVN7 128 aa3.38□□□□□ -1.87
VPS41-206ENST00000418457 GPRIN1Q7Z2K8 1008 aa3.38□□□□□ -1.87
VPS41-206ENST00000418457 PLXDC1Q8IUK5 500 aa3.38□□□□□ -1.87
VPS41-206ENST00000418457 PALM2Q8IXS6 379 aa3.38□□□□□ -1.87
VPS41-206ENST00000418457 CAMKK1Q8N5S9 505 aa3.38□□□□□ -1.87
VPS41-206ENST00000418457 C3orf20Q8ND61 904 aa3.38□□□□□ -1.87
VPS41-206ENST00000418457 SLC35G2Q8TBE7 412 aa3.38□□□□□ -1.87
VPS41-206ENST00000418457 DIS3LQ8TF46 1054 aaKnown RBP3.38□□□□□ -1.87
VPS41-206ENST00000418457 DVL3Q92997 716 aaPredicted RBP3.38□□□□□ -1.87
VPS41-206ENST00000418457 PGBD4Q96DM1 585 aa3.38□□□□□ -1.87
VPS41-206ENST00000418457 CDK5RAP1Q96SZ6 601 aaKnown RBP3.38□□□□□ -1.87
VPS41-206ENST00000418457 MNTQ99583 582 aa3.38□□□□□ -1.87
VPS41-206ENST00000418457 VRK1Q99986 396 aaPredicted RBP3.38□□□□□ -1.87
VPS41-206ENST00000418457 GPR87Q9BY21 358 aa3.38□□□□□ -1.87
VPS41-206ENST00000418457 CPEB1Q9BZB8 566 aaKnown RBP3.38□□□□□ -1.87
VPS41-206ENST00000418457 C11orf54Q9H0W9 315 aaPredicted RBP3.38□□□□□ -1.87
VPS41-206ENST00000418457 ANLNQ9NQW6 1124 aa3.38□□□□□ -1.87
VPS41-206ENST00000418457 POGKQ9P215 609 aa3.38□□□□□ -1.87
VPS41-206ENST00000418457 POLHQ9Y253 713 aa3.38□□□□□ -1.87
VPS41-206ENST00000418457 ARAP1Q96P48 1450 aa3.37□□□□□ -1.87
VPS41-206ENST00000418457 PRXQ9BXM0 1461 aa3.37□□□□□ -1.87
VPS41-206ENST00000418457 RAPGEF2Q9Y4G8 1499 aa3.37□□□□□ -1.87
VPS41-206ENST00000418457 KRTAP23-1A1A580 65 aa3.37□□□□□ -1.87
VPS41-206ENST00000418457 ERC2O15083 957 aa3.37□□□□□ -1.87
VPS41-206ENST00000418457 KIAA0391O15091 583 aaKnown RBP3.37□□□□□ -1.87
VPS41-206ENST00000418457 MARCH6O60337 910 aa3.37□□□□□ -1.87
VPS41-206ENST00000418457 CTNND1O60716 968 aaKnown RBP3.37□□□□□ -1.87
VPS41-206ENST00000418457 POMCP01189 267 aa3.37□□□□□ -1.87
VPS41-206ENST00000418457 AMHP03971 560 aa3.37□□□□□ -1.87
VPS41-206ENST00000418457 ALAS1P13196 640 aa3.37□□□□□ -1.87
VPS41-206ENST00000418457 ACRV1P26436 265 aa3.37□□□□□ -1.87
VPS41-206ENST00000418457 MGAT1P26572 445 aa3.37□□□□□ -1.87
VPS41-206ENST00000418457 SMARCA1P28370 1054 aa3.37□□□□□ -1.87
VPS41-206ENST00000418457 IL12RB1P42701 662 aa3.37□□□□□ -1.87
VPS41-206ENST00000418457 SCNN1GP51170 649 aa3.37□□□□□ -1.87
VPS41-206ENST00000418457 MAP2K6P52564 334 aa3.37□□□□□ -1.87
VPS41-206ENST00000418457 RABGGTBP53611 331 aa3.37□□□□□ -1.87
VPS41-206ENST00000418457 ZNF280AP59817 542 aaPredicted RBP3.37□□□□□ -1.87
VPS41-206ENST00000418457 ADAM17P78536 824 aa3.37□□□□□ -1.87
VPS41-206ENST00000418457 NOGQ13253 232 aa3.37□□□□□ -1.87
VPS41-206ENST00000418457 R3HDM1Q15032 1099 aaKnown RBP3.37□□□□□ -1.87
VPS41-206ENST00000418457 VPS72Q15906 364 aa3.37□□□□□ -1.87
VPS41-206ENST00000418457 GFOD2Q3B7J2 385 aa3.37□□□□□ -1.87
VPS41-206ENST00000418457 DACT2Q5SW24 774 aa3.37□□□□□ -1.87
VPS41-206ENST00000418457 NAIF1Q69YI7 327 aaPredicted RBP3.37□□□□□ -1.87
VPS41-206ENST00000418457 ZNF529Q6P280 563 aa3.37□□□□□ -1.87
VPS41-206ENST00000418457 DRICH1Q6PGQ1 229 aaPredicted RBP3.37□□□□□ -1.87
VPS41-206ENST00000418457 B3GNT9Q6UX72 402 aa3.37□□□□□ -1.87
VPS41-206ENST00000418457 Q6ZRM9 215 aa3.37□□□□□ -1.87
VPS41-206ENST00000418457 HTR3DQ70Z44 454 aa3.37□□□□□ -1.87
VPS41-206ENST00000418457 DENND1CQ8IV53 801 aa3.37□□□□□ -1.87
VPS41-206ENST00000418457 DCBLD1Q8N8Z6 715 aa3.37□□□□□ -1.87
VPS41-206ENST00000418457 RNF169Q8NCN4 708 aa3.37□□□□□ -1.87
VPS41-206ENST00000418457 OR10H5Q8NGA6 315 aa3.37□□□□□ -1.87
VPS41-206ENST00000418457 TTC8Q8TAM2 541 aa3.37□□□□□ -1.87
VPS41-206ENST00000418457 TAAR9Q96RI9 348 aa3.37□□□□□ -1.87
VPS41-206ENST00000418457 DMRTA2Q96SC8 542 aa3.37□□□□□ -1.87
VPS41-206ENST00000418457 ACO2Q99798 780 aaKnown RBP3.37□□□□□ -1.87
VPS41-206ENST00000418457 MYOCQ99972 504 aa3.37□□□□□ -1.87
VPS41-206ENST00000418457 SLC23A1Q9UHI7 598 aa3.37□□□□□ -1.87
VPS41-206ENST00000418457 TESMINQ9Y4I5 508 aa3.37□□□□□ -1.87
VPS41-206ENST00000418457 PCDHA3Q9Y5H8 950 aa3.37□□□□□ -1.87
VPS41-206ENST00000418457 PNPLA7Q6ZV29 1317 aa3.37□□□□□ -1.87
VPS41-206ENST00000418457 PRDM2Q13029 1718 aa3.36□□□□□ -1.87
VPS41-206ENST00000418457 ERCC6Q03468 1493 aa3.36□□□□□ -1.87
VPS41-206ENST00000418457 TCRBV7S2A1N4TA0A589 114 aa3.36□□□□□ -1.87
VPS41-206ENST00000418457 KLRG2A4D1S0 409 aaPredicted RBP3.36□□□□□ -1.87
VPS41-206ENST00000418457 LRRC14BA6NHZ5 514 aa3.36□□□□□ -1.87
VPS41-206ENST00000418457 H3BML4 177 aa3.36□□□□□ -1.87
VPS41-206ENST00000418457 CCER2I3L3R5 266 aa3.36□□□□□ -1.87
VPS41-206ENST00000418457 GRM6O15303 877 aa3.36□□□□□ -1.87
VPS41-206ENST00000418457 ALDH2P05091 517 aa3.36□□□□□ -1.87
VPS41-206ENST00000418457 CD1AP06126 327 aa3.36□□□□□ -1.87
VPS41-206ENST00000418457 MTHFD1P11586 935 aaKnown RBP3.36□□□□□ -1.87
VPS41-206ENST00000418457 ZNF20P17024 532 aa3.36□□□□□ -1.87
VPS41-206ENST00000418457 MALP21145 153 aa3.36□□□□□ -1.87
VPS41-206ENST00000418457 HK3P52790 923 aa3.36□□□□□ -1.87
VPS41-206ENST00000418457 SNAPC2Q13487 334 aa3.36□□□□□ -1.87
VPS41-206ENST00000418457 RRP1BQ14684 758 aaKnown RBP3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms