RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 IQCF3P0C7M6 154 aa18.05■□□□□ 0.48
SSBP3-205ENST00000417664 NOP2P46087 812 aaKnown RBP18.05■□□□□ 0.48
SSBP3-205ENST00000417664 HADHBP55084 474 aaKnown RBP18.05■□□□□ 0.48
SSBP3-205ENST00000417664 FCGRTP55899 365 aa18.05■□□□□ 0.48
SSBP3-205ENST00000417664 CCL14Q16627 93 aa18.05■□□□□ 0.48
SSBP3-205ENST00000417664 MEI1Q5TIA1 1274 aa18.05■□□□□ 0.48
SSBP3-205ENST00000417664 ZNF572Q7Z3I7 529 aaPredicted RBP18.05■□□□□ 0.48
SSBP3-205ENST00000417664 APBB1IPQ7Z5R6 666 aaPredicted RBP18.05■□□□□ 0.48
SSBP3-205ENST00000417664 OR5B17Q8NGF7 314 aa18.05■□□□□ 0.48
SSBP3-205ENST00000417664 NLRP7Q8WX94 980 aa18.05■□□□□ 0.48
SSBP3-205ENST00000417664 ZBTB10Q96DT7 871 aa18.05■□□□□ 0.48
SSBP3-205ENST00000417664 FAXDC2Q96IV6 333 aa18.05■□□□□ 0.48
SSBP3-205ENST00000417664 OSBPL9Q96SU4 736 aa18.05■□□□□ 0.48
SSBP3-205ENST00000417664 PI4K2AQ9BTU6 479 aa18.05■□□□□ 0.48
SSBP3-205ENST00000417664 TLR10Q9BXR5 811 aa18.05■□□□□ 0.48
SSBP3-205ENST00000417664 RPF1Q9H9Y2 349 aaKnown RBP18.05■□□□□ 0.48
SSBP3-205ENST00000417664 ARGLU1Q9NWB6 273 aaPredicted RBP18.05■□□□□ 0.48
SSBP3-205ENST00000417664 HAS3O00219 553 aa18.04■□□□□ 0.48
SSBP3-205ENST00000417664 CES2O00748 559 aa18.04■□□□□ 0.48
SSBP3-205ENST00000417664 KPNA6O60684 536 aa18.04■□□□□ 0.48
SSBP3-205ENST00000417664 SMIM10L2AP0DMW4 78 aa18.04■□□□□ 0.48
SSBP3-205ENST00000417664 SMIM10L2BP0DMW5 78 aa18.04■□□□□ 0.48
SSBP3-205ENST00000417664 AKR1A1P14550 325 aa18.04■□□□□ 0.48
SSBP3-205ENST00000417664 NOP14P78316 857 aaKnown RBP18.04■□□□□ 0.48
SSBP3-205ENST00000417664 CUL2Q13617 745 aa18.04■□□□□ 0.48
SSBP3-205ENST00000417664 TEX35Q5T0J7 233 aa18.04■□□□□ 0.48
SSBP3-205ENST00000417664 NOP9Q86U38 636 aaKnown RBP18.04■□□□□ 0.48
SSBP3-205ENST00000417664 SLC47A2Q86VL8 602 aa18.04■□□□□ 0.48
SSBP3-205ENST00000417664 REM2Q8IYK8 340 aaPredicted RBP18.04■□□□□ 0.48
SSBP3-205ENST00000417664 THNSL1Q8IYQ7 743 aa18.04■□□□□ 0.48
SSBP3-205ENST00000417664 PDCL2Q8N4E4 241 aa18.04■□□□□ 0.48
SSBP3-205ENST00000417664 TPCN2Q8NHX9 752 aa18.04■□□□□ 0.48
SSBP3-205ENST00000417664 SLC20A1Q8WUM9 679 aa18.04■□□□□ 0.48
SSBP3-205ENST00000417664 KAT2BQ92831 832 aa18.04■□□□□ 0.48
SSBP3-205ENST00000417664 ANKRD36BP1Q96IX9 119 aa18.04■□□□□ 0.48
SSBP3-205ENST00000417664 CNTN6Q9UQ52 1028 aa18.04■□□□□ 0.48
SSBP3-205ENST00000417664 ERLIN2O94905 339 aa18.03■□□□□ 0.48
SSBP3-205ENST00000417664 ASS1P00966 412 aaKnown RBP18.03■□□□□ 0.48
SSBP3-205ENST00000417664 TNNC2P02585 160 aa18.03■□□□□ 0.48
SSBP3-205ENST00000417664 KRT5P13647 590 aa18.03■□□□□ 0.48
SSBP3-205ENST00000417664 RBM10P98175 930 aaKnown RBP18.03■□□□□ 0.48
SSBP3-205ENST00000417664 MFSD10Q14728 455 aa18.03■□□□□ 0.48
SSBP3-205ENST00000417664 SGSM1Q2NKQ1 1148 aa18.03■□□□□ 0.48
SSBP3-205ENST00000417664 SEZ6Q53EL9 994 aa18.03■□□□□ 0.48
SSBP3-205ENST00000417664 EEF1DP3Q658K8 133 aa18.03■□□□□ 0.48
SSBP3-205ENST00000417664 SLFN11Q7Z7L1 901 aa18.03■□□□□ 0.48
SSBP3-205ENST00000417664 LRRC57Q8N9N7 239 aa18.03■□□□□ 0.48
SSBP3-205ENST00000417664 ZNF668Q96K58 619 aaPredicted RBP18.03■□□□□ 0.48
SSBP3-205ENST00000417664 SCLT1Q96NL6 688 aa18.03■□□□□ 0.48
SSBP3-205ENST00000417664 ADPGKQ9BRR6 497 aa18.03■□□□□ 0.48
SSBP3-205ENST00000417664 ASB7Q9H672 318 aa18.03■□□□□ 0.48
SSBP3-205ENST00000417664 SETD4Q9NVD3 440 aa18.03■□□□□ 0.48
SSBP3-205ENST00000417664 DUSP11O75319 330 aaKnown RBP18.03■□□□□ 0.48
SSBP3-205ENST00000417664 FTLP02792 175 aaPredicted RBP18.03■□□□□ 0.48
SSBP3-205ENST00000417664 TMEM191BP0C7N4 346 aa18.03■□□□□ 0.48
SSBP3-205ENST00000417664 H2AFXP16104 143 aaPredicted RBP18.03■□□□□ 0.48
SSBP3-205ENST00000417664 CHRNB2P17787 502 aa18.03■□□□□ 0.48
SSBP3-205ENST00000417664 PSEN2P49810 448 aa18.03■□□□□ 0.48
SSBP3-205ENST00000417664 FMO1Q01740 532 aa18.03■□□□□ 0.48
SSBP3-205ENST00000417664 PPP1R2P3Q6NXS1 205 aa18.03■□□□□ 0.48
SSBP3-205ENST00000417664 CREG2Q8IUH2 290 aa18.03■□□□□ 0.48
SSBP3-205ENST00000417664 CAGE1Q8TC20 777 aa18.03■□□□□ 0.48
SSBP3-205ENST00000417664 DDX1Q92499 740 aaKnown RBP18.03■□□□□ 0.48
SSBP3-205ENST00000417664 TAF4BQ92750 862 aa18.03■□□□□ 0.48
SSBP3-205ENST00000417664 GCOM2Q9BZD3 368 aaPredicted RBP18.03■□□□□ 0.48
SSBP3-205ENST00000417664 PDZD7Q9H5P4 517 aa18.03■□□□□ 0.48
SSBP3-205ENST00000417664 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.03■□□□□ 0.487e-7■■■■■ 133.4
SSBP3-205ENST00000417664 A0A1B0GUA9 196 aa18.02■□□□□ 0.47
SSBP3-205ENST00000417664 GPR25O00155 361 aa18.02■□□□□ 0.47
SSBP3-205ENST00000417664 SRGAP2O75044 1071 aa18.02■□□□□ 0.47
SSBP3-205ENST00000417664 GNAT1P11488 350 aa18.02■□□□□ 0.47
SSBP3-205ENST00000417664 ARF4P18085 180 aaPredicted RBP18.02■□□□□ 0.47
SSBP3-205ENST00000417664 PAFAH1B1P43034 410 aa18.02■□□□□ 0.47
SSBP3-205ENST00000417664 GPC5P78333 572 aa18.02■□□□□ 0.47
SSBP3-205ENST00000417664 ADAM17P78536 824 aa18.02■□□□□ 0.47
SSBP3-205ENST00000417664 NOGQ13253 232 aa18.02■□□□□ 0.47
SSBP3-205ENST00000417664 TRPC3Q13507 836 aa18.02■□□□□ 0.47
SSBP3-205ENST00000417664 MFSD14CQ5VZR4 134 aa18.02■□□□□ 0.47
SSBP3-205ENST00000417664 SLC35G2Q8TBE7 412 aa18.02■□□□□ 0.47
SSBP3-205ENST00000417664 FAM212AQ96EL1 285 aa18.02■□□□□ 0.47
SSBP3-205ENST00000417664 MTMR12Q9C0I1 747 aa18.02■□□□□ 0.47
SSBP3-205ENST00000417664 APOBEC3GQ9HC16 384 aaKnown RBP18.02■□□□□ 0.47
SSBP3-205ENST00000417664 KIF3CO14782 793 aa18.01■□□□□ 0.47
SSBP3-205ENST00000417664 TSPAN1O60635 241 aa18.01■□□□□ 0.47
SSBP3-205ENST00000417664 STAG3L1P0CL83 205 aa18.01■□□□□ 0.47
SSBP3-205ENST00000417664 ACO1P21399 889 aaKnown RBP18.01■□□□□ 0.47
SSBP3-205ENST00000417664 RPS6KA1Q15418 735 aa18.01■□□□□ 0.47
SSBP3-205ENST00000417664 FSCN1Q16658 493 aaKnown RBP18.01■□□□□ 0.47
SSBP3-205ENST00000417664 DCAF4L1Q3SXM0 396 aa18.01■□□□□ 0.47
SSBP3-205ENST00000417664 TRIM72Q6ZMU5 477 aa18.01■□□□□ 0.47
SSBP3-205ENST00000417664 PALB2Q86YC2 1186 aa18.01■□□□□ 0.47
SSBP3-205ENST00000417664 NT5DC4Q86YG4 428 aa18.01■□□□□ 0.47
SSBP3-205ENST00000417664 CD302Q8IX05 232 aa18.01■□□□□ 0.47
SSBP3-205ENST00000417664 MSANTD4Q8NCY6 345 aa18.01■□□□□ 0.47
SSBP3-205ENST00000417664 ADAMTS10Q9H324 1103 aa18.01■□□□□ 0.47
SSBP3-205ENST00000417664 TAS2R14Q9NYV8 317 aa18.01■□□□□ 0.47
SSBP3-205ENST00000417664 MGAMO43451 1857 aa18■□□□□ 0.47
SSBP3-205ENST00000417664 TMCO5BA8MYB1 307 aa18■□□□□ 0.47
SSBP3-205ENST00000417664 FTCDO95954 541 aa18■□□□□ 0.47
SSBP3-205ENST00000417664 MMEP08473 750 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms