RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 MCOLN2Q8IZK6 566 aa15.47■□□□□ 0.07
HDAC9-208ENST00000417496 ANKRD42Q8N9B4 389 aa15.47■□□□□ 0.07
HDAC9-208ENST00000417496 FLAD1Q8NFF5 587 aa15.47■□□□□ 0.07
HDAC9-208ENST00000417496 MORC4Q8TE76 937 aa15.47■□□□□ 0.07
HDAC9-208ENST00000417496 KIFAP3Q92845 792 aa15.47■□□□□ 0.07
HDAC9-208ENST00000417496 ARHGEF2Q92974 986 aaKnown RBP15.47■□□□□ 0.07
HDAC9-208ENST00000417496 ZKSCAN4Q969J2 545 aaPredicted RBP15.47■□□□□ 0.07
HDAC9-208ENST00000417496 BICD1Q96G01 975 aa15.47■□□□□ 0.07
HDAC9-208ENST00000417496 SLC38A10Q9HBR0 1119 aa15.47■□□□□ 0.07
HDAC9-208ENST00000417496 EXOC7Q9UPT5 735 aa15.47■□□□□ 0.07
HDAC9-208ENST00000417496 WNT10BO00744 389 aa15.46■□□□□ 0.07
HDAC9-208ENST00000417496 PMM2O15305 246 aa15.46■□□□□ 0.07
HDAC9-208ENST00000417496 GH1P01241 217 aa15.46■□□□□ 0.07
HDAC9-208ENST00000417496 TNFAIP8L3Q5GJ75 292 aa15.46■□□□□ 0.07
HDAC9-208ENST00000417496 ANKS1BQ7Z6G8 1248 aa15.46■□□□□ 0.07
HDAC9-208ENST00000417496 MFSD14AQ96MC6 490 aa15.46■□□□□ 0.07
HDAC9-208ENST00000417496 SCLT1Q96NL6 688 aa15.46■□□□□ 0.07
HDAC9-208ENST00000417496 PDGFDQ9GZP0 370 aaPredicted RBP15.46■□□□□ 0.07
HDAC9-208ENST00000417496 TMEM120BA0PK00 339 aa15.46■□□□□ 0.06
HDAC9-208ENST00000417496 HGSO14964 777 aaPredicted RBP15.46■□□□□ 0.06
HDAC9-208ENST00000417496 TBC1D12O60347 775 aa15.46■□□□□ 0.06
HDAC9-208ENST00000417496 EGFRP00533 1210 aa15.46■□□□□ 0.06
HDAC9-208ENST00000417496 RALAP11233 206 aa15.46■□□□□ 0.06
HDAC9-208ENST00000417496 UNGP13051 313 aaPredicted RBP15.46■□□□□ 0.06
HDAC9-208ENST00000417496 ADCY8P40145 1251 aa15.46■□□□□ 0.06
HDAC9-208ENST00000417496 ACOT2P49753 483 aa15.46■□□□□ 0.06
HDAC9-208ENST00000417496 MPP2Q14168 576 aa15.46■□□□□ 0.06
HDAC9-208ENST00000417496 LACTB2Q53H82 288 aaPredicted RBP15.46■□□□□ 0.06
HDAC9-208ENST00000417496 SWSAP1Q6NVH7 229 aa15.46■□□□□ 0.06
HDAC9-208ENST00000417496 CYP4X1Q8N118 509 aa15.46■□□□□ 0.06
HDAC9-208ENST00000417496 C12orf50Q8NA57 414 aaPredicted RBP15.46■□□□□ 0.06
HDAC9-208ENST00000417496 GDAP1Q8TB36 358 aa15.46■□□□□ 0.06
HDAC9-208ENST00000417496 DYDC1Q8WWB3 177 aa15.46■□□□□ 0.06
HDAC9-208ENST00000417496 KCNK9Q9NPC2 374 aa15.46■□□□□ 0.06
HDAC9-208ENST00000417496 PXMP2Q9NR77 195 aa15.46■□□□□ 0.06
HDAC9-208ENST00000417496 ABCF3Q9NUQ8 709 aa15.46■□□□□ 0.06
HDAC9-208ENST00000417496 PGAP2Q9UHJ9 254 aa15.46■□□□□ 0.06
HDAC9-208ENST00000417496 BRWD3Q6RI45 1802 aa15.46■□□□□ 0.06
HDAC9-208ENST00000417496 GBP1P32455 592 aa15.45■□□□□ 0.06
HDAC9-208ENST00000417496 MTMR2Q13614 643 aa15.45■□□□□ 0.06
HDAC9-208ENST00000417496 BAATQ14032 418 aaPredicted RBP15.45■□□□□ 0.06
HDAC9-208ENST00000417496 ZNF568Q3ZCX4 644 aa15.45■□□□□ 0.06
HDAC9-208ENST00000417496 TAS1R3Q7RTX0 852 aa15.45■□□□□ 0.06
HDAC9-208ENST00000417496 CEP57Q86XR8 500 aa15.45■□□□□ 0.06
HDAC9-208ENST00000417496 PARP9Q8IXQ6 854 aa15.45■□□□□ 0.06
HDAC9-208ENST00000417496 ANKS4BQ8N8V4 417 aa15.45■□□□□ 0.06
HDAC9-208ENST00000417496 SUPT20HQ8NEM7 779 aa15.45■□□□□ 0.06
HDAC9-208ENST00000417496 KDM4CQ9H3R0 1056 aa15.45■□□□□ 0.06
HDAC9-208ENST00000417496 FGFR1OP2Q9NVK5 253 aa15.45■□□□□ 0.06
HDAC9-208ENST00000417496 KLHL11Q9NVR0 708 aa15.45■□□□□ 0.06
HDAC9-208ENST00000417496 SAMD15Q9P1V8 674 aa15.45■□□□□ 0.06
HDAC9-208ENST00000417496 PTPRJQ12913 1337 aa15.45■□□□□ 0.06
HDAC9-208ENST00000417496 MYPNQ86TC9 1320 aa15.45■□□□□ 0.06
HDAC9-208ENST00000417496 TCP11X1B4DZS4 312 aa15.45■□□□□ 0.06
HDAC9-208ENST00000417496 ASAP2O43150 1006 aa15.45■□□□□ 0.06
HDAC9-208ENST00000417496 CETPP11597 493 aa15.45■□□□□ 0.06
HDAC9-208ENST00000417496 SSR1P43307 286 aaKnown RBP15.45■□□□□ 0.06
HDAC9-208ENST00000417496 RHBDF2Q6PJF5 856 aa15.45■□□□□ 0.06
HDAC9-208ENST00000417496 FBXL18Q96ME1 805 aa15.45■□□□□ 0.06
HDAC9-208ENST00000417496 C11orf70Q9BRQ4 267 aa15.45■□□□□ 0.06
HDAC9-208ENST00000417496 TMEM109Q9BVC6 243 aa15.45■□□□□ 0.06
HDAC9-208ENST00000417496 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.45■□□□□ 0.06
HDAC9-208ENST00000417496 USTQ9Y2C2 406 aa15.45■□□□□ 0.06
HDAC9-208ENST00000417496 COL4A5P29400 1685 aa15.44■□□□□ 0.06
HDAC9-208ENST00000417496 TNNI1P19237 187 aa15.44■□□□□ 0.06
HDAC9-208ENST00000417496 DSG3P32926 999 aa15.44■□□□□ 0.06
HDAC9-208ENST00000417496 NF2P35240 595 aa15.44■□□□□ 0.06
HDAC9-208ENST00000417496 JAK3P52333 1124 aa15.44■□□□□ 0.06
HDAC9-208ENST00000417496 TAS2R40P59535 323 aa15.44■□□□□ 0.06
HDAC9-208ENST00000417496 ATP13A4Q4VNC1 1196 aa15.44■□□□□ 0.06
HDAC9-208ENST00000417496 HIBCHQ6NVY1 386 aaPredicted RBP15.44■□□□□ 0.06
HDAC9-208ENST00000417496 VSTM1Q6UX27 236 aa15.44■□□□□ 0.06
HDAC9-208ENST00000417496 GPD1LQ8N335 351 aa15.44■□□□□ 0.06
HDAC9-208ENST00000417496 DDX27Q96GQ7 796 aaKnown RBP15.44■□□□□ 0.06
HDAC9-208ENST00000417496 SGSM3Q96HU1 749 aa15.44■□□□□ 0.06
HDAC9-208ENST00000417496 RUNDC3BQ96NL0 473 aa15.44■□□□□ 0.06
HDAC9-208ENST00000417496 MOV10L1Q9BXT6 1211 aaKnown RBP15.44■□□□□ 0.06
HDAC9-208ENST00000417496 TPX2Q9ULW0 747 aaKnown RBP15.44■□□□□ 0.06
HDAC9-208ENST00000417496 PCDHA10Q9Y5I2 948 aa15.44■□□□□ 0.06
HDAC9-208ENST00000417496 TTC4O95801 387 aa15.44■□□□□ 0.06
HDAC9-208ENST00000417496 CD58P19256 250 aa15.44■□□□□ 0.06
HDAC9-208ENST00000417496 HP1BP3Q5SSJ5 553 aaPredicted RBP15.44■□□□□ 0.06
HDAC9-208ENST00000417496 TRMT10CQ7L0Y3 403 aaKnown RBP15.44■□□□□ 0.06
HDAC9-208ENST00000417496 TAOK1Q7L7X3 1001 aa15.44■□□□□ 0.06
HDAC9-208ENST00000417496 NLRX1Q86UT6 975 aa15.44■□□□□ 0.06
HDAC9-208ENST00000417496 DHX37Q8IY37 1157 aaKnown RBP15.44■□□□□ 0.06
HDAC9-208ENST00000417496 TMC2Q8TDI7 906 aa15.44■□□□□ 0.06
HDAC9-208ENST00000417496 SNF8Q96H20 258 aa15.44■□□□□ 0.06
HDAC9-208ENST00000417496 C9orf72Q96LT7 481 aa15.44■□□□□ 0.06
HDAC9-208ENST00000417496 DCLK3Q9C098 648 aa15.44■□□□□ 0.06
HDAC9-208ENST00000417496 XPNPEP1Q9NQW7 623 aa15.44■□□□□ 0.06
HDAC9-208ENST00000417496 C1orf112Q9NSG2 853 aa15.44■□□□□ 0.06
HDAC9-208ENST00000417496 ANKEF1Q9NU02 776 aa15.44■□□□□ 0.06
HDAC9-208ENST00000417496 WHRNQ9P202 907 aa15.44■□□□□ 0.06
HDAC9-208ENST00000417496 FZD1Q9UP38 647 aa15.44■□□□□ 0.06
HDAC9-208ENST00000417496 AGAP1Q9UPQ3 857 aa15.44■□□□□ 0.06
HDAC9-208ENST00000417496 CTDP1Q9Y5B0 961 aaPredicted RBP15.44■□□□□ 0.06
HDAC9-208ENST00000417496 WDR46O15213 610 aaKnown RBP15.43■□□□□ 0.06
HDAC9-208ENST00000417496 THAP12O43422 761 aa15.43■□□□□ 0.06
HDAC9-208ENST00000417496 ITIH2P19823 946 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms