RNA–Protein interactions for RNA: ENST00000417344.2

CCNT1-202, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 2,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-202ENST00000417344 PPP1R9AQ9ULJ8 1098 aa6.79□□□□□ -1.32
CCNT1-202ENST00000417344 FAM32AQ9Y421 112 aaKnown RBP6.79□□□□□ -1.32
CCNT1-202ENST00000417344 PCDHB9Q9Y5E1 797 aa6.79□□□□□ -1.32
CCNT1-202ENST00000417344 LMTK3Q96Q04 1460 aa6.79□□□□□ -1.32
CCNT1-202ENST00000417344 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.79□□□□□ -1.32
CCNT1-202ENST00000417344 F8W8V4 182 aa6.79□□□□□ -1.32
CCNT1-202ENST00000417344 EIF3FO00303 357 aaPredicted RBP6.79□□□□□ -1.32
CCNT1-202ENST00000417344 MATN2O00339 956 aa6.79□□□□□ -1.32
CCNT1-202ENST00000417344 NDC80O14777 642 aa6.79□□□□□ -1.32
CCNT1-202ENST00000417344 CBFA2T3O75081 653 aa6.79□□□□□ -1.32
CCNT1-202ENST00000417344 GSTT2P0CG29 244 aa6.79□□□□□ -1.32
CCNT1-202ENST00000417344 GSTT2BP0CG30 244 aa6.79□□□□□ -1.32
CCNT1-202ENST00000417344 ANPEPP15144 967 aa6.79□□□□□ -1.32
CCNT1-202ENST00000417344 NFKBIAP25963 317 aa6.79□□□□□ -1.32
CCNT1-202ENST00000417344 COPB2P35606 906 aa6.79□□□□□ -1.32
CCNT1-202ENST00000417344 ZAP70P43403 619 aa6.79□□□□□ -1.32
CCNT1-202ENST00000417344 RPL21P46778 160 aaKnown RBP6.79□□□□□ -1.32
CCNT1-202ENST00000417344 MED21Q13503 144 aa6.79□□□□□ -1.32
CCNT1-202ENST00000417344 HNRNPDQ14103 355 aaKnown RBP6.79□□□□□ -1.32
CCNT1-202ENST00000417344 KIF22Q14807 665 aa6.79□□□□□ -1.32
CCNT1-202ENST00000417344 ASIC2Q16515 512 aa6.79□□□□□ -1.32
CCNT1-202ENST00000417344 EXOC3L4Q17RC7 722 aa6.79□□□□□ -1.32
CCNT1-202ENST00000417344 COBLL1Q53SF7 1204 aa6.79□□□□□ -1.32
CCNT1-202ENST00000417344 HSP90AA5PQ58FG0 334 aa6.79□□□□□ -1.32
CCNT1-202ENST00000417344 CNNM4Q6P4Q7 775 aa6.79□□□□□ -1.32
CCNT1-202ENST00000417344 PIK3AP1Q6ZUJ8 805 aa6.79□□□□□ -1.32
CCNT1-202ENST00000417344 NLRP9Q7RTR0 991 aa6.79□□□□□ -1.32
CCNT1-202ENST00000417344 CLNKQ7Z7G1 428 aa6.79□□□□□ -1.32
CCNT1-202ENST00000417344 CROCCP3Q8IVE0 287 aa6.79□□□□□ -1.32
CCNT1-202ENST00000417344 PIP4K2CQ8TBX8 421 aa6.79□□□□□ -1.32
CCNT1-202ENST00000417344 LSM14BQ9BX40 385 aaKnown RBP6.79□□□□□ -1.32
CCNT1-202ENST00000417344 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.79□□□□□ -1.32
CCNT1-202ENST00000417344 ERVK-5Q9HDB9 667 aa6.79□□□□□ -1.32
CCNT1-202ENST00000417344 TCP11L1Q9NUJ3 509 aa6.79□□□□□ -1.32
CCNT1-202ENST00000417344 ZDHHC7Q9NXF8 308 aa6.79□□□□□ -1.32
CCNT1-202ENST00000417344 DNAJB4Q9UDY4 337 aa6.79□□□□□ -1.32
CCNT1-202ENST00000417344 DIS3Q9Y2L1 958 aaKnown RBP6.79□□□□□ -1.32
CCNT1-202ENST00000417344 SPATA31A3Q5VYP0 1347 aa6.79□□□□□ -1.32
CCNT1-202ENST00000417344 MYPNQ86TC9 1320 aa6.79□□□□□ -1.32
CCNT1-202ENST00000417344 ADGRA3Q8IWK6 1321 aa6.79□□□□□ -1.32
CCNT1-202ENST00000417344 LRP6O75581 1613 aa6.78□□□□□ -1.32
CCNT1-202ENST00000417344 CCDC160A6NGH7 325 aa6.78□□□□□ -1.32
CCNT1-202ENST00000417344 FOXO6A8MYZ6 492 aa6.78□□□□□ -1.32
CCNT1-202ENST00000417344 PODXLO00592 558 aa6.78□□□□□ -1.32
CCNT1-202ENST00000417344 FBP2O00757 339 aa6.78□□□□□ -1.32
CCNT1-202ENST00000417344 C2CD2LO14523 706 aa6.78□□□□□ -1.32
CCNT1-202ENST00000417344 ADCY3O60266 1144 aa6.78□□□□□ -1.32
CCNT1-202ENST00000417344 EDF1O60869 148 aaKnown RBP6.78□□□□□ -1.32
CCNT1-202ENST00000417344 PGM3O95394 542 aa6.78□□□□□ -1.32
CCNT1-202ENST00000417344 TTLL1O95922 423 aa6.78□□□□□ -1.32
CCNT1-202ENST00000417344 GAS8O95995 478 aa6.78□□□□□ -1.32
CCNT1-202ENST00000417344 LDHAP00338 332 aaKnown RBP6.78□□□□□ -1.32
CCNT1-202ENST00000417344 COL6A2P12110 1019 aa6.78□□□□□ -1.32
CCNT1-202ENST00000417344 AMPD1P23109 780 aa6.78□□□□□ -1.32
CCNT1-202ENST00000417344 UBA7P41226 1012 aa6.78□□□□□ -1.32
CCNT1-202ENST00000417344 RPL5P46777 297 aaKnown RBP6.78□□□□□ -1.32
CCNT1-202ENST00000417344 CLCN2P51788 898 aa6.78□□□□□ -1.32
CCNT1-202ENST00000417344 ASIC1P78348 528 aa6.78□□□□□ -1.32
CCNT1-202ENST00000417344 COG7P83436 770 aa6.78□□□□□ -1.32
CCNT1-202ENST00000417344 RELAQ04206 551 aa6.78□□□□□ -1.32
CCNT1-202ENST00000417344 TBL3Q12788 808 aaKnown RBP6.78□□□□□ -1.32
CCNT1-202ENST00000417344 ASPHQ12797 758 aa6.78□□□□□ -1.32
CCNT1-202ENST00000417344 NPY5RQ15761 445 aa6.78□□□□□ -1.32
CCNT1-202ENST00000417344 ZNF568Q3ZCX4 644 aa6.78□□□□□ -1.32
CCNT1-202ENST00000417344 SMUG1Q53HV7 270 aa6.78□□□□□ -1.32
CCNT1-202ENST00000417344 ZNF697Q5TEC3 545 aa6.78□□□□□ -1.32
CCNT1-202ENST00000417344 C16orf87Q6PH81 154 aa6.78□□□□□ -1.32
CCNT1-202ENST00000417344 RGS9BPQ6ZS82 235 aa6.78□□□□□ -1.32
CCNT1-202ENST00000417344 ADAT2Q7Z6V5 191 aaKnown RBP6.78□□□□□ -1.32
CCNT1-202ENST00000417344 MTDHQ86UE4 582 aaKnown RBP6.78□□□□□ -1.32
CCNT1-202ENST00000417344 PASD1Q8IV76 773 aa6.78□□□□□ -1.32
CCNT1-202ENST00000417344 SEPT12Q8IYM1 358 aa6.78□□□□□ -1.32
CCNT1-202ENST00000417344 ZNF654Q8IZM8 581 aa6.78□□□□□ -1.32
CCNT1-202ENST00000417344 SAMD3Q8N6K7 520 aa6.78□□□□□ -1.32
CCNT1-202ENST00000417344 SCAIQ8N9R8 606 aa6.78□□□□□ -1.32
CCNT1-202ENST00000417344 KIAA0895Q8NCT3 520 aa6.78□□□□□ -1.32
CCNT1-202ENST00000417344 ADAMTS19Q8TE59 1207 aa6.78□□□□□ -1.32
CCNT1-202ENST00000417344 XAGE3Q8WTP9 111 aa6.78□□□□□ -1.32
CCNT1-202ENST00000417344 PTCD3Q96EY7 689 aaKnown RBP6.78□□□□□ -1.32
CCNT1-202ENST00000417344 ZMAT2Q96NC0 199 aaKnown RBP6.78□□□□□ -1.32
CCNT1-202ENST00000417344 PLIN2Q99541 437 aa6.78□□□□□ -1.32
CCNT1-202ENST00000417344 ZKSCAN3Q9BRR0 538 aa6.78□□□□□ -1.32
CCNT1-202ENST00000417344 TRIM9Q9C026 710 aa6.78□□□□□ -1.32
CCNT1-202ENST00000417344 CDC42EP4Q9H3Q1 356 aaKnown RBP6.78□□□□□ -1.32
CCNT1-202ENST00000417344 MAGEF1Q9HAY2 307 aa6.78□□□□□ -1.32
CCNT1-202ENST00000417344 SLCO1B3Q9NPD5 702 aa6.78□□□□□ -1.32
CCNT1-202ENST00000417344 EURLQ9NYK6 297 aa6.78□□□□□ -1.32
CCNT1-202ENST00000417344 CEP126Q9P2H0 1117 aa6.78□□□□□ -1.32
CCNT1-202ENST00000417344 AMFRQ9UKV5 643 aa6.78□□□□□ -1.32
CCNT1-202ENST00000417344 TSC22D4Q9Y3Q8 395 aa6.78□□□□□ -1.32
CCNT1-202ENST00000417344 HBS1LQ9Y450 684 aaKnown RBP6.78□□□□□ -1.32
CCNT1-202ENST00000417344 TELO2Q9Y4R8 837 aa6.78□□□□□ -1.32
CCNT1-202ENST00000417344 A0A087WZG4 1122 aa6.77□□□□□ -1.32
CCNT1-202ENST00000417344 A0A0A6YYK5 440 aaPredicted RBP6.77□□□□□ -1.32
CCNT1-202ENST00000417344 hCG_1642624A0A1W2PR95 340 aa6.77□□□□□ -1.32
CCNT1-202ENST00000417344 ARHGAP10A1A4S6 786 aa6.77□□□□□ -1.32
CCNT1-202ENST00000417344 FAM47DPA6NHR8 397 aa6.77□□□□□ -1.32
CCNT1-202ENST00000417344 PP2D1A8MPX8 630 aa6.77□□□□□ -1.32
CCNT1-202ENST00000417344 EYA2O00167 538 aa6.77□□□□□ -1.32
CCNT1-202ENST00000417344 AP1G1O43747 822 aa6.77□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms