RNA–Protein interactions for RNA: ENST00000417268.3

SCAF8-203, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 2 BASIC

Gene SCAF8, Length 4,944 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-203ENST00000417268 PNKPQ96T60 521 aa13.6□□□□□ -0.23
SCAF8-203ENST00000417268 CENPKQ9BS16 269 aa13.6□□□□□ -0.23
SCAF8-203ENST00000417268 TACC3Q9Y6A5 838 aa13.6□□□□□ -0.23
SCAF8-203ENST00000417268 ZNF541Q9H0D2 1346 aa13.59□□□□□ -0.23
SCAF8-203ENST00000417268 EXOC1LA0A1B0GW35 172 aa13.59□□□□□ -0.23
SCAF8-203ENST00000417268 KLRG2A4D1S0 409 aaPredicted RBP13.59□□□□□ -0.23
SCAF8-203ENST00000417268 RPLP2P05387 115 aaKnown RBP13.59□□□□□ -0.23
SCAF8-203ENST00000417268 CALB1P05937 261 aa13.59□□□□□ -0.23
SCAF8-203ENST00000417268 FXR1P51114 621 aaKnown RBP eCLIP13.59□□□□□ -0.23
SCAF8-203ENST00000417268 ALDH5A1P51649 535 aaPredicted RBP13.59□□□□□ -0.23
SCAF8-203ENST00000417268 CYTH2Q99418 400 aa13.59□□□□□ -0.23
SCAF8-203ENST00000417268 TUBB6Q9BUF5 446 aa13.59□□□□□ -0.23
SCAF8-203ENST00000417268 ECT2Q9H8V3 914 aa13.59□□□□□ -0.23
SCAF8-203ENST00000417268 SNX12Q9UMY4 172 aa13.59□□□□□ -0.23
SCAF8-203ENST00000417268 DLG5Q8TDM6 1919 aa13.59□□□□□ -0.23
SCAF8-203ENST00000417268 ADORA2AP29274 412 aa13.59□□□□□ -0.23
SCAF8-203ENST00000417268 RANBP1P43487 201 aa13.59□□□□□ -0.23
SCAF8-203ENST00000417268 ST13P4Q8IZP2 240 aaPredicted RBP13.59□□□□□ -0.23
SCAF8-203ENST00000417268 YY1AP1Q9H869 796 aa13.59□□□□□ -0.23
SCAF8-203ENST00000417268 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.59□□□□□ -0.23
SCAF8-203ENST00000417268 A8MXQ7 604 aa13.59□□□□□ -0.23
SCAF8-203ENST00000417268 ARL13BQ3SXY8 428 aa13.59□□□□□ -0.23
SCAF8-203ENST00000417268 TRIM72Q6ZMU5 477 aa13.59□□□□□ -0.23
SCAF8-203ENST00000417268 IRAK4Q9NWZ3 460 aa13.59□□□□□ -0.23
SCAF8-203ENST00000417268 CNOT8Q9UFF9 292 aaKnown RBP13.59□□□□□ -0.23
SCAF8-203ENST00000417268 FBXL5Q9UKA1 691 aa13.59□□□□□ -0.23
SCAF8-203ENST00000417268 CSPG5O95196 566 aa13.59□□□□□ -0.23
SCAF8-203ENST00000417268 KRT14P02533 472 aa13.59□□□□□ -0.23
SCAF8-203ENST00000417268 KRT1P04264 644 aa13.59□□□□□ -0.23
SCAF8-203ENST00000417268 INHBAP08476 426 aa13.59□□□□□ -0.23
SCAF8-203ENST00000417268 SEC24CP53992 1094 aa13.59□□□□□ -0.23
SCAF8-203ENST00000417268 WDR72Q3MJ13 1102 aa13.59□□□□□ -0.23
SCAF8-203ENST00000417268 TNIP3Q96KP6 325 aa13.59□□□□□ -0.23
SCAF8-203ENST00000417268 CALN1Q9BXU9 219 aa13.59□□□□□ -0.23
SCAF8-203ENST00000417268 BATF3Q9NR55 127 aa13.59□□□□□ -0.23
SCAF8-203ENST00000417268 TRIM10Q9UDY6 481 aa13.59□□□□□ -0.23
SCAF8-203ENST00000417268 LCMT1Q9UIC8 334 aa13.59□□□□□ -0.23
SCAF8-203ENST00000417268 DIAPH2O60879 1101 aa13.58□□□□□ -0.23
SCAF8-203ENST00000417268 DCTN3O75935 186 aa13.58□□□□□ -0.23
SCAF8-203ENST00000417268 IL18RAPO95256 599 aa13.58□□□□□ -0.23
SCAF8-203ENST00000417268 GNA15P30679 374 aa13.58□□□□□ -0.23
SCAF8-203ENST00000417268 RAD23BP54727 409 aa13.58□□□□□ -0.23
SCAF8-203ENST00000417268 YWHAGP61981 247 aaKnown RBP eCLIP13.58□□□□□ -0.23
SCAF8-203ENST00000417268 TMEM132DQ14C87 1099 aa13.58□□□□□ -0.23
SCAF8-203ENST00000417268 RGMBQ6NW40 437 aa13.58□□□□□ -0.23
SCAF8-203ENST00000417268 SCN4BQ8IWT1 228 aa13.58□□□□□ -0.23
SCAF8-203ENST00000417268 AFG1LQ8WV93 481 aa13.58□□□□□ -0.23
SCAF8-203ENST00000417268 TARS2Q9BW92 718 aaKnown RBP13.58□□□□□ -0.23
SCAF8-203ENST00000417268 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.58□□□□□ -0.23
SCAF8-203ENST00000417268 PACSIN2Q9UNF0 486 aaPredicted RBP13.58□□□□□ -0.23
SCAF8-203ENST00000417268 H3BQF6 201 aa13.58□□□□□ -0.24
SCAF8-203ENST00000417268 TRPA1O75762 1119 aa13.58□□□□□ -0.24
SCAF8-203ENST00000417268 LMNAP02545 664 aaKnown RBP13.58□□□□□ -0.24
SCAF8-203ENST00000417268 NOTUMQ6P988 496 aa13.58□□□□□ -0.24
SCAF8-203ENST00000417268 CD248Q9HCU0 757 aa13.58□□□□□ -0.24
SCAF8-203ENST00000417268 NGRNQ9NPE2 291 aaKnown RBP13.58□□□□□ -0.24
SCAF8-203ENST00000417268 KBTBD4Q9NVX7 518 aa13.58□□□□□ -0.24
SCAF8-203ENST00000417268 AGAP1Q9UPQ3 857 aa13.58□□□□□ -0.24
SCAF8-203ENST00000417268 HPSEQ9Y251 543 aa13.58□□□□□ -0.24
SCAF8-203ENST00000417268 RASSF10A6NK89 507 aa13.58□□□□□ -0.24
SCAF8-203ENST00000417268 GPC5P78333 572 aa13.58□□□□□ -0.24
SCAF8-203ENST00000417268 LMBRD2Q68DH5 695 aaPredicted RBP13.58□□□□□ -0.24
SCAF8-203ENST00000417268 CALR3Q96L12 384 aaKnown RBP13.58□□□□□ -0.24
SCAF8-203ENST00000417268 RUSC1Q9BVN2 902 aa13.58□□□□□ -0.24
SCAF8-203ENST00000417268 ATP5HO75947 161 aa13.58□□□□□ -0.24
SCAF8-203ENST00000417268 ITKQ08881 620 aa13.58□□□□□ -0.24
SCAF8-203ENST00000417268 NR1I3Q14994 352 aa13.58□□□□□ -0.24
SCAF8-203ENST00000417268 GLB1LQ6UWU2 654 aa13.58□□□□□ -0.24
SCAF8-203ENST00000417268 BTNL9Q6UXG8 535 aa13.58□□□□□ -0.24
SCAF8-203ENST00000417268 AMIGO3Q86WK7 504 aa13.58□□□□□ -0.24
SCAF8-203ENST00000417268 AFAP1L2Q8N4X5 818 aa13.58□□□□□ -0.24
SCAF8-203ENST00000417268 PHRF1Q9P1Y6 1649 aaKnown RBP13.57□□□□□ -0.24
SCAF8-203ENST00000417268 H3BRB1 525 aa13.57□□□□□ -0.24
SCAF8-203ENST00000417268 TAL1P17542 331 aaPredicted RBP13.57□□□□□ -0.24
SCAF8-203ENST00000417268 FMO5P49326 533 aa13.57□□□□□ -0.24
SCAF8-203ENST00000417268 ST3GAL1Q11201 340 aa13.57□□□□□ -0.24
SCAF8-203ENST00000417268 NXNQ6DKJ4 435 aa13.57□□□□□ -0.24
SCAF8-203ENST00000417268 PDGFDQ9GZP0 370 aaPredicted RBP13.57□□□□□ -0.24
SCAF8-203ENST00000417268 TUT1Q9H6E5 874 aaKnown RBP13.57□□□□□ -0.24
SCAF8-203ENST00000417268 SLC38A7Q9NVC3 462 aa13.57□□□□□ -0.24
SCAF8-203ENST00000417268 SEPT10Q9P0V9 454 aa13.57□□□□□ -0.24
SCAF8-203ENST00000417268 CPSF3Q9UKF6 684 aaKnown RBP13.57□□□□□ -0.24
SCAF8-203ENST00000417268 TBX20Q9UMR3 447 aa13.57□□□□□ -0.24
SCAF8-203ENST00000417268 SETD1AO15047 1707 aaKnown RBP13.57□□□□□ -0.24
SCAF8-203ENST00000417268 CD4P01730 458 aa13.57□□□□□ -0.24
SCAF8-203ENST00000417268 ITGA4P13612 1032 aa13.57□□□□□ -0.24
SCAF8-203ENST00000417268 BRD2P25440 801 aaKnown RBP13.57□□□□□ -0.24
SCAF8-203ENST00000417268 NAMPTP43490 491 aa13.57□□□□□ -0.24
SCAF8-203ENST00000417268 LRRC14Q15048 493 aa13.57□□□□□ -0.24
SCAF8-203ENST00000417268 SGSM1Q2NKQ1 1148 aa13.57□□□□□ -0.24
SCAF8-203ENST00000417268 KCTD6Q8NC69 237 aa13.57□□□□□ -0.24
SCAF8-203ENST00000417268 SPECC1L-ADORA2AF8WAN1 911 aa13.57□□□□□ -0.24
SCAF8-203ENST00000417268 GYG2O15488 501 aa13.57□□□□□ -0.24
SCAF8-203ENST00000417268 TFRCP02786 760 aaKnown RBP13.57□□□□□ -0.24
SCAF8-203ENST00000417268 PSMA2P25787 234 aa13.57□□□□□ -0.24
SCAF8-203ENST00000417268 PMS2P54278 862 aa13.57□□□□□ -0.24
SCAF8-203ENST00000417268 CNTN2Q02246 1040 aa13.57□□□□□ -0.24
SCAF8-203ENST00000417268 NOGQ13253 232 aa13.57□□□□□ -0.24
SCAF8-203ENST00000417268 PIP4K2CQ8TBX8 421 aa13.57□□□□□ -0.24
SCAF8-203ENST00000417268 MORC4Q8TE76 937 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms