RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 PEX3P56589 373 aa16.28■□□□□ 0.2
RPS28-201ENST00000417088 GPC5P78333 572 aa16.28■□□□□ 0.2
RPS28-201ENST00000417088 UVSSAQ2YD98 709 aa16.28■□□□□ 0.2
RPS28-201ENST00000417088 XKR4Q5GH76 650 aa16.28■□□□□ 0.2
RPS28-201ENST00000417088 APBB1IPQ7Z5R6 666 aaPredicted RBP16.28■□□□□ 0.2
RPS28-201ENST00000417088 C3orf58Q8NDZ4 430 aa16.28■□□□□ 0.2
RPS28-201ENST00000417088 ACO2Q99798 780 aaKnown RBP16.28■□□□□ 0.2
RPS28-201ENST00000417088 CDT1Q9H211 546 aa16.28■□□□□ 0.2
RPS28-201ENST00000417088 PTPRHQ9HD43 1115 aa16.28■□□□□ 0.2
RPS28-201ENST00000417088 DLGAP2Q9P1A6 1054 aa16.28■□□□□ 0.2
RPS28-201ENST00000417088 DNMT3BQ9UBC3 853 aaKnown RBP16.28■□□□□ 0.2
RPS28-201ENST00000417088 PCDHB6Q9Y5E3 794 aa16.28■□□□□ 0.2
RPS28-201ENST00000417088 BACE2Q9Y5Z0 518 aa16.28■□□□□ 0.2
RPS28-201ENST00000417088 STK24Q9Y6E0 443 aa16.28■□□□□ 0.2
RPS28-201ENST00000417088 CDY1Q9Y6F8 540 aa16.28■□□□□ 0.2
RPS28-201ENST00000417088 EP300Q09472 2414 aaPredicted RBP16.28■□□□□ 0.2
RPS28-201ENST00000417088 PHLPP2Q6ZVD8 1323 aa16.27■□□□□ 0.2
RPS28-201ENST00000417088 CCDC169A6NNP5 214 aa16.27■□□□□ 0.2
RPS28-201ENST00000417088 PP2D1A8MPX8 630 aa16.27■□□□□ 0.2
RPS28-201ENST00000417088 I3L4J1 428 aa16.27■□□□□ 0.2
RPS28-201ENST00000417088 DCNP07585 359 aaKnown RBP16.27■□□□□ 0.2
RPS28-201ENST00000417088 BRCC3P46736 316 aa16.27■□□□□ 0.2
RPS28-201ENST00000417088 SOX4Q06945 474 aaPredicted RBP16.27■□□□□ 0.2
RPS28-201ENST00000417088 IL17AQ16552 155 aa16.27■□□□□ 0.2
RPS28-201ENST00000417088 SPECC1Q5M775 1068 aa16.27■□□□□ 0.2
RPS28-201ENST00000417088 ALKAL1Q6UXT8 129 aa16.27■□□□□ 0.2
RPS28-201ENST00000417088 TAS1R3Q7RTX0 852 aa16.27■□□□□ 0.2
RPS28-201ENST00000417088 ADSSL1Q8N142 457 aa16.27■□□□□ 0.2
RPS28-201ENST00000417088 DDX27Q96GQ7 796 aaKnown RBP16.27■□□□□ 0.2
RPS28-201ENST00000417088 KIF2CQ99661 725 aa16.27■□□□□ 0.2
RPS28-201ENST00000417088 CCDC94Q9BW85 323 aaPredicted RBP16.27■□□□□ 0.2
RPS28-201ENST00000417088 RAB34Q9BZG1 259 aa16.27■□□□□ 0.2
RPS28-201ENST00000417088 TMEM134Q9H6X4 195 aa16.27■□□□□ 0.2
RPS28-201ENST00000417088 SH2B1Q9NRF2 756 aaPredicted RBP16.27■□□□□ 0.2
RPS28-201ENST00000417088 HCFC1R1Q9NWW0 138 aa16.27■□□□□ 0.2
RPS28-201ENST00000417088 DNM3Q9UQ16 869 aa16.27■□□□□ 0.2
RPS28-201ENST00000417088 SIT1Q9Y3P8 196 aa16.27■□□□□ 0.2
RPS28-201ENST00000417088 TRIP11Q15643 1979 aa16.26■□□□□ 0.19
RPS28-201ENST00000417088 TRAPPC3O43617 180 aa16.26■□□□□ 0.19
RPS28-201ENST00000417088 HIP1RO75146 1068 aa16.26■□□□□ 0.19
RPS28-201ENST00000417088 CDC25AP30304 524 aa16.26■□□□□ 0.19
RPS28-201ENST00000417088 YARSP54577 528 aaKnown RBP16.26■□□□□ 0.19
RPS28-201ENST00000417088 STARD6P59095 220 aa16.26■□□□□ 0.19
RPS28-201ENST00000417088 OSTNP61366 133 aa16.26■□□□□ 0.19
RPS28-201ENST00000417088 MAPK7Q13164 816 aa16.26■□□□□ 0.19
RPS28-201ENST00000417088 ZNF568Q3ZCX4 644 aa16.26■□□□□ 0.19
RPS28-201ENST00000417088 ANKS3Q6ZW76 656 aa16.26■□□□□ 0.19
RPS28-201ENST00000417088 RTL10Q7L3V2 364 aa16.26■□□□□ 0.19
RPS28-201ENST00000417088 KCNK18Q7Z418 384 aa16.26■□□□□ 0.19
RPS28-201ENST00000417088 SNX27Q96L92 541 aa16.26■□□□□ 0.19
RPS28-201ENST00000417088 ZMAT2Q96NC0 199 aaKnown RBP16.26■□□□□ 0.19
RPS28-201ENST00000417088 RUSC1Q9BVN2 902 aa16.26■□□□□ 0.19
RPS28-201ENST00000417088 TARS2Q9BW92 718 aaKnown RBP16.26■□□□□ 0.19
RPS28-201ENST00000417088 MRPL4Q9BYD3 311 aaKnown RBP16.26■□□□□ 0.19
RPS28-201ENST00000417088 TOPORSQ9NS56 1045 aaPredicted RBP16.26■□□□□ 0.19
RPS28-201ENST00000417088 ARHGAP28Q9P2N2 729 aa16.26■□□□□ 0.19
RPS28-201ENST00000417088 NOTCH4Q99466 2003 aa16.25■□□□□ 0.19
RPS28-201ENST00000417088 ABLIM1O14639 778 aa16.25■□□□□ 0.19
RPS28-201ENST00000417088 DMP1Q13316 513 aaPredicted RBP16.25■□□□□ 0.19
RPS28-201ENST00000417088 PABPC1LQ4VXU2 614 aaKnown RBP16.25■□□□□ 0.19
RPS28-201ENST00000417088 KRT79Q5XKE5 535 aa16.25■□□□□ 0.19
RPS28-201ENST00000417088 SLC8B1Q6J4K2 584 aa16.25■□□□□ 0.19
RPS28-201ENST00000417088 RINT1Q6NUQ1 792 aa16.25■□□□□ 0.19
RPS28-201ENST00000417088 C1orf186Q6ZWK4 172 aa16.25■□□□□ 0.19
RPS28-201ENST00000417088 MTSS1LQ765P7 747 aa16.25■□□□□ 0.19
RPS28-201ENST00000417088 NPAS3Q8IXF0 933 aa16.25■□□□□ 0.19
RPS28-201ENST00000417088 MMTAG2Q9BU76 263 aaKnown RBP16.25■□□□□ 0.19
RPS28-201ENST00000417088 FOXQ1Q9C009 403 aa16.25■□□□□ 0.19
RPS28-201ENST00000417088 KMT5AQ9NQR1 393 aa16.25■□□□□ 0.19
RPS28-201ENST00000417088 KCNH3Q9ULD8 1083 aa16.25■□□□□ 0.19
RPS28-201ENST00000417088 RBM19Q9Y4C8 960 aaKnown RBP16.25■□□□□ 0.19
RPS28-201ENST00000417088 SFI1A8K8P3 1242 aa16.24■□□□□ 0.19
RPS28-201ENST00000417088 LAD1O00515 517 aa16.24■□□□□ 0.19
RPS28-201ENST00000417088 PODXLO00592 558 aa16.24■□□□□ 0.19
RPS28-201ENST00000417088 MEFVO15553 781 aaPredicted RBP16.24■□□□□ 0.19
RPS28-201ENST00000417088 MCF2P10911 925 aa16.24■□□□□ 0.19
RPS28-201ENST00000417088 GLULP15104 373 aa16.24■□□□□ 0.19
RPS28-201ENST00000417088 KCNE1P15382 129 aa16.24■□□□□ 0.19
RPS28-201ENST00000417088 PROZP22891 400 aa16.24■□□□□ 0.19
RPS28-201ENST00000417088 PRPHP41219 470 aa16.24■□□□□ 0.19
RPS28-201ENST00000417088 SNW1Q13573 536 aaKnown RBP16.24■□□□□ 0.19
RPS28-201ENST00000417088 PJA1Q8NG27 643 aa16.24■□□□□ 0.19
RPS28-201ENST00000417088 SHDQ96IW2 340 aa16.24■□□□□ 0.19
RPS28-201ENST00000417088 DRC1Q96MC2 740 aa16.24■□□□□ 0.19
RPS28-201ENST00000417088 ACAP3Q96P50 834 aa16.24■□□□□ 0.19
RPS28-201ENST00000417088 TCHPQ9BT92 498 aa16.24■□□□□ 0.19
RPS28-201ENST00000417088 C17orf75Q9HAS0 396 aa16.24■□□□□ 0.19
RPS28-201ENST00000417088 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.24■□□□□ 0.19
RPS28-201ENST00000417088 SLC38A7Q9NVC3 462 aa16.24■□□□□ 0.19
RPS28-201ENST00000417088 MRPS23Q9Y3D9 190 aaKnown RBP16.24■□□□□ 0.19
RPS28-201ENST00000417088 R4GN57 208 aa16.24■□□□□ 0.19
RPS28-201ENST00000417088 CACNA1IQ9P0X4 2223 aa16.23■□□□□ 0.19
RPS28-201ENST00000417088 WDR87Q6ZQQ6 2873 aa16.23■□□□□ 0.19
RPS28-201ENST00000417088 SLC16A4O15374 487 aa16.23■□□□□ 0.19
RPS28-201ENST00000417088 TBC1D4O60343 1298 aa16.23■□□□□ 0.19
RPS28-201ENST00000417088 LRRN2O75325 713 aa16.23■□□□□ 0.19
RPS28-201ENST00000417088 ABLIM3O94929 683 aa16.23■□□□□ 0.19
RPS28-201ENST00000417088 RHOP08100 348 aa16.23■□□□□ 0.19
RPS28-201ENST00000417088 ROR1Q01973 937 aa16.23■□□□□ 0.19
RPS28-201ENST00000417088 SLC44A4Q53GD3 710 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms