RNA–Protein interactions for RNA: ENST00000416918.5

TRAPPC12-205, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 473 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-205ENST00000416918 SOCS4Q8WXH5 440 aa11.85□□□□□ -0.51
TRAPPC12-205ENST00000416918 ZNF516Q92618 1163 aa11.85□□□□□ -0.51
TRAPPC12-205ENST00000416918 ANKRD36BP1Q96IX9 119 aa11.85□□□□□ -0.51
TRAPPC12-205ENST00000416918 RHOXF2Q9BQY4 288 aa11.85□□□□□ -0.51
TRAPPC12-205ENST00000416918 DNAI2Q9GZS0 605 aa11.85□□□□□ -0.51
TRAPPC12-205ENST00000416918 KATNBL1Q9H079 304 aa11.85□□□□□ -0.51
TRAPPC12-205ENST00000416918 SLITRK6Q9H5Y7 841 aa11.85□□□□□ -0.51
TRAPPC12-205ENST00000416918 TUT1Q9H6E5 874 aaKnown RBP11.85□□□□□ -0.51
TRAPPC12-205ENST00000416918 RPF1Q9H9Y2 349 aaKnown RBP11.85□□□□□ -0.51
TRAPPC12-205ENST00000416918 PDE11AQ9HCR9 933 aa11.85□□□□□ -0.51
TRAPPC12-205ENST00000416918 MRPL47Q9HD33 250 aaKnown RBP11.85□□□□□ -0.51
TRAPPC12-205ENST00000416918 CTTNBP2NLQ9P2B4 639 aa11.85□□□□□ -0.51
TRAPPC12-205ENST00000416918 ANKFY1Q9P2R3 1169 aa11.85□□□□□ -0.51
TRAPPC12-205ENST00000416918 TELO2Q9Y4R8 837 aa11.85□□□□□ -0.51
TRAPPC12-205ENST00000416918 CCDC66A2RUB6 948 aa11.84□□□□□ -0.51
TRAPPC12-205ENST00000416918 TMCO5BA8MYB1 307 aa11.84□□□□□ -0.51
TRAPPC12-205ENST00000416918 INO80B-WBP1J3KQ70 363 aa11.84□□□□□ -0.51
TRAPPC12-205ENST00000416918 MAP2K7O14733 419 aa11.84□□□□□ -0.51
TRAPPC12-205ENST00000416918 SGPL1O95470 568 aa11.84□□□□□ -0.51
TRAPPC12-205ENST00000416918 SNAI1O95863 264 aaPredicted RBP11.84□□□□□ -0.51
TRAPPC12-205ENST00000416918 FTCDO95954 541 aa11.84□□□□□ -0.51
TRAPPC12-205ENST00000416918 ASS1P00966 412 aaKnown RBP11.84□□□□□ -0.51
TRAPPC12-205ENST00000416918 KRT5P13647 590 aa11.84□□□□□ -0.51
TRAPPC12-205ENST00000416918 MARK3P27448 753 aa11.84□□□□□ -0.51
TRAPPC12-205ENST00000416918 GBP1P32455 592 aa11.84□□□□□ -0.51
TRAPPC12-205ENST00000416918 TAP1Q03518 808 aa11.84□□□□□ -0.51
TRAPPC12-205ENST00000416918 MAP2K5Q13163 448 aa11.84□□□□□ -0.51
TRAPPC12-205ENST00000416918 TMEM132AQ24JP5 1023 aa11.84□□□□□ -0.51
TRAPPC12-205ENST00000416918 CLEC16AQ2KHT3 1053 aa11.84□□□□□ -0.51
TRAPPC12-205ENST00000416918 TDRD10Q5VZ19 366 aaKnown RBP11.84□□□□□ -0.51
TRAPPC12-205ENST00000416918 CHADLQ6NUI6 762 aa11.84□□□□□ -0.51
TRAPPC12-205ENST00000416918 C8orf74Q6P047 294 aa11.84□□□□□ -0.51
TRAPPC12-205ENST00000416918 EMBQ6PCB8 327 aa11.84□□□□□ -0.51
TRAPPC12-205ENST00000416918 NOP9Q86U38 636 aaKnown RBP11.84□□□□□ -0.51
TRAPPC12-205ENST00000416918 EFCAB13Q8IY85 973 aa11.84□□□□□ -0.51
TRAPPC12-205ENST00000416918 GOLGA6L1Q8N7Z2 621 aa11.84□□□□□ -0.51
TRAPPC12-205ENST00000416918 OLIG1Q8TAK6 271 aa11.84□□□□□ -0.51
TRAPPC12-205ENST00000416918 AFG1LQ8WV93 481 aa11.84□□□□□ -0.51
TRAPPC12-205ENST00000416918 CCDC102AQ96A19 550 aa11.84□□□□□ -0.51
TRAPPC12-205ENST00000416918 POP1Q99575 1024 aaKnown RBP11.84□□□□□ -0.51
TRAPPC12-205ENST00000416918 ADPGKQ9BRR6 497 aa11.84□□□□□ -0.51
TRAPPC12-205ENST00000416918 C16orf70Q9BSU1 422 aa11.84□□□□□ -0.51
TRAPPC12-205ENST00000416918 FUT8Q9BYC5 575 aa11.84□□□□□ -0.51
TRAPPC12-205ENST00000416918 RRAGCQ9HB90 399 aa11.84□□□□□ -0.51
TRAPPC12-205ENST00000416918 PDGFCQ9NRA1 345 aa11.84□□□□□ -0.51
TRAPPC12-205ENST00000416918 STIM2Q9P246 746 aa11.84□□□□□ -0.51
TRAPPC12-205ENST00000416918 TMEM59LQ9UK28 342 aa11.84□□□□□ -0.51
TRAPPC12-205ENST00000416918 DERAQ9Y315 318 aa11.84□□□□□ -0.51
TRAPPC12-205ENST00000416918 NRCAMQ92823 1304 aa11.84□□□□□ -0.51
TRAPPC12-205ENST00000416918 LRRC37A2A6NM11 1700 aa11.83□□□□□ -0.52
TRAPPC12-205ENST00000416918 A6NJR5 290 aa11.83□□□□□ -0.52
TRAPPC12-205ENST00000416918 PDE2AO00408 941 aaPredicted RBP11.83□□□□□ -0.52
TRAPPC12-205ENST00000416918 ABLIM1O14639 778 aa11.83□□□□□ -0.52
TRAPPC12-205ENST00000416918 ZNF185O15231 689 aa11.83□□□□□ -0.52
TRAPPC12-205ENST00000416918 FAM189A1O60320 539 aa11.83□□□□□ -0.52
TRAPPC12-205ENST00000416918 BUB1BO60566 1050 aaPredicted RBP11.83□□□□□ -0.52
TRAPPC12-205ENST00000416918 PEX10O60683 326 aa11.83□□□□□ -0.52
TRAPPC12-205ENST00000416918 STAU1O95793 577 aaKnown RBP11.83□□□□□ -0.52
TRAPPC12-205ENST00000416918 TMEM191BP0C7N4 346 aa11.83□□□□□ -0.52
TRAPPC12-205ENST00000416918 GNAT1P11488 350 aa11.83□□□□□ -0.52
TRAPPC12-205ENST00000416918 CHRNB2P17787 502 aa11.83□□□□□ -0.52
TRAPPC12-205ENST00000416918 AXLP30530 894 aa11.83□□□□□ -0.52
TRAPPC12-205ENST00000416918 NSFP46459 744 aaKnown RBP11.83□□□□□ -0.52
TRAPPC12-205ENST00000416918 HUNKP57058 714 aa11.83□□□□□ -0.52
TRAPPC12-205ENST00000416918 NOP14P78316 857 aaKnown RBP11.83□□□□□ -0.52
TRAPPC12-205ENST00000416918 FMO1Q01740 532 aa11.83□□□□□ -0.52
TRAPPC12-205ENST00000416918 MBTD1Q05BQ5 628 aa11.83□□□□□ -0.52
TRAPPC12-205ENST00000416918 GABPB1Q06547 395 aaPredicted RBP11.83□□□□□ -0.52
TRAPPC12-205ENST00000416918 SREBF2Q12772 1141 aa11.83□□□□□ -0.52
TRAPPC12-205ENST00000416918 PPFIA1Q13136 1202 aa11.83□□□□□ -0.52
TRAPPC12-205ENST00000416918 CUL1Q13616 776 aa11.83□□□□□ -0.52
TRAPPC12-205ENST00000416918 DCAF4L1Q3SXM0 396 aa11.83□□□□□ -0.52
TRAPPC12-205ENST00000416918 ZNF568Q3ZCX4 644 aa11.83□□□□□ -0.52
TRAPPC12-205ENST00000416918 MORN1Q5T089 497 aa11.83□□□□□ -0.52
TRAPPC12-205ENST00000416918 MTHFD1LQ6UB35 978 aa11.83□□□□□ -0.52
TRAPPC12-205ENST00000416918 ZSWIM2Q8NEG5 633 aa11.83□□□□□ -0.52
TRAPPC12-205ENST00000416918 OR6J1Q8NGC5 347 aa11.83□□□□□ -0.52
TRAPPC12-205ENST00000416918 DDX1Q92499 740 aaKnown RBP11.83□□□□□ -0.52
TRAPPC12-205ENST00000416918 TATDN2Q93075 761 aa11.83□□□□□ -0.52
TRAPPC12-205ENST00000416918 KATNAL1Q9BW62 490 aa11.83□□□□□ -0.52
TRAPPC12-205ENST00000416918 NIF3L1Q9GZT8 377 aa11.83□□□□□ -0.52
TRAPPC12-205ENST00000416918 THAP2Q9H0W7 228 aa11.83□□□□□ -0.52
TRAPPC12-205ENST00000416918 VRTNQ9H8Y1 702 aa11.83□□□□□ -0.52
TRAPPC12-205ENST00000416918 PLEKHA5Q9HAU0 1116 aa11.83□□□□□ -0.52
TRAPPC12-205ENST00000416918 CYP3A43Q9HB55 503 aa11.83□□□□□ -0.52
TRAPPC12-205ENST00000416918 MED4Q9NPJ6 270 aa11.83□□□□□ -0.52
TRAPPC12-205ENST00000416918 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.83□□□□□ -0.524e-7■■■■□ 24.4
TRAPPC12-205ENST00000416918 ZNF446Q9NWS9 450 aa11.83□□□□□ -0.52
TRAPPC12-205ENST00000416918 KIAA1257Q9ULG3 409 aa11.83□□□□□ -0.52
TRAPPC12-205ENST00000416918 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.83□□□□□ -0.52
TRAPPC12-205ENST00000416918 CEP83Q9Y592 693 aa11.83□□□□□ -0.52
TRAPPC12-205ENST00000416918 SCINQ9Y6U3 715 aa11.83□□□□□ -0.52
TRAPPC12-205ENST00000416918 ZNF236Q9UL36 1845 aa11.82□□□□□ -0.52
TRAPPC12-205ENST00000416918 SMIM35A0A1B0GVV1 85 aa11.82□□□□□ -0.52
TRAPPC12-205ENST00000416918 MED7O43513 233 aa11.82□□□□□ -0.52
TRAPPC12-205ENST00000416918 CEP104O60308 925 aa11.82□□□□□ -0.52
TRAPPC12-205ENST00000416918 VNN1O95497 513 aa11.82□□□□□ -0.52
TRAPPC12-205ENST00000416918 TBC1D8O95759 1140 aa11.82□□□□□ -0.52
TRAPPC12-205ENST00000416918 CYP1A1P04798 512 aaPredicted RBP11.82□□□□□ -0.52
TRAPPC12-205ENST00000416918 MMP3P08254 477 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms