RNA–Protein interactions for RNA: ENST00000416295.1

SEMA3B-201, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,088 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-201ENST00000416295 CCDC47Q96A33 483 aaKnown RBP19.61■□□□□ 0.73
SEMA3B-201ENST00000416295 DDX27Q96GQ7 796 aaKnown RBP19.61■□□□□ 0.73
SEMA3B-201ENST00000416295 ZMAT2Q96NC0 199 aaKnown RBP19.61■□□□□ 0.73
SEMA3B-201ENST00000416295 PAAF1Q9BRP4 392 aa19.61■□□□□ 0.73
SEMA3B-201ENST00000416295 HERC2P3Q9BVR0 1158 aa19.61■□□□□ 0.73
SEMA3B-201ENST00000416295 IGFLR1Q9H665 355 aa19.61■□□□□ 0.73
SEMA3B-201ENST00000416295 CLDND1Q9NY35 253 aa19.61■□□□□ 0.73
SEMA3B-201ENST00000416295 CACNG4Q9UBN1 327 aa19.61■□□□□ 0.73
SEMA3B-201ENST00000416295 CPSF3Q9UKF6 684 aaKnown RBP19.61■□□□□ 0.73
SEMA3B-201ENST00000416295 SSX2IPQ9Y2D8 614 aa19.61■□□□□ 0.73
SEMA3B-201ENST00000416295 ATG2AQ2TAZ0 1938 aa19.61■□□□□ 0.73
SEMA3B-201ENST00000416295 BDP1A6H8Y1 2624 aa19.6■□□□□ 0.73
SEMA3B-201ENST00000416295 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.6■□□□□ 0.73
SEMA3B-201ENST00000416295 C2orf71A6NGG8 1288 aa19.6■□□□□ 0.73
SEMA3B-201ENST00000416295 HIDE1A8MVS5 230 aa19.6■□□□□ 0.73
SEMA3B-201ENST00000416295 F8W810 466 aa19.6■□□□□ 0.73
SEMA3B-201ENST00000416295 MEFVO15553 781 aaPredicted RBP19.6■□□□□ 0.73
SEMA3B-201ENST00000416295 EFEMP2O95967 443 aa19.6■□□□□ 0.73
SEMA3B-201ENST00000416295 LDHAP00338 332 aaKnown RBP19.6■□□□□ 0.73
SEMA3B-201ENST00000416295 GARTP22102 1010 aa19.6■□□□□ 0.73
SEMA3B-201ENST00000416295 ADSSP30520 456 aa19.6■□□□□ 0.73
SEMA3B-201ENST00000416295 ELAVL2Q12926 359 aaKnown RBP19.6■□□□□ 0.73
SEMA3B-201ENST00000416295 PSMD2Q13200 908 aa19.6■□□□□ 0.73
SEMA3B-201ENST00000416295 DUSP6Q16828 381 aa19.6■□□□□ 0.73
SEMA3B-201ENST00000416295 CTC1Q2NKJ3 1217 aa19.6■□□□□ 0.73
SEMA3B-201ENST00000416295 ZBTB41Q5SVQ8 909 aa19.6■□□□□ 0.73
SEMA3B-201ENST00000416295 DCLRE1AQ6PJP8 1040 aa19.6■□□□□ 0.73
SEMA3B-201ENST00000416295 RNF168Q8IYW5 571 aaPredicted RBP19.6■□□□□ 0.73
SEMA3B-201ENST00000416295 TMEM87AQ8NBN3 555 aa19.6■□□□□ 0.73
SEMA3B-201ENST00000416295 GLIS3Q8NEA6 775 aa19.6■□□□□ 0.73
SEMA3B-201ENST00000416295 ZNF507Q8TCN5 953 aa19.6■□□□□ 0.73
SEMA3B-201ENST00000416295 RABGGTAQ92696 567 aa19.6■□□□□ 0.73
SEMA3B-201ENST00000416295 IKZF4Q9H2S9 585 aa19.6■□□□□ 0.73
SEMA3B-201ENST00000416295 MRPL17Q9NRX2 175 aaKnown RBP19.6■□□□□ 0.73
SEMA3B-201ENST00000416295 TMEM189-UBE2V1I3L0A0 370 aa19.59■□□□□ 0.73
SEMA3B-201ENST00000416295 KIAA0391O15091 583 aaKnown RBP19.59■□□□□ 0.73
SEMA3B-201ENST00000416295 XPOTO43592 962 aaKnown RBP19.59■□□□□ 0.73
SEMA3B-201ENST00000416295 KLRC4O43908 158 aa19.59■□□□□ 0.73
SEMA3B-201ENST00000416295 KIF4AO95239 1232 aa19.59■□□□□ 0.73
SEMA3B-201ENST00000416295 ADRB2P07550 413 aa19.59■□□□□ 0.73
SEMA3B-201ENST00000416295 KCNA5P22460 613 aa19.59■□□□□ 0.73
SEMA3B-201ENST00000416295 RPL9P32969 192 aaKnown RBP19.59■□□□□ 0.73
SEMA3B-201ENST00000416295 GTF2F1P35269 517 aaKnown RBP eCLIP19.59■□□□□ 0.73
SEMA3B-201ENST00000416295 ACOT2P49753 483 aa19.59■□□□□ 0.73
SEMA3B-201ENST00000416295 FAM160A1Q05DH4 1040 aa19.59■□□□□ 0.73
SEMA3B-201ENST00000416295 PTPN14Q15678 1187 aa19.59■□□□□ 0.73
SEMA3B-201ENST00000416295 UPP1Q16831 310 aa19.59■□□□□ 0.73
SEMA3B-201ENST00000416295 KMT5BQ4FZB7 885 aa19.59■□□□□ 0.73
SEMA3B-201ENST00000416295 KIAA1841Q6NSI8 718 aa19.59■□□□□ 0.73
SEMA3B-201ENST00000416295 ARMCX5Q6P1M9 558 aa19.59■□□□□ 0.73
SEMA3B-201ENST00000416295 EP400NLQ6ZTU2 488 aa19.59■□□□□ 0.73
SEMA3B-201ENST00000416295 FMR1NBQ8N0W7 255 aaPredicted RBP19.59■□□□□ 0.73
SEMA3B-201ENST00000416295 SLC39A2Q9NP94 309 aa19.59■□□□□ 0.73
SEMA3B-201ENST00000416295 TCF20Q9UGU0 1960 aaKnown RBP19.58■□□□□ 0.73
SEMA3B-201ENST00000416295 LACTBL1A8MY62 500 aa19.58■□□□□ 0.72
SEMA3B-201ENST00000416295 PER2O15055 1255 aa19.58■□□□□ 0.72
SEMA3B-201ENST00000416295 B3GAT3O94766 335 aa19.58■□□□□ 0.72
SEMA3B-201ENST00000416295 RPN1P04843 607 aaKnown RBP19.58■□□□□ 0.72
SEMA3B-201ENST00000416295 SRGAP2BP0DMP2 458 aa19.58■□□□□ 0.72
SEMA3B-201ENST00000416295 GLUD2P49448 558 aa19.58■□□□□ 0.72
SEMA3B-201ENST00000416295 CLCNKBP51801 687 aa19.58■□□□□ 0.72
SEMA3B-201ENST00000416295 SNRPFP62306 86 aaKnown RBP19.58■□□□□ 0.72
SEMA3B-201ENST00000416295 SOX4Q06945 474 aaPredicted RBP19.58■□□□□ 0.72
SEMA3B-201ENST00000416295 ADAM15Q13444 863 aa19.58■□□□□ 0.72
SEMA3B-201ENST00000416295 BMT2Q1RMZ1 405 aa19.58■□□□□ 0.72
SEMA3B-201ENST00000416295 USP41Q3LFD5 358 aa19.58■□□□□ 0.72
SEMA3B-201ENST00000416295 GPR65Q8IYL9 337 aa19.58■□□□□ 0.72
SEMA3B-201ENST00000416295 HASPINQ8TF76 798 aa19.58■□□□□ 0.72
SEMA3B-201ENST00000416295 SCFD1Q8WVM8 642 aa19.58■□□□□ 0.72
SEMA3B-201ENST00000416295 AUTS2Q8WXX7 1259 aa19.58■□□□□ 0.72
SEMA3B-201ENST00000416295 FAM212AQ96EL1 285 aa19.58■□□□□ 0.72
SEMA3B-201ENST00000416295 KIF12Q96FN5 646 aa19.58■□□□□ 0.72
SEMA3B-201ENST00000416295 EMILIN2Q9BXX0 1053 aa19.58■□□□□ 0.72
SEMA3B-201ENST00000416295 ASB7Q9H672 318 aa19.58■□□□□ 0.72
SEMA3B-201ENST00000416295 GOLGA2P5Q9HBQ8 144 aa19.58■□□□□ 0.72
SEMA3B-201ENST00000416295 UBQLN1Q9UMX0 589 aaKnown RBP19.58■□□□□ 0.72
SEMA3B-201ENST00000416295 PODXLO00592 558 aa19.57■□□□□ 0.72
SEMA3B-201ENST00000416295 TRAPPC3O43617 180 aa19.57■□□□□ 0.72
SEMA3B-201ENST00000416295 CYP3A5P20815 502 aa19.57■□□□□ 0.72
SEMA3B-201ENST00000416295 HOXD13P35453 343 aa19.57■□□□□ 0.72
SEMA3B-201ENST00000416295 NDUFV1P49821 464 aa19.57■□□□□ 0.72
SEMA3B-201ENST00000416295 DSG1Q02413 1049 aa19.57■□□□□ 0.72
SEMA3B-201ENST00000416295 DPYDQ12882 1025 aa19.57■□□□□ 0.72
SEMA3B-201ENST00000416295 SNW1Q13573 536 aaKnown RBP19.57■□□□□ 0.72
SEMA3B-201ENST00000416295 HS2ST1Q7LGA3 356 aa19.57■□□□□ 0.72
SEMA3B-201ENST00000416295 ENGASEQ8NFI3 743 aa19.57■□□□□ 0.72
SEMA3B-201ENST00000416295 C18orf25Q96B23 403 aaPredicted RBP19.57■□□□□ 0.72
SEMA3B-201ENST00000416295 CBWD1Q9BRT8 395 aa19.57■□□□□ 0.72
SEMA3B-201ENST00000416295 FAM213AQ9BRX8 229 aa19.57■□□□□ 0.72
SEMA3B-201ENST00000416295 GPR62Q9BZJ7 368 aa19.57■□□□□ 0.72
SEMA3B-201ENST00000416295 CHST7Q9NS84 486 aa19.57■□□□□ 0.72
SEMA3B-201ENST00000416295 CGNQ9P2M7 1197 aaKnown RBP19.57■□□□□ 0.72
SEMA3B-201ENST00000416295 HOOK1Q9UJC3 728 aaKnown RBP19.57■□□□□ 0.72
SEMA3B-201ENST00000416295 DERAQ9Y315 318 aa19.57■□□□□ 0.72
SEMA3B-201ENST00000416295 CITO14578 2027 aa19.57■□□□□ 0.72
SEMA3B-201ENST00000416295 MYO7AQ13402 2215 aa19.56■□□□□ 0.72
SEMA3B-201ENST00000416295 LINC01565O15544 149 aa19.56■□□□□ 0.72
SEMA3B-201ENST00000416295 EXTL3O43909 919 aa19.56■□□□□ 0.72
SEMA3B-201ENST00000416295 TBX10O75333 385 aa19.56■□□□□ 0.72
SEMA3B-201ENST00000416295 IL18RAPO95256 599 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms