RNA–Protein interactions for RNA: ENST00000416004.1

CHRNA1-206, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2

Gene CHRNA1, Length 1,879 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-206ENST00000416004 FAM50BQ9Y247 325 aa10.02□□□□□ -0.8
CHRNA1-206ENST00000416004 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.02□□□□□ -0.8
CHRNA1-206ENST00000416004 MYH11P35749 1972 aa10.02□□□□□ -0.81
CHRNA1-206ENST00000416004 SLC16A3O15427 465 aaKnown RBP10.02□□□□□ -0.81
CHRNA1-206ENST00000416004 LPXNO60711 386 aa10.02□□□□□ -0.81
CHRNA1-206ENST00000416004 PPM1AP35813 382 aa10.02□□□□□ -0.81
CHRNA1-206ENST00000416004 KRT17Q04695 432 aa10.02□□□□□ -0.81
CHRNA1-206ENST00000416004 TMEM132AQ24JP5 1023 aa10.02□□□□□ -0.81
CHRNA1-206ENST00000416004 CDCA2Q69YH5 1023 aaPredicted RBP10.02□□□□□ -0.81
CHRNA1-206ENST00000416004 EP400NLQ6ZTU2 488 aa10.02□□□□□ -0.81
CHRNA1-206ENST00000416004 FRMD5Q7Z6J6 570 aa10.02□□□□□ -0.81
CHRNA1-206ENST00000416004 SLC9A9Q8IVB4 645 aa10.02□□□□□ -0.81
CHRNA1-206ENST00000416004 C12orf56Q8IXR9 622 aa10.02□□□□□ -0.81
CHRNA1-206ENST00000416004 THNSL1Q8IYQ7 743 aa10.02□□□□□ -0.81
CHRNA1-206ENST00000416004 LRRC43Q8N309 656 aa10.02□□□□□ -0.81
CHRNA1-206ENST00000416004 ASB2Q96Q27 587 aa10.02□□□□□ -0.81
CHRNA1-206ENST00000416004 CCDC113Q9H0I3 377 aa10.02□□□□□ -0.81
CHRNA1-206ENST00000416004 HSPBP1Q9NZL4 362 aa10.02□□□□□ -0.81
CHRNA1-206ENST00000416004 IMPACTQ9P2X3 320 aa10.02□□□□□ -0.81
CHRNA1-206ENST00000416004 ARMCX3Q9UH62 379 aaPredicted RBP10.02□□□□□ -0.81
CHRNA1-206ENST00000416004 KIAA1671Q9BY89 1806 aa10.01□□□□□ -0.81
CHRNA1-206ENST00000416004 A0A0U1RQF3 1178 aa10.01□□□□□ -0.81
CHRNA1-206ENST00000416004 GOLGA8IPA6NC78 632 aa10.01□□□□□ -0.81
CHRNA1-206ENST00000416004 GOLGA8JA6NMD2 632 aa10.01□□□□□ -0.81
CHRNA1-206ENST00000416004 GOLGA6L6A8MZA4 724 aa10.01□□□□□ -0.81
CHRNA1-206ENST00000416004 RNF225M0QZC1 329 aaPredicted RBP10.01□□□□□ -0.81
CHRNA1-206ENST00000416004 MGEA5O60502 916 aa10.01□□□□□ -0.81
CHRNA1-206ENST00000416004 AXLP30530 894 aa10.01□□□□□ -0.81
CHRNA1-206ENST00000416004 GABPB1Q06547 395 aaPredicted RBP10.01□□□□□ -0.81
CHRNA1-206ENST00000416004 SYCP1Q15431 976 aa10.01□□□□□ -0.81
CHRNA1-206ENST00000416004 ECHDC2Q86YB7 292 aa10.01□□□□□ -0.81
CHRNA1-206ENST00000416004 ZBTB8OSQ8IWT0 167 aa10.01□□□□□ -0.81
CHRNA1-206ENST00000416004 FAM186BQ8IYM0 893 aa10.01□□□□□ -0.81
CHRNA1-206ENST00000416004 RDH13Q8NBN7 331 aa10.01□□□□□ -0.81
CHRNA1-206ENST00000416004 URGCPQ8TCY9 931 aa10.01□□□□□ -0.81
CHRNA1-206ENST00000416004 MICAL1Q8TDZ2 1067 aa10.01□□□□□ -0.81
CHRNA1-206ENST00000416004 TMEM174Q8WUU8 243 aa10.01□□□□□ -0.81
CHRNA1-206ENST00000416004 TARS2Q9BW92 718 aaKnown RBP10.01□□□□□ -0.81
CHRNA1-206ENST00000416004 TRIM6Q9C030 488 aaPredicted RBP10.01□□□□□ -0.81
CHRNA1-206ENST00000416004 HAPLN2Q9GZV7 340 aa10.01□□□□□ -0.81
CHRNA1-206ENST00000416004 MINDY3Q9H8M7 445 aa10.01□□□□□ -0.81
CHRNA1-206ENST00000416004 EXOC7Q9UPT5 735 aa10.01□□□□□ -0.81
CHRNA1-206ENST00000416004 MRPL42Q9Y6G3 142 aaKnown RBP10.01□□□□□ -0.81
CHRNA1-206ENST00000416004 A0A1W2PQC6 194 aa10□□□□□ -0.81
CHRNA1-206ENST00000416004 H0YCG3 227 aa10□□□□□ -0.81
CHRNA1-206ENST00000416004 INO80B-WBP1J3KQ70 363 aa10□□□□□ -0.81
CHRNA1-206ENST00000416004 K7ERI5 159 aa10□□□□□ -0.81
CHRNA1-206ENST00000416004 HNRNPDLO14979 420 aaKnown RBP10□□□□□ -0.81
CHRNA1-206ENST00000416004 EXOC3O60645 756 aa10□□□□□ -0.81
CHRNA1-206ENST00000416004 GYPCP04921 128 aa10□□□□□ -0.81
CHRNA1-206ENST00000416004 ADRB2P07550 413 aa10□□□□□ -0.81
CHRNA1-206ENST00000416004 SRGAP2BP0DMP2 458 aa10□□□□□ -0.81
CHRNA1-206ENST00000416004 EPB41P11171 864 aaKnown RBP10□□□□□ -0.81
CHRNA1-206ENST00000416004 FGFR4P22455 802 aa10□□□□□ -0.81
CHRNA1-206ENST00000416004 PSMC2P35998 433 aaKnown RBP10□□□□□ -0.81
CHRNA1-206ENST00000416004 FAM193AP78312 1265 aa10□□□□□ -0.81
CHRNA1-206ENST00000416004 FAM189BP81408 668 aa10□□□□□ -0.81
CHRNA1-206ENST00000416004 UBE3AQ05086 875 aa10□□□□□ -0.81
CHRNA1-206ENST00000416004 RNASELQ05823 741 aaKnown RBP10□□□□□ -0.81
CHRNA1-206ENST00000416004 MYBPC2Q14324 1141 aa10□□□□□ -0.81
CHRNA1-206ENST00000416004 DSC3Q14574 896 aa10□□□□□ -0.81
CHRNA1-206ENST00000416004 PUS10Q3MIT2 529 aaKnown RBP10□□□□□ -0.81
CHRNA1-206ENST00000416004 GLB1LQ6UWU2 654 aa10□□□□□ -0.81
CHRNA1-206ENST00000416004 PLEKHO2Q8TD55 490 aa10□□□□□ -0.81
CHRNA1-206ENST00000416004 SLC35C1Q96A29 364 aa10□□□□□ -0.81
CHRNA1-206ENST00000416004 SAAL1Q96ER3 474 aa10□□□□□ -0.81
CHRNA1-206ENST00000416004 BICD1Q96G01 975 aa10□□□□□ -0.81
CHRNA1-206ENST00000416004 ZBTB45Q96K62 511 aaPredicted RBP10□□□□□ -0.81
CHRNA1-206ENST00000416004 FAM193BQ96PV7 902 aaPredicted RBP10□□□□□ -0.81
CHRNA1-206ENST00000416004 MKNK1Q9BUB5 465 aa10□□□□□ -0.81
CHRNA1-206ENST00000416004 TMEM134Q9H6X4 195 aa10□□□□□ -0.81
CHRNA1-206ENST00000416004 RC3H2Q9HBD1 1191 aaKnown RBP10□□□□□ -0.81
CHRNA1-206ENST00000416004 IFT122Q9HBG6 1241 aa10□□□□□ -0.81
CHRNA1-206ENST00000416004 UBN1Q9NPG3 1134 aa10□□□□□ -0.81
CHRNA1-206ENST00000416004 KCNG1Q9UIX4 513 aa10□□□□□ -0.81
CHRNA1-206ENST00000416004 SIK3Q9Y2K2 1263 aa10□□□□□ -0.81
CHRNA1-206ENST00000416004 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10□□□□□ -0.81
CHRNA1-206ENST00000416004 PRRC2BQ5JSZ5 2229 aaKnown RBP10□□□□□ -0.81
CHRNA1-206ENST00000416004 ITIH6Q6UXX5 1313 aa10□□□□□ -0.81
CHRNA1-206ENST00000416004 PHLPP2Q6ZVD8 1323 aa10□□□□□ -0.81
CHRNA1-206ENST00000416004 CSDE1O75534 798 aaKnown RBP10□□□□□ -0.81
CHRNA1-206ENST00000416004 PIGRP01833 764 aa10□□□□□ -0.81
CHRNA1-206ENST00000416004 FGFR1P11362 822 aa10□□□□□ -0.81
CHRNA1-206ENST00000416004 ALDH7A1P49419 539 aaKnown RBP10□□□□□ -0.81
CHRNA1-206ENST00000416004 LIG4P49917 911 aa10□□□□□ -0.81
CHRNA1-206ENST00000416004 PTENP60484 403 aa10□□□□□ -0.81
CHRNA1-206ENST00000416004 SNRPFP62306 86 aaKnown RBP10□□□□□ -0.81
CHRNA1-206ENST00000416004 POU5F1BQ06416 359 aa10□□□□□ -0.81
CHRNA1-206ENST00000416004 KCNMA1Q12791 1236 aa10□□□□□ -0.81
CHRNA1-206ENST00000416004 KCNH2Q12809 1159 aa10□□□□□ -0.81
CHRNA1-206ENST00000416004 STRN3Q13033 797 aa10□□□□□ -0.81
CHRNA1-206ENST00000416004 DCAF17Q5H9S7 520 aaPredicted RBP10□□□□□ -0.81
CHRNA1-206ENST00000416004 PDE12Q6L8Q7 609 aaKnown RBP10□□□□□ -0.81
CHRNA1-206ENST00000416004 NOTUMQ6P988 496 aa10□□□□□ -0.81
CHRNA1-206ENST00000416004 APBB1IPQ7Z5R6 666 aaPredicted RBP10□□□□□ -0.81
CHRNA1-206ENST00000416004 SPRED2Q7Z698 418 aa10□□□□□ -0.81
CHRNA1-206ENST00000416004 CBWD2Q8IUF1 395 aa10□□□□□ -0.81
CHRNA1-206ENST00000416004 LRRC8AQ8IWT6 810 aa10□□□□□ -0.81
CHRNA1-206ENST00000416004 TC2NQ8N9U0 490 aa10□□□□□ -0.81
CHRNA1-206ENST00000416004 XXYLT1Q8NBI6 393 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms