RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 CD300LGQ6UXG3 332 aa16.98■□□□□ 0.31
DDX56-202ENST00000415758 ATRIPQ8WXE1 791 aa16.98■□□□□ 0.31
DDX56-202ENST00000415758 BSNDQ8WZ55 320 aa16.98■□□□□ 0.31
DDX56-202ENST00000415758 PPP1R10Q96QC0 940 aaKnown RBP16.98■□□□□ 0.31
DDX56-202ENST00000415758 POLR3CQ9BUI4 534 aaPredicted RBP16.98■□□□□ 0.31
DDX56-202ENST00000415758 ZSCAN32Q9NX65 697 aa16.98■□□□□ 0.31
DDX56-202ENST00000415758 TRIP11Q15643 1979 aa16.97■□□□□ 0.31
DDX56-202ENST00000415758 NCAM2O15394 837 aa16.97■□□□□ 0.31
DDX56-202ENST00000415758 B3GAT3O94766 335 aa16.97■□□□□ 0.31
DDX56-202ENST00000415758 PRKCBP05771 671 aa16.97■□□□□ 0.31
DDX56-202ENST00000415758 CYP11B2P19099 503 aa16.97■□□□□ 0.31
DDX56-202ENST00000415758 CD72P21854 359 aa16.97■□□□□ 0.31
DDX56-202ENST00000415758 SDHBP21912 280 aa16.97■□□□□ 0.31
DDX56-202ENST00000415758 IGFBP6P24592 240 aaPredicted RBP16.97■□□□□ 0.31
DDX56-202ENST00000415758 CSTF1Q05048 431 aaKnown RBP16.97■□□□□ 0.31
DDX56-202ENST00000415758 ANKRD1Q15327 319 aa16.97■□□□□ 0.31
DDX56-202ENST00000415758 UPP1Q16831 310 aa16.97■□□□□ 0.31
DDX56-202ENST00000415758 RSPO4Q2I0M5 234 aaPredicted RBP16.97■□□□□ 0.31
DDX56-202ENST00000415758 EEF1DP3Q658K8 133 aa16.97■□□□□ 0.31
DDX56-202ENST00000415758 ANKS3Q6ZW76 656 aa16.97■□□□□ 0.31
DDX56-202ENST00000415758 UROC1Q96N76 676 aa16.97■□□□□ 0.31
DDX56-202ENST00000415758 EPC1Q9H2F5 836 aa16.97■□□□□ 0.31
DDX56-202ENST00000415758 MRPS23Q9Y3D9 190 aaKnown RBP16.97■□□□□ 0.31
DDX56-202ENST00000415758 CDY1Q9Y6F8 540 aa16.97■□□□□ 0.31
DDX56-202ENST00000415758 ARHGEF37A1IGU5 675 aa16.96■□□□□ 0.31
DDX56-202ENST00000415758 SHISA7A6NL88 538 aa16.96■□□□□ 0.31
DDX56-202ENST00000415758 TRAPPC3O43617 180 aa16.96■□□□□ 0.31
DDX56-202ENST00000415758 MED24O75448 989 aa16.96■□□□□ 0.31
DDX56-202ENST00000415758 EDN1P05305 212 aa16.96■□□□□ 0.31
DDX56-202ENST00000415758 RHOP08100 348 aa16.96■□□□□ 0.31
DDX56-202ENST00000415758 TARSP26639 723 aaKnown RBP16.96■□□□□ 0.31
DDX56-202ENST00000415758 RPA1P27694 616 aa16.96■□□□□ 0.31
DDX56-202ENST00000415758 CLCNKBP51801 687 aa16.96■□□□□ 0.31
DDX56-202ENST00000415758 SLC5A9Q2M3M2 681 aa16.96■□□□□ 0.31
DDX56-202ENST00000415758 DCAF4L1Q3SXM0 396 aa16.96■□□□□ 0.31
DDX56-202ENST00000415758 SLC8B1Q6J4K2 584 aa16.96■□□□□ 0.31
DDX56-202ENST00000415758 POTEHQ6S545 545 aa16.96■□□□□ 0.31
DDX56-202ENST00000415758 ZNF852Q6ZMS4 543 aa16.96■□□□□ 0.31
DDX56-202ENST00000415758 MAMSTRQ6ZN01 415 aa16.96■□□□□ 0.31
DDX56-202ENST00000415758 DIS3L2Q8IYB7 885 aaKnown RBP16.96■□□□□ 0.31
DDX56-202ENST00000415758 ZNF461Q8TAF7 563 aa16.96■□□□□ 0.31
DDX56-202ENST00000415758 FAM126AQ9BYI3 521 aaPredicted RBP16.96■□□□□ 0.31
DDX56-202ENST00000415758 PLA2G2FQ9BZM2 168 aa16.96■□□□□ 0.31
DDX56-202ENST00000415758 TMEM60Q9H2L4 133 aa16.96■□□□□ 0.31
DDX56-202ENST00000415758 NCDNQ9UBB6 729 aa16.96■□□□□ 0.31
DDX56-202ENST00000415758 USP20Q9Y2K6 914 aa16.96■□□□□ 0.31
DDX56-202ENST00000415758 MICAL2O94851 1124 aa16.95■□□□□ 0.3
DDX56-202ENST00000415758 ABLIM3O94929 683 aa16.95■□□□□ 0.3
DDX56-202ENST00000415758 PTPN2P17706 415 aa16.95■□□□□ 0.3
DDX56-202ENST00000415758 EFNA5P52803 228 aa16.95■□□□□ 0.3
DDX56-202ENST00000415758 ADCY1Q08828 1119 aa16.95■□□□□ 0.3
DDX56-202ENST00000415758 PPP2R5AQ15172 486 aa16.95■□□□□ 0.3
DDX56-202ENST00000415758 TMEM132AQ24JP5 1023 aa16.95■□□□□ 0.3
DDX56-202ENST00000415758 PADI6Q6TGC4 694 aa16.95■□□□□ 0.3
DDX56-202ENST00000415758 TPRG1Q6ZUI0 275 aa16.95■□□□□ 0.3
DDX56-202ENST00000415758 ZNF687Q8N1G0 1237 aa16.95■□□□□ 0.3
DDX56-202ENST00000415758 DEPTORQ8TB45 409 aa16.95■□□□□ 0.3
DDX56-202ENST00000415758 DNASE1L2Q92874 299 aa16.95■□□□□ 0.3
DDX56-202ENST00000415758 ELSPBP1Q96BH3 223 aa16.95■□□□□ 0.3
DDX56-202ENST00000415758 MCRS1Q96EZ8 462 aa16.95■□□□□ 0.3
DDX56-202ENST00000415758 DDX27Q96GQ7 796 aaKnown RBP16.95■□□□□ 0.3
DDX56-202ENST00000415758 PRMT8Q9NR22 394 aaPredicted RBP16.95■□□□□ 0.3
DDX56-202ENST00000415758 MRPS17Q9Y2R5 130 aaKnown RBP16.95■□□□□ 0.3
DDX56-202ENST00000415758 GDAQ9Y2T3 454 aa16.95■□□□□ 0.3
DDX56-202ENST00000415758 F5P12259 2224 aa16.94■□□□□ 0.3
DDX56-202ENST00000415758 TBC1D4O60343 1298 aa16.94■□□□□ 0.3
DDX56-202ENST00000415758 MUTP22033 750 aa16.94■□□□□ 0.3
DDX56-202ENST00000415758 TKTP29401 623 aaKnown RBP16.94■□□□□ 0.3
DDX56-202ENST00000415758 ANAPC15P60006 121 aa16.94■□□□□ 0.3
DDX56-202ENST00000415758 ME3Q16798 604 aa16.94■□□□□ 0.3
DDX56-202ENST00000415758 XKR4Q5GH76 650 aa16.94■□□□□ 0.3
DDX56-202ENST00000415758 TANGO2Q6ICL3 276 aa16.94■□□□□ 0.3
DDX56-202ENST00000415758 ALKAL1Q6UXT8 129 aa16.94■□□□□ 0.3
DDX56-202ENST00000415758 C3orf58Q8NDZ4 430 aa16.94■□□□□ 0.3
DDX56-202ENST00000415758 ING5Q8WYH8 240 aa16.94■□□□□ 0.3
DDX56-202ENST00000415758 SECISBP2LQ93073 1101 aaKnown RBP16.94■□□□□ 0.3
DDX56-202ENST00000415758 GTF3C6Q969F1 213 aa16.94■□□□□ 0.3
DDX56-202ENST00000415758 HEBP1Q9NRV9 189 aa16.94■□□□□ 0.3
DDX56-202ENST00000415758 SMIM28A0A1B0GU29 152 aa16.93■□□□□ 0.3
DDX56-202ENST00000415758 PRR5-ARHGAP8B1AHC4 643 aa16.93■□□□□ 0.3
DDX56-202ENST00000415758 ATF2P15336 505 aa16.93■□□□□ 0.3
DDX56-202ENST00000415758 TGM1P22735 817 aa16.93■□□□□ 0.3
DDX56-202ENST00000415758 ARHGAP8P85298 464 aa16.93■□□□□ 0.3
DDX56-202ENST00000415758 ROR1Q01973 937 aa16.93■□□□□ 0.3
DDX56-202ENST00000415758 GLRA4Q5JXX5 417 aa16.93■□□□□ 0.3
DDX56-202ENST00000415758 PRSS36Q5K4E3 855 aa16.93■□□□□ 0.3
DDX56-202ENST00000415758 NT5DC1Q5TFE4 455 aa16.93■□□□□ 0.3
DDX56-202ENST00000415758 ATF7IP2Q5U623 682 aa16.93■□□□□ 0.3
DDX56-202ENST00000415758 APBB1IPQ7Z5R6 666 aaPredicted RBP16.93■□□□□ 0.3
DDX56-202ENST00000415758 TCEAL8Q8IYN2 117 aa16.93■□□□□ 0.3
DDX56-202ENST00000415758 NECAB1Q8N987 351 aa16.93■□□□□ 0.3
DDX56-202ENST00000415758 NSUN7Q8NE18 718 aaKnown RBP16.93■□□□□ 0.3
DDX56-202ENST00000415758 TRPV5Q9NQA5 729 aa16.93■□□□□ 0.3
DDX56-202ENST00000415758 SMG5Q9UPR3 1016 aaKnown RBP16.93■□□□□ 0.3
DDX56-202ENST00000415758 TPRP12270 2363 aaKnown RBP16.93■□□□□ 0.3
DDX56-202ENST00000415758 WDR27A2RRH5 827 aa16.92■□□□□ 0.3
DDX56-202ENST00000415758 ARHGEF35A5YM69 484 aa16.92■□□□□ 0.3
DDX56-202ENST00000415758 LIG1P18858 919 aa16.92■□□□□ 0.3
DDX56-202ENST00000415758 FCARP24071 287 aa16.92■□□□□ 0.3
DDX56-202ENST00000415758 MCM7P33993 719 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms