RNA–Protein interactions for RNA: ENST00000414817.2

PCNPP4-201, Transcript of PEST containing nuclear protein pseudogene 4, humanhuman

BASIC

Gene PCNPP4, Length 517 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNPP4-201ENST00000414817 INO80Q9ULG1 1556 aaPredicted RBP6.69□□□□□ -1.34
PCNPP4-201ENST00000414817 SETBP1Q9Y6X0 1596 aa6.69□□□□□ -1.34
PCNPP4-201ENST00000414817 BLMP54132 1417 aaPredicted RBP6.68□□□□□ -1.34
PCNPP4-201ENST00000414817 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.68□□□□□ -1.34
PCNPP4-201ENST00000414817 FOXN1O15353 648 aa6.68□□□□□ -1.34
PCNPP4-201ENST00000414817 HSP90B1P14625 803 aaKnown RBP6.68□□□□□ -1.34
PCNPP4-201ENST00000414817 NR4A1P22736 598 aa6.68□□□□□ -1.34
PCNPP4-201ENST00000414817 BECN1Q14457 450 aa6.68□□□□□ -1.34
PCNPP4-201ENST00000414817 C19orf54Q5BKX5 351 aa6.68□□□□□ -1.34
PCNPP4-201ENST00000414817 LY6G5CQ5SRR4 150 aa6.68□□□□□ -1.34
PCNPP4-201ENST00000414817 NDC1Q9BTX1 674 aa6.68□□□□□ -1.34
PCNPP4-201ENST00000414817 CHMP4AQ9BY43 222 aa6.68□□□□□ -1.34
PCNPP4-201ENST00000414817 KCNH6Q9H252 994 aa6.68□□□□□ -1.34
PCNPP4-201ENST00000414817 PRDM12Q9H4Q4 367 aa6.68□□□□□ -1.34
PCNPP4-201ENST00000414817 IFT22Q9H7X7 185 aa6.68□□□□□ -1.34
PCNPP4-201ENST00000414817 APOBEC2Q9Y235 224 aaKnown RBP6.68□□□□□ -1.34
PCNPP4-201ENST00000414817 DISP3Q9P2K9 1392 aa6.68□□□□□ -1.34
PCNPP4-201ENST00000414817 E9PCH4 1651 aa6.68□□□□□ -1.34
PCNPP4-201ENST00000414817 EFCAB6Q5THR3 1501 aa6.67□□□□□ -1.34
PCNPP4-201ENST00000414817 PRR5-ARHGAP8B1AHC4 643 aa6.67□□□□□ -1.34
PCNPP4-201ENST00000414817 ZEB2O60315 1214 aa6.67□□□□□ -1.34
PCNPP4-201ENST00000414817 TMEM127O75204 238 aa6.67□□□□□ -1.34
PCNPP4-201ENST00000414817 ULK1O75385 1050 aa6.67□□□□□ -1.34
PCNPP4-201ENST00000414817 ABHD16AO95870 558 aa6.67□□□□□ -1.34
PCNPP4-201ENST00000414817 LPLP06858 475 aa6.67□□□□□ -1.34
PCNPP4-201ENST00000414817 GYS2P54840 703 aa6.67□□□□□ -1.34
PCNPP4-201ENST00000414817 SESN3P58005 492 aa6.67□□□□□ -1.34
PCNPP4-201ENST00000414817 LAIR1Q6GTX8 287 aa6.67□□□□□ -1.34
PCNPP4-201ENST00000414817 KCNV1Q6PIU1 500 aa6.67□□□□□ -1.34
PCNPP4-201ENST00000414817 RNF180Q86T96 592 aa6.67□□□□□ -1.34
PCNPP4-201ENST00000414817 PROKR1Q8TCW9 393 aa6.67□□□□□ -1.34
PCNPP4-201ENST00000414817 SNX33Q8WV41 574 aa6.67□□□□□ -1.34
PCNPP4-201ENST00000414817 CDC5LQ99459 802 aaKnown RBP6.67□□□□□ -1.34
PCNPP4-201ENST00000414817 AGAP2Q99490 1192 aa6.67□□□□□ -1.34
PCNPP4-201ENST00000414817 TTC1Q99614 292 aa6.67□□□□□ -1.34
PCNPP4-201ENST00000414817 SLC46A2Q9BY10 475 aa6.67□□□□□ -1.34
PCNPP4-201ENST00000414817 RWDD1Q9H446 243 aaPredicted RBP6.67□□□□□ -1.34
PCNPP4-201ENST00000414817 POLR3AO14802 1390 aaPredicted RBP6.67□□□□□ -1.34
PCNPP4-201ENST00000414817 ARHGAP31Q2M1Z3 1444 aa6.67□□□□□ -1.34
PCNPP4-201ENST00000414817 POGZQ7Z3K3 1410 aa6.67□□□□□ -1.34
PCNPP4-201ENST00000414817 VWDEQ8N2E2 1590 aa6.66□□□□□ -1.34
PCNPP4-201ENST00000414817 MADDQ8WXG6 1647 aa6.66□□□□□ -1.34
PCNPP4-201ENST00000414817 RNF17Q9BXT8 1623 aaKnown RBP6.66□□□□□ -1.34
PCNPP4-201ENST00000414817 MAP3K4Q9Y6R4 1608 aa6.66□□□□□ -1.34
PCNPP4-201ENST00000414817 NEMP1O14524 444 aa6.66□□□□□ -1.34
PCNPP4-201ENST00000414817 LGALS4P56470 323 aa6.66□□□□□ -1.34
PCNPP4-201ENST00000414817 APBA1Q02410 837 aa6.66□□□□□ -1.34
PCNPP4-201ENST00000414817 SLFN5Q08AF3 891 aa6.66□□□□□ -1.34
PCNPP4-201ENST00000414817 LMOD3Q0VAK6 560 aa6.66□□□□□ -1.34
PCNPP4-201ENST00000414817 PDCD1Q15116 288 aa6.66□□□□□ -1.34
PCNPP4-201ENST00000414817 PTPAQ15257 358 aa6.66□□□□□ -1.34
PCNPP4-201ENST00000414817 FSCN1Q16658 493 aaKnown RBP6.66□□□□□ -1.34
PCNPP4-201ENST00000414817 UGT8Q16880 541 aa6.66□□□□□ -1.34
PCNPP4-201ENST00000414817 CT83Q5H943 113 aa6.66□□□□□ -1.34
PCNPP4-201ENST00000414817 DDX46Q7L014 1031 aaKnown RBP6.66□□□□□ -1.34
PCNPP4-201ENST00000414817 GPRIN1Q7Z2K8 1008 aa6.66□□□□□ -1.34
PCNPP4-201ENST00000414817 XYLT1Q86Y38 959 aa6.66□□□□□ -1.34
PCNPP4-201ENST00000414817 THNSL2Q86YJ6 484 aa6.66□□□□□ -1.34
PCNPP4-201ENST00000414817 ACAP3Q96P50 834 aa6.66□□□□□ -1.34
PCNPP4-201ENST00000414817 MLST8Q9BVC4 326 aa6.66□□□□□ -1.34
PCNPP4-201ENST00000414817 TOPORSQ9NS56 1045 aaPredicted RBP6.66□□□□□ -1.34
PCNPP4-201ENST00000414817 HS3ST4Q9Y661 456 aa6.66□□□□□ -1.34
PCNPP4-201ENST00000414817 ZFYVE9O95405 1425 aa6.66□□□□□ -1.34
PCNPP4-201ENST00000414817 NKTRP30414 1462 aaKnown RBP6.66□□□□□ -1.34
PCNPP4-201ENST00000414817 HECW2Q9P2P5 1572 aa6.65□□□□□ -1.34
PCNPP4-201ENST00000414817 IQGAP1P46940 1657 aa6.65□□□□□ -1.34
PCNPP4-201ENST00000414817 B5MCH6 92 aa6.65□□□□□ -1.34
PCNPP4-201ENST00000414817 ITGA10O75578 1167 aa6.65□□□□□ -1.34
PCNPP4-201ENST00000414817 GASTP01350 101 aa6.65□□□□□ -1.34
PCNPP4-201ENST00000414817 APOBEC3AP31941 199 aaPredicted RBP6.65□□□□□ -1.34
PCNPP4-201ENST00000414817 KRTAP15-1Q3LI76 137 aa6.65□□□□□ -1.34
PCNPP4-201ENST00000414817 TIGD2Q4W5G0 525 aa6.65□□□□□ -1.34
PCNPP4-201ENST00000414817 ABHD15Q6UXT9 468 aa6.65□□□□□ -1.34
PCNPP4-201ENST00000414817 CLRN3Q8NCR9 226 aa6.65□□□□□ -1.34
PCNPP4-201ENST00000414817 DCLRE1CQ96SD1 692 aaKnown RBP6.65□□□□□ -1.34
PCNPP4-201ENST00000414817 ZC3H13Q5T200 1668 aaKnown RBP6.65□□□□□ -1.35
PCNPP4-201ENST00000414817 AHRRA9YTQ3 701 aa6.64□□□□□ -1.35
PCNPP4-201ENST00000414817 LAG3P18627 525 aa6.64□□□□□ -1.35
PCNPP4-201ENST00000414817 CTSSP25774 331 aa6.64□□□□□ -1.35
PCNPP4-201ENST00000414817 ID4P47928 161 aa6.64□□□□□ -1.35
PCNPP4-201ENST00000414817 FSTL1Q12841 308 aa6.64□□□□□ -1.35
PCNPP4-201ENST00000414817 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.64□□□□□ -1.35
PCNPP4-201ENST00000414817 DRICH1Q6PGQ1 229 aaPredicted RBP6.64□□□□□ -1.35
PCNPP4-201ENST00000414817 PDZD4Q76G19 769 aaPredicted RBP6.64□□□□□ -1.35
PCNPP4-201ENST00000414817 GDF7Q7Z4P5 450 aa6.64□□□□□ -1.35
PCNPP4-201ENST00000414817 FTSJ3Q8IY81 847 aaKnown RBP6.64□□□□□ -1.35
PCNPP4-201ENST00000414817 ZNF480Q8WV37 535 aa6.64□□□□□ -1.35
PCNPP4-201ENST00000414817 EAF2Q96CJ1 260 aaPredicted RBP6.64□□□□□ -1.35
PCNPP4-201ENST00000414817 RAX2Q96IS3 184 aa6.64□□□□□ -1.35
PCNPP4-201ENST00000414817 KRTAP17-1Q9BYP8 105 aa6.64□□□□□ -1.35
PCNPP4-201ENST00000414817 SLKQ9H2G2 1235 aaPredicted RBP6.64□□□□□ -1.35
PCNPP4-201ENST00000414817 ZNF768Q9H5H4 540 aaKnown RBP6.64□□□□□ -1.35
PCNPP4-201ENST00000414817 SPON1Q9HCB6 807 aa6.64□□□□□ -1.35
PCNPP4-201ENST00000414817 GPRC5DQ9NZD1 345 aa6.64□□□□□ -1.35
PCNPP4-201ENST00000414817 TRPM5Q9NZQ8 1165 aa6.64□□□□□ -1.35
PCNPP4-201ENST00000414817 ERCC6L2Q5T890 1561 aa6.64□□□□□ -1.35
PCNPP4-201ENST00000414817 APAF1O14727 1248 aa6.63□□□□□ -1.35
PCNPP4-201ENST00000414817 U2AF1L5P0DN76 240 aaPredicted RBP6.63□□□□□ -1.35
PCNPP4-201ENST00000414817 ENPP1P22413 925 aa6.63□□□□□ -1.35
PCNPP4-201ENST00000414817 ZFP36P26651 326 aaKnown RBP6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms