RNA–Protein interactions for RNA: ENST00000414711.5

CPNE1-208, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-208ENST00000414711 NAV2Q8IVL1 2488 aa17.56■□□□□ 0.4
CPNE1-208ENST00000414711 BPTFQ12830 3046 aa17.56■□□□□ 0.4
CPNE1-208ENST00000414711 VWA8A3KMH1 1905 aa17.55■□□□□ 0.4
CPNE1-208ENST00000414711 EIF4E1BA6NMX2 242 aaKnown RBP17.55■□□□□ 0.4
CPNE1-208ENST00000414711 ZNF197O14709 1029 aa17.55■□□□□ 0.4
CPNE1-208ENST00000414711 MICAL2O94851 1124 aa17.55■□□□□ 0.4
CPNE1-208ENST00000414711 LRG1P02750 347 aa17.55■□□□□ 0.4
CPNE1-208ENST00000414711 AXLP30530 894 aa17.55■□□□□ 0.4
CPNE1-208ENST00000414711 MCM5P33992 734 aa17.55■□□□□ 0.4
CPNE1-208ENST00000414711 IRX6P78412 446 aaPredicted RBP17.55■□□□□ 0.4
CPNE1-208ENST00000414711 CREB5Q02930 508 aa17.55■□□□□ 0.4
CPNE1-208ENST00000414711 TUSC3Q13454 348 aa17.55■□□□□ 0.4
CPNE1-208ENST00000414711 AAMPQ13685 434 aa17.55■□□□□ 0.4
CPNE1-208ENST00000414711 CCINQ13939 588 aa17.55■□□□□ 0.4
CPNE1-208ENST00000414711 COL28A1Q2UY09 1125 aa17.55■□□□□ 0.4
CPNE1-208ENST00000414711 TXNDC11Q6PKC3 985 aa17.55■□□□□ 0.4
CPNE1-208ENST00000414711 ANO5Q75V66 913 aa17.55■□□□□ 0.4
CPNE1-208ENST00000414711 PDZD4Q76G19 769 aaPredicted RBP17.55■□□□□ 0.4
CPNE1-208ENST00000414711 RNF149Q8NC42 400 aa17.55■□□□□ 0.4
CPNE1-208ENST00000414711 DEFB124Q8NES8 71 aa17.55■□□□□ 0.4
CPNE1-208ENST00000414711 EXOC6Q8TAG9 804 aa17.55■□□□□ 0.4
CPNE1-208ENST00000414711 FAM200AQ8TCP9 573 aa17.55■□□□□ 0.4
CPNE1-208ENST00000414711 SLC5A5Q92911 643 aa17.55■□□□□ 0.4
CPNE1-208ENST00000414711 TMEM143Q96AN5 459 aa17.55■□□□□ 0.4
CPNE1-208ENST00000414711 ZSWIM3Q96MP5 696 aa17.55■□□□□ 0.4
CPNE1-208ENST00000414711 BBC3Q96PG8 261 aaPredicted RBP17.55■□□□□ 0.4
CPNE1-208ENST00000414711 TMEM9BQ9NQ34 198 aa17.55■□□□□ 0.4
CPNE1-208ENST00000414711 KLK14Q9P0G3 267 aa17.55■□□□□ 0.4
CPNE1-208ENST00000414711 MTRRQ9UBK8 725 aa17.55■□□□□ 0.4
CPNE1-208ENST00000414711 CDY1Q9Y6F8 540 aa17.55■□□□□ 0.4
CPNE1-208ENST00000414711 V9GY48 417 aaPredicted RBP17.55■□□□□ 0.4
CPNE1-208ENST00000414711 SPECC1L-ADORA2AF8WAN1 911 aa17.54■□□□□ 0.4
CPNE1-208ENST00000414711 ADAMTS3O15072 1205 aa17.54■□□□□ 0.4
CPNE1-208ENST00000414711 CAVIN2O95810 425 aa17.54■□□□□ 0.4
CPNE1-208ENST00000414711 CTHP32929 405 aa17.54■□□□□ 0.4
CPNE1-208ENST00000414711 CCR2P41597 374 aa17.54■□□□□ 0.4
CPNE1-208ENST00000414711 SPIRE1Q08AE8 756 aa17.54■□□□□ 0.4
CPNE1-208ENST00000414711 FUT2Q10981 343 aa17.54■□□□□ 0.4
CPNE1-208ENST00000414711 PCBP1Q15365 356 aaKnown RBP eCLIP17.54■□□□□ 0.42e-19■□□□□ 8.2
CPNE1-208ENST00000414711 ELF2Q15723 593 aa17.54■□□□□ 0.4
CPNE1-208ENST00000414711 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.54■□□□□ 0.4
CPNE1-208ENST00000414711 MFSD6LQ8IWD5 586 aa17.54■□□□□ 0.4
CPNE1-208ENST00000414711 REXO1Q8N1G1 1221 aaKnown RBP17.54■□□□□ 0.4
CPNE1-208ENST00000414711 SYNPOQ8N3V7 929 aa17.54■□□□□ 0.4
CPNE1-208ENST00000414711 GJA10Q969M2 543 aa17.54■□□□□ 0.4
CPNE1-208ENST00000414711 RBM28Q9NW13 759 aaKnown RBP17.54■□□□□ 0.4
CPNE1-208ENST00000414711 ARHGEF37A1IGU5 675 aa17.53■□□□□ 0.4
CPNE1-208ENST00000414711 MYBPHLA2RUH7 354 aa17.53■□□□□ 0.4
CPNE1-208ENST00000414711 PON2Q15165 354 aa17.53■□□□□ 0.4
CPNE1-208ENST00000414711 RALGPS2Q86X27 583 aaPredicted RBP17.53■□□□□ 0.4
CPNE1-208ENST00000414711 YAF2Q8IY57 180 aa17.53■□□□□ 0.4
CPNE1-208ENST00000414711 ZSCAN18Q8TBC5 510 aaPredicted RBP17.53■□□□□ 0.4
CPNE1-208ENST00000414711 ADAM32Q8TC27 787 aa17.53■□□□□ 0.4
CPNE1-208ENST00000414711 TRPV4Q9HBA0 871 aa17.53■□□□□ 0.4
CPNE1-208ENST00000414711 BCLAF3A2AJT9 711 aaKnown RBP17.52■□□□□ 0.4
CPNE1-208ENST00000414711 HEPACAM2A8MVW5 462 aa17.52■□□□□ 0.4
CPNE1-208ENST00000414711 PRRG1O14668 218 aa17.52■□□□□ 0.4
CPNE1-208ENST00000414711 NPEPPSP55786 919 aa17.52■□□□□ 0.4
CPNE1-208ENST00000414711 FGD1P98174 961 aa17.52■□□□□ 0.4
CPNE1-208ENST00000414711 NCBP1Q09161 790 aaKnown RBP17.52■□□□□ 0.4
CPNE1-208ENST00000414711 B4GALNT3Q6L9W6 998 aa17.52■□□□□ 0.4
CPNE1-208ENST00000414711 PKN3Q6P5Z2 889 aa17.52■□□□□ 0.4
CPNE1-208ENST00000414711 DUSP15Q9H1R2 295 aaPredicted RBP17.52■□□□□ 0.4
CPNE1-208ENST00000414711 BMP2KQ9NSY1 1161 aaPredicted RBP17.52■□□□□ 0.4
CPNE1-208ENST00000414711 PARP2Q9UGN5 583 aa17.52■□□□□ 0.4
CPNE1-208ENST00000414711 ESYT2A0FGR8 921 aa17.51■□□□□ 0.39
CPNE1-208ENST00000414711 CHADO15335 359 aa17.51■□□□□ 0.39
CPNE1-208ENST00000414711 PSMD10O75832 226 aa17.51■□□□□ 0.39
CPNE1-208ENST00000414711 SEC24BO95487 1268 aa17.51■□□□□ 0.39
CPNE1-208ENST00000414711 CAPNS1P04632 268 aa17.51■□□□□ 0.39
CPNE1-208ENST00000414711 FGFR3P22607 806 aa17.51■□□□□ 0.39
CPNE1-208ENST00000414711 SGMS1Q86VZ5 419 aa17.51■□□□□ 0.39
CPNE1-208ENST00000414711 CCDC136Q96JN2 1154 aa17.51■□□□□ 0.39
CPNE1-208ENST00000414711 LRRC2Q9BYS8 371 aa17.51■□□□□ 0.39
CPNE1-208ENST00000414711 DHX33Q9H6R0 707 aaKnown RBP17.51■□□□□ 0.39
CPNE1-208ENST00000414711 SLC8A2Q9UPR5 921 aa17.51■□□□□ 0.39
CPNE1-208ENST00000414711 EML5Q05BV3 1969 aa17.51■□□□□ 0.39
CPNE1-208ENST00000414711 INO80B-WBP1J3KQ70 363 aa17.5■□□□□ 0.39
CPNE1-208ENST00000414711 CDX4O14627 284 aaPredicted RBP17.5■□□□□ 0.39
CPNE1-208ENST00000414711 KHNYNO15037 678 aaKnown RBP17.5■□□□□ 0.39
CPNE1-208ENST00000414711 RHOBTB1O94844 696 aa17.5■□□□□ 0.39
CPNE1-208ENST00000414711 NPTXRO95502 500 aa17.5■□□□□ 0.39
CPNE1-208ENST00000414711 PSMC5P62195 406 aa17.5■□□□□ 0.39
CPNE1-208ENST00000414711 RTN1Q16799 776 aa17.5■□□□□ 0.39
CPNE1-208ENST00000414711 UAP1L1Q3KQV9 507 aa17.5■□□□□ 0.39
CPNE1-208ENST00000414711 CYP4A22Q5TCH4 519 aa17.5■□□□□ 0.39
CPNE1-208ENST00000414711 SYNE3Q6ZMZ3 975 aa17.5■□□□□ 0.39
CPNE1-208ENST00000414711 FERMT3Q86UX7 667 aa17.5■□□□□ 0.39
CPNE1-208ENST00000414711 CHD1LQ86WJ1 897 aa17.5■□□□□ 0.39
CPNE1-208ENST00000414711 EXOC8Q8IYI6 725 aa17.5■□□□□ 0.39
CPNE1-208ENST00000414711 TTC8Q8TAM2 541 aa17.5■□□□□ 0.39
CPNE1-208ENST00000414711 RUFY2Q8WXA3 655 aa17.5■□□□□ 0.39
CPNE1-208ENST00000414711 E2F7Q96AV8 911 aa17.5■□□□□ 0.39
CPNE1-208ENST00000414711 RSPRY1Q96DX4 576 aa17.5■□□□□ 0.39
CPNE1-208ENST00000414711 MKNK1Q9BUB5 465 aa17.5■□□□□ 0.39
CPNE1-208ENST00000414711 ZMYND12Q9H0C1 365 aa17.5■□□□□ 0.39
CPNE1-208ENST00000414711 BACE2Q9Y5Z0 518 aa17.5■□□□□ 0.39
CPNE1-208ENST00000414711 CACNA1EQ15878 2313 aa17.49■□□□□ 0.39
CPNE1-208ENST00000414711 MOSPD3O75425 235 aa17.49■□□□□ 0.39
CPNE1-208ENST00000414711 ARF4P18085 180 aaPredicted RBP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms