RNA–Protein interactions for RNA: ENST00000414664.5

CPNE1-207, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,070 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-207ENST00000414664 SF3B1O75533 1304 aaKnown RBP eCLIP27.55■■■□□ 23e-7■■■■■ 90.2
CPNE1-207ENST00000414664 PRUNE2Q8WUY3 3088 aa27.54■■■□□ 2
CPNE1-207ENST00000414664 TISP43B9A030 160 aa27.54■■■□□ 2
CPNE1-207ENST00000414664 UBE4BO95155 1302 aa27.54■■■□□ 2
CPNE1-207ENST00000414664 EFEMP2O95967 443 aa27.54■■■□□ 2
CPNE1-207ENST00000414664 LDHAP00338 332 aaKnown RBP27.54■■■□□ 2
CPNE1-207ENST00000414664 SRGAP2BP0DMP2 458 aa27.54■■■□□ 2
CPNE1-207ENST00000414664 KCNA5P22460 613 aa27.54■■■□□ 2
CPNE1-207ENST00000414664 TFF2Q03403 129 aa27.54■■■□□ 2
CPNE1-207ENST00000414664 ELAVL2Q12926 359 aaKnown RBP27.54■■■□□ 2
CPNE1-207ENST00000414664 PSMD2Q13200 908 aa27.54■■■□□ 2
CPNE1-207ENST00000414664 KIAA1841Q6NSI8 718 aa27.54■■■□□ 2
CPNE1-207ENST00000414664 EPM2AIP1Q7L775 607 aaPredicted RBP27.54■■■□□ 2
CPNE1-207ENST00000414664 RNF168Q8IYW5 571 aaPredicted RBP27.54■■■□□ 2
CPNE1-207ENST00000414664 ZNF507Q8TCN5 953 aa27.54■■■□□ 2
CPNE1-207ENST00000414664 EXOC1Q9NV70 894 aa27.54■■■□□ 2
CPNE1-207ENST00000414664 CACNG4Q9UBN1 327 aa27.54■■■□□ 2
CPNE1-207ENST00000414664 F8W810 466 aa27.53■■■□□ 2
CPNE1-207ENST00000414664 TMEM189-UBE2V1I3L0A0 370 aa27.53■■■□□ 2
CPNE1-207ENST00000414664 MEFVO15553 781 aaPredicted RBP27.53■■■□□ 2
CPNE1-207ENST00000414664 XPOTO43592 962 aaKnown RBP27.53■■■□□ 2
CPNE1-207ENST00000414664 ADSSP30520 456 aa27.53■■■□□ 2
CPNE1-207ENST00000414664 RPL9P32969 192 aaKnown RBP27.53■■■□□ 2
CPNE1-207ENST00000414664 GLUD2P49448 558 aa27.53■■■□□ 2
CPNE1-207ENST00000414664 NDUFV1P49821 464 aa27.53■■■□□ 2
CPNE1-207ENST00000414664 ENOX2Q16206 610 aaKnown RBP27.53■■■□□ 2
CPNE1-207ENST00000414664 USP41Q3LFD5 358 aa27.53■■■□□ 2
CPNE1-207ENST00000414664 ZBTB41Q5SVQ8 909 aa27.53■■■□□ 2
CPNE1-207ENST00000414664 KIF12Q96FN5 646 aa27.53■■■□□ 2
CPNE1-207ENST00000414664 EMILIN2Q9BXX0 1053 aa27.53■■■□□ 2
CPNE1-207ENST00000414664 IKZF4Q9H2S9 585 aa27.53■■■□□ 2
CPNE1-207ENST00000414664 LACTBL1A8MY62 500 aa27.52■■■□□ 2
CPNE1-207ENST00000414664 KIAA0391O15091 583 aaKnown RBP27.52■■■□□ 2
CPNE1-207ENST00000414664 KLRC4O43908 158 aa27.52■■■□□ 2
CPNE1-207ENST00000414664 B3GAT3O94766 335 aa27.52■■■□□ 2
CPNE1-207ENST00000414664 KIF4AO95239 1232 aa27.52■■■□□ 2
CPNE1-207ENST00000414664 ADRB2P07550 413 aa27.52■■■□□ 2
CPNE1-207ENST00000414664 ACOT2P49753 483 aa27.52■■■□□ 2
CPNE1-207ENST00000414664 CLCNKBP51801 687 aa27.52■■■□□ 2
CPNE1-207ENST00000414664 PTPN14Q15678 1187 aa27.52■■■□□ 2
CPNE1-207ENST00000414664 UPP1Q16831 310 aa27.52■■■□□ 2
CPNE1-207ENST00000414664 LEXMQ3ZCV2 418 aa27.52■■■□□ 2
CPNE1-207ENST00000414664 TJAP1Q5JTD0 557 aa27.52■■■□□ 2
CPNE1-207ENST00000414664 TAS1R1Q7RTX1 841 aa27.52■■■□□ 2
CPNE1-207ENST00000414664 GLIS3Q8NEA6 775 aa27.52■■■□□ 2
CPNE1-207ENST00000414664 AUTS2Q8WXX7 1259 aa27.52■■■□□ 2
CPNE1-207ENST00000414664 FAM212AQ96EL1 285 aa27.52■■■□□ 2
CPNE1-207ENST00000414664 GPR62Q9BZJ7 368 aa27.52■■■□□ 2
CPNE1-207ENST00000414664 GOLGA2P5Q9HBQ8 144 aa27.52■■■□□ 2
CPNE1-207ENST00000414664 SLC39A2Q9NP94 309 aa27.52■■■□□ 2
CPNE1-207ENST00000414664 UBQLN1Q9UMX0 589 aaKnown RBP27.52■■■□□ 2
CPNE1-207ENST00000414664 REV3LO60673 3130 aa27.52■■■□□ 2
CPNE1-207ENST00000414664 LINC01565O15544 149 aa27.51■■□□□ 1.99
CPNE1-207ENST00000414664 SOX4Q06945 474 aaPredicted RBP27.51■■□□□ 1.99
CPNE1-207ENST00000414664 PUS10Q3MIT2 529 aaKnown RBP27.51■■□□□ 1.99
CPNE1-207ENST00000414664 KMT5BQ4FZB7 885 aa27.51■■□□□ 1.99
CPNE1-207ENST00000414664 ARMCX5Q6P1M9 558 aa27.51■■□□□ 1.99
CPNE1-207ENST00000414664 GPR65Q8IYL9 337 aa27.51■■□□□ 1.99
CPNE1-207ENST00000414664 HASPINQ8TF76 798 aa27.51■■□□□ 1.99
CPNE1-207ENST00000414664 ASB7Q9H672 318 aa27.51■■□□□ 1.99
CPNE1-207ENST00000414664 CHST7Q9NS84 486 aa27.51■■□□□ 1.99
CPNE1-207ENST00000414664 TRAPPC3O43617 180 aa27.5■■□□□ 1.99
CPNE1-207ENST00000414664 CLASP2O75122 1294 aaKnown RBP27.5■■□□□ 1.99
CPNE1-207ENST00000414664 RPN1P04843 607 aaKnown RBP27.5■■□□□ 1.99
CPNE1-207ENST00000414664 CYP3A5P20815 502 aa27.5■■□□□ 1.99
CPNE1-207ENST00000414664 LTBRP36941 435 aa27.5■■□□□ 1.99
CPNE1-207ENST00000414664 SNRPFP62306 86 aaKnown RBP27.5■■□□□ 1.99
CPNE1-207ENST00000414664 DSG1Q02413 1049 aa27.5■■□□□ 1.99
CPNE1-207ENST00000414664 FAM160A1Q05DH4 1040 aa27.5■■□□□ 1.99
CPNE1-207ENST00000414664 KIAA0319Q5VV43 1072 aa27.5■■□□□ 1.99
CPNE1-207ENST00000414664 PPFIBP1Q86W92 1011 aa27.5■■□□□ 1.99
CPNE1-207ENST00000414664 FMR1NBQ8N0W7 255 aaPredicted RBP27.5■■□□□ 1.99
CPNE1-207ENST00000414664 C18orf25Q96B23 403 aaPredicted RBP27.5■■□□□ 1.99
CPNE1-207ENST00000414664 DERAQ9Y315 318 aa27.5■■□□□ 1.99
CPNE1-207ENST00000414664 H3BQ06 376 aaPredicted RBP27.49■■□□□ 1.99
CPNE1-207ENST00000414664 PODXLO00592 558 aa27.49■■□□□ 1.99
CPNE1-207ENST00000414664 C2CD2LO14523 706 aa27.49■■□□□ 1.99
CPNE1-207ENST00000414664 LILRB3O75022 631 aa27.49■■□□□ 1.99
CPNE1-207ENST00000414664 TMEM184AQ6ZMB5 413 aa27.49■■□□□ 1.99
CPNE1-207ENST00000414664 SCFD1Q8WVM8 642 aa27.49■■□□□ 1.99
CPNE1-207ENST00000414664 FAM213AQ9BRX8 229 aa27.49■■□□□ 1.99
CPNE1-207ENST00000414664 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP27.49■■□□□ 1.99
CPNE1-207ENST00000414664 IL18RAPO95256 599 aa27.48■■□□□ 1.99
CPNE1-207ENST00000414664 KLRC2P26717 231 aa27.48■■□□□ 1.99
CPNE1-207ENST00000414664 CREMQ03060 361 aa27.48■■□□□ 1.99
CPNE1-207ENST00000414664 SPAG1Q07617 926 aa27.48■■□□□ 1.99
CPNE1-207ENST00000414664 ZBTB6Q15916 424 aa27.48■■□□□ 1.99
CPNE1-207ENST00000414664 BMT2Q1RMZ1 405 aa27.48■■□□□ 1.99
CPNE1-207ENST00000414664 FAM171A1Q5VUB5 890 aa27.48■■□□□ 1.99
CPNE1-207ENST00000414664 CRELD2Q6UXH1 353 aaPredicted RBP27.48■■□□□ 1.99
CPNE1-207ENST00000414664 HS2ST1Q7LGA3 356 aa27.48■■□□□ 1.99
CPNE1-207ENST00000414664 BEST2Q8NFU1 509 aa27.48■■□□□ 1.99
CPNE1-207ENST00000414664 CASP10Q92851 521 aa27.48■■□□□ 1.99
CPNE1-207ENST00000414664 KLHL5Q96PQ7 755 aa27.48■■□□□ 1.99
CPNE1-207ENST00000414664 CBWD1Q9BRT8 395 aa27.48■■□□□ 1.99
CPNE1-207ENST00000414664 CGNQ9P2M7 1197 aaKnown RBP27.48■■□□□ 1.99
CPNE1-207ENST00000414664 FAM50BQ9Y247 325 aa27.48■■□□□ 1.99
CPNE1-207ENST00000414664 PDCD11Q14690 1871 aaKnown RBP27.48■■□□□ 1.99
CPNE1-207ENST00000414664 EXTL3O43909 919 aa27.47■■□□□ 1.99
CPNE1-207ENST00000414664 TBX10O75333 385 aa27.47■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms