RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 UPP1Q16831 310 aa16.17■□□□□ 0.18
LIMS4-201ENST00000413601 TPRNQ4KMQ1 711 aa16.17■□□□□ 0.18
LIMS4-201ENST00000413601 HERC4Q5GLZ8 1057 aaPredicted RBP16.17■□□□□ 0.18
LIMS4-201ENST00000413601 ZBTB41Q5SVQ8 909 aa16.17■□□□□ 0.18
LIMS4-201ENST00000413601 FAM171A1Q5VUB5 890 aa16.17■□□□□ 0.18
LIMS4-201ENST00000413601 KANK3Q6NY19 840 aa16.17■□□□□ 0.18
LIMS4-201ENST00000413601 PRSS55Q6UWB4 352 aaPredicted RBP16.17■□□□□ 0.18
LIMS4-201ENST00000413601 CEP57Q86XR8 500 aa16.17■□□□□ 0.18
LIMS4-201ENST00000413601 GLYCTKQ8IVS8 523 aa16.17■□□□□ 0.18
LIMS4-201ENST00000413601 C12orf76Q8N812 135 aaPredicted RBP16.17■□□□□ 0.18
LIMS4-201ENST00000413601 SUSD6Q92537 303 aa16.17■□□□□ 0.18
LIMS4-201ENST00000413601 KHSRPQ92945 711 aaKnown RBP eCLIP16.17■□□□□ 0.18
LIMS4-201ENST00000413601 C18orf25Q96B23 403 aaPredicted RBP16.17■□□□□ 0.18
LIMS4-201ENST00000413601 UROC1Q96N76 676 aa16.17■□□□□ 0.18
LIMS4-201ENST00000413601 IKZF4Q9H2S9 585 aa16.17■□□□□ 0.18
LIMS4-201ENST00000413601 RXFP1Q9HBX9 757 aa16.17■□□□□ 0.18
LIMS4-201ENST00000413601 SLC38A7Q9NVC3 462 aa16.17■□□□□ 0.18
LIMS4-201ENST00000413601 PANK4Q9NVE7 773 aa16.17■□□□□ 0.18
LIMS4-201ENST00000413601 KBTBD4Q9NVX7 518 aa16.17■□□□□ 0.18
LIMS4-201ENST00000413601 SEL1LQ9UBV2 794 aa16.17■□□□□ 0.18
LIMS4-201ENST00000413601 CDH22Q9UJ99 828 aa16.17■□□□□ 0.18
LIMS4-201ENST00000413601 A0A0B4J269 797 aa16.16■□□□□ 0.18
LIMS4-201ENST00000413601 C19orf67A6NJJ6 358 aa16.16■□□□□ 0.18
LIMS4-201ENST00000413601 OGTO15294 1046 aa16.16■□□□□ 0.18
LIMS4-201ENST00000413601 POLR2DO15514 142 aaKnown RBP16.16■□□□□ 0.18
LIMS4-201ENST00000413601 FAM189A1O60320 539 aa16.16■□□□□ 0.18
LIMS4-201ENST00000413601 PPP1R37O75864 691 aa16.16■□□□□ 0.18
LIMS4-201ENST00000413601 B3GAT3O94766 335 aa16.16■□□□□ 0.18
LIMS4-201ENST00000413601 ADH1AP07327 375 aa16.16■□□□□ 0.18
LIMS4-201ENST00000413601 CLTAP09496 248 aa16.16■□□□□ 0.18
LIMS4-201ENST00000413601 SPAG1Q07617 926 aa16.16■□□□□ 0.18
LIMS4-201ENST00000413601 BECN1Q14457 450 aa16.16■□□□□ 0.18
LIMS4-201ENST00000413601 RTP2Q5QGT7 225 aa16.16■□□□□ 0.18
LIMS4-201ENST00000413601 RARS2Q5T160 578 aaKnown RBP16.16■□□□□ 0.18
LIMS4-201ENST00000413601 RESP18Q5W5W9 173 aa16.16■□□□□ 0.18
LIMS4-201ENST00000413601 DCLRE1AQ6PJP8 1040 aa16.16■□□□□ 0.18
LIMS4-201ENST00000413601 CD300LGQ6UXG3 332 aa16.16■□□□□ 0.18
LIMS4-201ENST00000413601 IQUBQ8NA54 791 aa16.16■□□□□ 0.18
LIMS4-201ENST00000413601 C3orf58Q8NDZ4 430 aa16.16■□□□□ 0.18
LIMS4-201ENST00000413601 MSTO1Q9BUK6 570 aa16.16■□□□□ 0.18
LIMS4-201ENST00000413601 STRA6Q9BX79 667 aa16.16■□□□□ 0.18
LIMS4-201ENST00000413601 TNMDQ9H2S6 317 aa16.16■□□□□ 0.18
LIMS4-201ENST00000413601 CUEDC2Q9H467 287 aa16.16■□□□□ 0.18
LIMS4-201ENST00000413601 DZANK1Q9NVP4 752 aa16.16■□□□□ 0.18
LIMS4-201ENST00000413601 DENND4AQ7Z401 1863 aa16.16■□□□□ 0.18
LIMS4-201ENST00000413601 TTC26A0AVF1 554 aa16.15■□□□□ 0.18
LIMS4-201ENST00000413601 FRMD3A2A2Y4 597 aa16.15■□□□□ 0.18
LIMS4-201ENST00000413601 TMEM189-UBE2V1I3L0A0 370 aa16.15■□□□□ 0.18
LIMS4-201ENST00000413601 I3L4J1 428 aa16.15■□□□□ 0.18
LIMS4-201ENST00000413601 GCNT3O95395 438 aa16.15■□□□□ 0.18
LIMS4-201ENST00000413601 WEE2P0C1S8 567 aa16.15■□□□□ 0.18
LIMS4-201ENST00000413601 RPL17P18621 184 aaKnown RBP16.15■□□□□ 0.18
LIMS4-201ENST00000413601 CASP5P51878 434 aa16.15■□□□□ 0.18
LIMS4-201ENST00000413601 KCNA1Q09470 495 aa16.15■□□□□ 0.18
LIMS4-201ENST00000413601 ELAVL2Q12926 359 aaKnown RBP16.15■□□□□ 0.18
LIMS4-201ENST00000413601 CBX2Q14781 532 aaPredicted RBP16.15■□□□□ 0.18
LIMS4-201ENST00000413601 CES5AQ6NT32 575 aa16.15■□□□□ 0.18
LIMS4-201ENST00000413601 PALB2Q86YC2 1186 aa16.15■□□□□ 0.18
LIMS4-201ENST00000413601 TMEM130Q8N3G9 435 aa16.15■□□□□ 0.18
LIMS4-201ENST00000413601 FEZF2Q8TBJ5 459 aa16.15■□□□□ 0.18
LIMS4-201ENST00000413601 HVCN1Q96D96 273 aa16.15■□□□□ 0.18
LIMS4-201ENST00000413601 DDX27Q96GQ7 796 aaKnown RBP16.15■□□□□ 0.18
LIMS4-201ENST00000413601 FBXL18Q96ME1 805 aa16.15■□□□□ 0.18
LIMS4-201ENST00000413601 POP1Q99575 1024 aaKnown RBP16.15■□□□□ 0.18
LIMS4-201ENST00000413601 TTPALQ9BTX7 342 aa16.15■□□□□ 0.18
LIMS4-201ENST00000413601 FGFBP2Q9BYJ0 223 aa16.15■□□□□ 0.18
LIMS4-201ENST00000413601 LRRC27Q9C0I9 530 aa16.15■□□□□ 0.18
LIMS4-201ENST00000413601 ADAM7Q9H2U9 754 aa16.15■□□□□ 0.18
LIMS4-201ENST00000413601 PLEKHA5Q9HAU0 1116 aa16.15■□□□□ 0.18
LIMS4-201ENST00000413601 OLFML3Q9NRN5 406 aa16.15■□□□□ 0.18
LIMS4-201ENST00000413601 FAM13BQ9NYF5 915 aa16.15■□□□□ 0.18
LIMS4-201ENST00000413601 SPDYE4A6NLX3 237 aa16.14■□□□□ 0.17
LIMS4-201ENST00000413601 LACTBL1A8MY62 500 aa16.14■□□□□ 0.17
LIMS4-201ENST00000413601 PODXLO00592 558 aa16.14■□□□□ 0.17
LIMS4-201ENST00000413601 SPATA31D3P0C874 917 aa16.14■□□□□ 0.17
LIMS4-201ENST00000413601 MYBP10242 640 aa16.14■□□□□ 0.17
LIMS4-201ENST00000413601 BRCC3P46736 316 aa16.14■□□□□ 0.17
LIMS4-201ENST00000413601 KRT85P78386 507 aa16.14■□□□□ 0.17
LIMS4-201ENST00000413601 AMPD3Q01432 767 aa16.14■□□□□ 0.17
LIMS4-201ENST00000413601 ITIH3Q06033 890 aa16.14■□□□□ 0.17
LIMS4-201ENST00000413601 PPP2R3AQ06190 1150 aa16.14■□□□□ 0.17
LIMS4-201ENST00000413601 ENOX2Q16206 610 aaKnown RBP16.14■□□□□ 0.17
LIMS4-201ENST00000413601 KYAT1Q16773 422 aa16.14■□□□□ 0.17
LIMS4-201ENST00000413601 L1TD1Q5T7N2 865 aaKnown RBP16.14■□□□□ 0.17
LIMS4-201ENST00000413601 SPATA31D4Q6ZUB0 917 aa16.14■□□□□ 0.17
LIMS4-201ENST00000413601 CCDC65Q8IXS2 484 aa16.14■□□□□ 0.17
LIMS4-201ENST00000413601 GPR65Q8IYL9 337 aa16.14■□□□□ 0.17
LIMS4-201ENST00000413601 LEO1Q8WVC0 666 aaPredicted RBP16.14■□□□□ 0.17
LIMS4-201ENST00000413601 SPATA32Q96LK8 384 aa16.14■□□□□ 0.17
LIMS4-201ENST00000413601 ACCSQ96QU6 501 aa16.14■□□□□ 0.17
LIMS4-201ENST00000413601 PHF7Q9BWX1 381 aaPredicted RBP16.14■□□□□ 0.17
LIMS4-201ENST00000413601 TRIM9Q9C026 710 aa16.14■□□□□ 0.17
LIMS4-201ENST00000413601 RPF1Q9H9Y2 349 aaKnown RBP16.14■□□□□ 0.17
LIMS4-201ENST00000413601 MAN1C1Q9NR34 630 aa16.14■□□□□ 0.17
LIMS4-201ENST00000413601 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.14■□□□□ 0.17
LIMS4-201ENST00000413601 FNIP2Q9P278 1114 aa16.14■□□□□ 0.17
LIMS4-201ENST00000413601 TUBGCP4Q9UGJ1 667 aa16.14■□□□□ 0.17
LIMS4-201ENST00000413601 MUC3AQ02505 3323 aa16.14■□□□□ 0.17
LIMS4-201ENST00000413601 BDP1A6H8Y1 2624 aa16.13■□□□□ 0.17
LIMS4-201ENST00000413601 GLUD1P00367 558 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms