RNA–Protein interactions for RNA: ENST00000413354.5

MCF2L-211, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-211ENST00000413354 HDAC7Q8WUI4 952 aa17.14■□□□□ 0.33
MCF2L-211ENST00000413354 FOXD4L4Q8WXT5 416 aaPredicted RBP17.14■□□□□ 0.33
MCF2L-211ENST00000413354 PIK3R5Q8WYR1 880 aa17.14■□□□□ 0.33
MCF2L-211ENST00000413354 DDX12PQ92771 950 aa17.14■□□□□ 0.33
MCF2L-211ENST00000413354 KHSRPQ92945 711 aaKnown RBP eCLIP17.14■□□□□ 0.33
MCF2L-211ENST00000413354 RPGRIP1Q96KN7 1286 aa17.14■□□□□ 0.33
MCF2L-211ENST00000413354 PLEKHA5Q9HAU0 1116 aa17.14■□□□□ 0.33
MCF2L-211ENST00000413354 MAN1C1Q9NR34 630 aa17.14■□□□□ 0.33
MCF2L-211ENST00000413354 CUTAO60888 179 aa17.13■□□□□ 0.33
MCF2L-211ENST00000413354 CLCNKBP51801 687 aa17.13■□□□□ 0.33
MCF2L-211ENST00000413354 UPP1Q16831 310 aa17.13■□□□□ 0.33
MCF2L-211ENST00000413354 TMEM31Q5JXX7 168 aa17.13■□□□□ 0.33
MCF2L-211ENST00000413354 CYP26C1Q6V0L0 522 aa17.13■□□□□ 0.33
MCF2L-211ENST00000413354 C15orf39Q6ZRI6 1047 aa17.13■□□□□ 0.33
MCF2L-211ENST00000413354 DYMQ7RTS9 669 aa17.13■□□□□ 0.33
MCF2L-211ENST00000413354 SFR1Q86XK3 245 aa17.13■□□□□ 0.33
MCF2L-211ENST00000413354 CEP57Q86XR8 500 aa17.13■□□□□ 0.33
MCF2L-211ENST00000413354 RNF135Q8IUD6 432 aa17.13■□□□□ 0.33
MCF2L-211ENST00000413354 CMASQ8NFW8 434 aaPredicted RBP17.13■□□□□ 0.33
MCF2L-211ENST00000413354 B3GALT6Q96L58 329 aa17.13■□□□□ 0.33
MCF2L-211ENST00000413354 FIZ1Q96SL8 496 aa17.13■□□□□ 0.33
MCF2L-211ENST00000413354 LRRC27Q9C0I9 530 aa17.13■□□□□ 0.33
MCF2L-211ENST00000413354 CUEDC2Q9H467 287 aa17.13■□□□□ 0.33
MCF2L-211ENST00000413354 PLEKHA4Q9H4M7 779 aa17.13■□□□□ 0.33
MCF2L-211ENST00000413354 TFIP11Q9UBB9 837 aaKnown RBP17.13■□□□□ 0.33
MCF2L-211ENST00000413354 MYMKA6NI61 221 aa17.12■□□□□ 0.33
MCF2L-211ENST00000413354 PODXLO00592 558 aa17.12■□□□□ 0.33
MCF2L-211ENST00000413354 OGTO15294 1046 aa17.12■□□□□ 0.33
MCF2L-211ENST00000413354 NMT1P30419 496 aaKnown RBP17.12■□□□□ 0.33
MCF2L-211ENST00000413354 RPL9P32969 192 aaKnown RBP17.12■□□□□ 0.33
MCF2L-211ENST00000413354 PPP2R3AQ06190 1150 aa17.12■□□□□ 0.33
MCF2L-211ENST00000413354 PSMD5Q16401 504 aa17.12■□□□□ 0.33
MCF2L-211ENST00000413354 HERC4Q5GLZ8 1057 aaPredicted RBP17.12■□□□□ 0.33
MCF2L-211ENST00000413354 RTP2Q5QGT7 225 aa17.12■□□□□ 0.33
MCF2L-211ENST00000413354 GPR149Q86SP6 731 aa17.12■□□□□ 0.33
MCF2L-211ENST00000413354 C12orf76Q8N812 135 aaPredicted RBP17.12■□□□□ 0.33
MCF2L-211ENST00000413354 ZMAT2Q96NC0 199 aaKnown RBP17.12■□□□□ 0.33
MCF2L-211ENST00000413354 TSPAN18Q96SJ8 248 aa17.12■□□□□ 0.33
MCF2L-211ENST00000413354 RHOBTB2Q9BYZ6 727 aa17.12■□□□□ 0.33
MCF2L-211ENST00000413354 TNMDQ9H2S6 317 aa17.12■□□□□ 0.33
MCF2L-211ENST00000413354 POMKQ9H5K3 350 aa17.12■□□□□ 0.33
MCF2L-211ENST00000413354 GOLGA2P5Q9HBQ8 144 aa17.12■□□□□ 0.33
MCF2L-211ENST00000413354 CFAP45Q9UL16 551 aa17.12■□□□□ 0.33
MCF2L-211ENST00000413354 ANK1P16157 1881 aa17.12■□□□□ 0.33
MCF2L-211ENST00000413354 XPOTO43592 962 aaKnown RBP17.11■□□□□ 0.33
MCF2L-211ENST00000413354 GPR37L1O60883 481 aa17.11■□□□□ 0.33
MCF2L-211ENST00000413354 CXCL8P10145 99 aa17.11■□□□□ 0.33
MCF2L-211ENST00000413354 FGFR3P22607 806 aa17.11■□□□□ 0.33
MCF2L-211ENST00000413354 SOX4Q06945 474 aaPredicted RBP17.11■□□□□ 0.33
MCF2L-211ENST00000413354 ALCAMQ13740 583 aa17.11■□□□□ 0.33
MCF2L-211ENST00000413354 SLC10A6Q3KNW5 377 aa17.11■□□□□ 0.33
MCF2L-211ENST00000413354 SLFN12LQ6IEE8 588 aa17.11■□□□□ 0.33
MCF2L-211ENST00000413354 PRSS55Q6UWB4 352 aaPredicted RBP17.11■□□□□ 0.33
MCF2L-211ENST00000413354 TMC5Q6UXY8 1006 aa17.11■□□□□ 0.33
MCF2L-211ENST00000413354 PDILTQ8N807 584 aa17.11■□□□□ 0.33
MCF2L-211ENST00000413354 SPRYD3Q8NCJ5 442 aa17.11■□□□□ 0.33
MCF2L-211ENST00000413354 DNAJC19Q96DA6 116 aa17.11■□□□□ 0.33
MCF2L-211ENST00000413354 MSTO1Q9BUK6 570 aa17.11■□□□□ 0.33
MCF2L-211ENST00000413354 MRPL44Q9H9J2 332 aaKnown RBP17.11■□□□□ 0.33
MCF2L-211ENST00000413354 RPF1Q9H9Y2 349 aaKnown RBP17.11■□□□□ 0.33
MCF2L-211ENST00000413354 OLFML3Q9NRN5 406 aa17.11■□□□□ 0.33
MCF2L-211ENST00000413354 MUTYHQ9UIF7 546 aa17.11■□□□□ 0.33
MCF2L-211ENST00000413354 EXOC7Q9UPT5 735 aa17.11■□□□□ 0.33
MCF2L-211ENST00000413354 MYO10Q9HD67 2058 aa17.1■□□□□ 0.33
MCF2L-211ENST00000413354 A0A087X0B3 334 aa17.1■□□□□ 0.33
MCF2L-211ENST00000413354 A0A0B4J269 797 aa17.1■□□□□ 0.33
MCF2L-211ENST00000413354 IDEP14735 1019 aa17.1■□□□□ 0.33
MCF2L-211ENST00000413354 AMPD3Q01432 767 aa17.1■□□□□ 0.33
MCF2L-211ENST00000413354 SEZ6Q53EL9 994 aa17.1■□□□□ 0.33
MCF2L-211ENST00000413354 CCDC149Q6ZUS6 474 aa17.1■□□□□ 0.33
MCF2L-211ENST00000413354 ANKS3Q6ZW76 656 aa17.1■□□□□ 0.33
MCF2L-211ENST00000413354 ZNF720Q7Z2F6 126 aa17.1■□□□□ 0.33
MCF2L-211ENST00000413354 PALB2Q86YC2 1186 aa17.1■□□□□ 0.33
MCF2L-211ENST00000413354 GLYCTKQ8IVS8 523 aa17.1■□□□□ 0.33
MCF2L-211ENST00000413354 CD302Q8IX05 232 aa17.1■□□□□ 0.33
MCF2L-211ENST00000413354 CCDC65Q8IXS2 484 aa17.1■□□□□ 0.33
MCF2L-211ENST00000413354 IQUBQ8NA54 791 aa17.1■□□□□ 0.33
MCF2L-211ENST00000413354 TDRD5Q8NAT2 981 aaKnown RBP17.1■□□□□ 0.33
MCF2L-211ENST00000413354 LNX1Q8TBB1 728 aaPredicted RBP17.1■□□□□ 0.33
MCF2L-211ENST00000413354 PANK2Q9BZ23 570 aa17.1■□□□□ 0.33
MCF2L-211ENST00000413354 HAPLN2Q9GZV7 340 aa17.1■□□□□ 0.33
MCF2L-211ENST00000413354 MAGEF1Q9HAY2 307 aa17.1■□□□□ 0.33
MCF2L-211ENST00000413354 TSHZ2Q9NRE2 1034 aa17.1■□□□□ 0.33
MCF2L-211ENST00000413354 ZDHHC7Q9NXF8 308 aa17.1■□□□□ 0.33
MCF2L-211ENST00000413354 UBQLN1Q9UMX0 589 aaKnown RBP17.1■□□□□ 0.33
MCF2L-211ENST00000413354 USTQ9Y2C2 406 aa17.1■□□□□ 0.33
MCF2L-211ENST00000413354 NUB1Q9Y5A7 615 aa17.1■□□□□ 0.33
MCF2L-211ENST00000413354 TTC26A0AVF1 554 aa17.09■□□□□ 0.33
MCF2L-211ENST00000413354 FRMD3A2A2Y4 597 aa17.09■□□□□ 0.33
MCF2L-211ENST00000413354 SYN3O14994 580 aa17.09■□□□□ 0.33
MCF2L-211ENST00000413354 TGM5O43548 720 aa17.09■□□□□ 0.33
MCF2L-211ENST00000413354 PPP1R37O75864 691 aa17.09■□□□□ 0.33
MCF2L-211ENST00000413354 WEE2P0C1S8 567 aa17.09■□□□□ 0.33
MCF2L-211ENST00000413354 RPL17P18621 184 aaKnown RBP17.09■□□□□ 0.33
MCF2L-211ENST00000413354 CYP3A5P20815 502 aa17.09■□□□□ 0.33
MCF2L-211ENST00000413354 POSTNQ15063 836 aa17.09■□□□□ 0.33
MCF2L-211ENST00000413354 FOXD4L6Q3SYB3 417 aaPredicted RBP17.09■□□□□ 0.33
MCF2L-211ENST00000413354 ZC2HC1CQ53FD0 456 aaPredicted RBP17.09■□□□□ 0.33
MCF2L-211ENST00000413354 LIN9Q5TKA1 542 aa17.09■□□□□ 0.33
MCF2L-211ENST00000413354 FOXD4L3Q6VB84 417 aaPredicted RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms