RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 AGPAT3Q9NRZ7 376 aa14.34□□□□□ -0.11
HDAC8-210ENST00000412342 PUF60Q9UHX1 559 aaKnown RBP14.34□□□□□ -0.11
HDAC8-210ENST00000412342 HIDE1A8MVS5 230 aa14.33□□□□□ -0.12
HDAC8-210ENST00000412342 LILRB3O75022 631 aa14.33□□□□□ -0.12
HDAC8-210ENST00000412342 SOD2P04179 222 aa14.33□□□□□ -0.12
HDAC8-210ENST00000412342 CTSAP10619 480 aa14.33□□□□□ -0.12
HDAC8-210ENST00000412342 GTF2F1P35269 517 aaKnown RBP eCLIP14.33□□□□□ -0.12
HDAC8-210ENST00000412342 CLCNKBP51801 687 aa14.33□□□□□ -0.12
HDAC8-210ENST00000412342 UBE2HP62256 183 aa14.33□□□□□ -0.12
HDAC8-210ENST00000412342 PPP2R3AQ06190 1150 aa14.33□□□□□ -0.12
HDAC8-210ENST00000412342 SPAG1Q07617 926 aa14.33□□□□□ -0.12
HDAC8-210ENST00000412342 UPP1Q16831 310 aa14.33□□□□□ -0.12
HDAC8-210ENST00000412342 PLPP4Q5VZY2 271 aa14.33□□□□□ -0.12
HDAC8-210ENST00000412342 PDE12Q6L8Q7 609 aaKnown RBP14.33□□□□□ -0.12
HDAC8-210ENST00000412342 FUT10Q6P4F1 479 aa14.33□□□□□ -0.12
HDAC8-210ENST00000412342 TAS1R1Q7RTX1 841 aa14.33□□□□□ -0.12
HDAC8-210ENST00000412342 NELFCDQ8IXH7 590 aa14.33□□□□□ -0.12
HDAC8-210ENST00000412342 VPS52Q8N1B4 723 aa14.33□□□□□ -0.12
HDAC8-210ENST00000412342 SAAL1Q96ER3 474 aa14.33□□□□□ -0.12
HDAC8-210ENST00000412342 FBXL18Q96ME1 805 aa14.33□□□□□ -0.12
HDAC8-210ENST00000412342 HERC2P3Q9BVR0 1158 aa14.33□□□□□ -0.12
HDAC8-210ENST00000412342 COLEC11Q9BWP8 271 aa14.33□□□□□ -0.12
HDAC8-210ENST00000412342 GPR62Q9BZJ7 368 aa14.33□□□□□ -0.12
HDAC8-210ENST00000412342 KCTD10Q9H3F6 313 aa14.33□□□□□ -0.12
HDAC8-210ENST00000412342 RPF1Q9H9Y2 349 aaKnown RBP14.33□□□□□ -0.12
HDAC8-210ENST00000412342 NGRNQ9NPE2 291 aaKnown RBP14.33□□□□□ -0.12
HDAC8-210ENST00000412342 SLC38A7Q9NVC3 462 aa14.33□□□□□ -0.12
HDAC8-210ENST00000412342 TUBGCP4Q9UGJ1 667 aa14.33□□□□□ -0.12
HDAC8-210ENST00000412342 ADAM28Q9UKQ2 775 aa14.33□□□□□ -0.12
HDAC8-210ENST00000412342 IRAK3Q9Y616 596 aa14.33□□□□□ -0.12
HDAC8-210ENST00000412342 XIRP2A4UGR9 3374 aa14.32□□□□□ -0.12
HDAC8-210ENST00000412342 C2orf71A6NGG8 1288 aa14.32□□□□□ -0.12
HDAC8-210ENST00000412342 EXTL3O43909 919 aa14.32□□□□□ -0.12
HDAC8-210ENST00000412342 PRPF40AO75400 957 aaKnown RBP14.32□□□□□ -0.12
HDAC8-210ENST00000412342 NFICP08651 508 aa14.32□□□□□ -0.12
HDAC8-210ENST00000412342 SNRPFP62306 86 aaKnown RBP14.32□□□□□ -0.12
HDAC8-210ENST00000412342 PTPN14Q15678 1187 aa14.32□□□□□ -0.12
HDAC8-210ENST00000412342 KNOP1Q1ED39 458 aaKnown RBP14.32□□□□□ -0.12
HDAC8-210ENST00000412342 CTC1Q2NKJ3 1217 aa14.32□□□□□ -0.12
HDAC8-210ENST00000412342 ARMCX5Q6P1M9 558 aa14.32□□□□□ -0.12
HDAC8-210ENST00000412342 BRSK2Q8IWQ3 736 aa14.32□□□□□ -0.12
HDAC8-210ENST00000412342 CD302Q8IX05 232 aa14.32□□□□□ -0.12
HDAC8-210ENST00000412342 C12orf56Q8IXR9 622 aa14.32□□□□□ -0.12
HDAC8-210ENST00000412342 MRPL43Q8N983 215 aaKnown RBP14.32□□□□□ -0.12
HDAC8-210ENST00000412342 AUTS2Q8WXX7 1259 aa14.32□□□□□ -0.12
HDAC8-210ENST00000412342 ERCC4Q92889 916 aaPredicted RBP14.32□□□□□ -0.12
HDAC8-210ENST00000412342 UROC1Q96N76 676 aa14.32□□□□□ -0.12
HDAC8-210ENST00000412342 TSPAN18Q96SJ8 248 aa14.32□□□□□ -0.12
HDAC8-210ENST00000412342 FAM213AQ9BRX8 229 aa14.32□□□□□ -0.12
HDAC8-210ENST00000412342 PCIF1Q9H4Z3 704 aa14.32□□□□□ -0.12
HDAC8-210ENST00000412342 ASB7Q9H672 318 aa14.32□□□□□ -0.12
HDAC8-210ENST00000412342 ENTPD7Q9NQZ7 604 aa14.32□□□□□ -0.12
HDAC8-210ENST00000412342 CHST7Q9NS84 486 aa14.32□□□□□ -0.12
HDAC8-210ENST00000412342 HSPBP1Q9NZL4 362 aa14.32□□□□□ -0.12
HDAC8-210ENST00000412342 TSC2P49815 1807 aa14.31□□□□□ -0.12
HDAC8-210ENST00000412342 PLXNA3P51805 1871 aa14.31□□□□□ -0.12
HDAC8-210ENST00000412342 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.31□□□□□ -0.12
HDAC8-210ENST00000412342 GOLGA8IPA6NC78 632 aa14.31□□□□□ -0.12
HDAC8-210ENST00000412342 GOLGA8JA6NMD2 632 aa14.31□□□□□ -0.12
HDAC8-210ENST00000412342 KIAA0391O15091 583 aaKnown RBP14.31□□□□□ -0.12
HDAC8-210ENST00000412342 LDHAP00338 332 aaKnown RBP14.31□□□□□ -0.12
HDAC8-210ENST00000412342 CYP3A5P20815 502 aa14.31□□□□□ -0.12
HDAC8-210ENST00000412342 LRPAP1P30533 357 aa14.31□□□□□ -0.12
HDAC8-210ENST00000412342 LTBRP36941 435 aa14.31□□□□□ -0.12
HDAC8-210ENST00000412342 KCNC3Q14003 757 aa14.31□□□□□ -0.12
HDAC8-210ENST00000412342 SMC1AQ14683 1233 aaKnown RBP14.31□□□□□ -0.12
HDAC8-210ENST00000412342 DUSP6Q16828 381 aa14.31□□□□□ -0.12
HDAC8-210ENST00000412342 KIAA0319Q5VV43 1072 aa14.31□□□□□ -0.12
HDAC8-210ENST00000412342 JADE1Q6IE81 842 aa14.31□□□□□ -0.12
HDAC8-210ENST00000412342 DCLRE1AQ6PJP8 1040 aa14.31□□□□□ -0.12
HDAC8-210ENST00000412342 TMC7Q7Z402 723 aa14.31□□□□□ -0.12
HDAC8-210ENST00000412342 EFCAB13Q8IY85 973 aa14.31□□□□□ -0.12
HDAC8-210ENST00000412342 GPD1LQ8N335 351 aa14.31□□□□□ -0.12
HDAC8-210ENST00000412342 HASPINQ8TF76 798 aa14.31□□□□□ -0.12
HDAC8-210ENST00000412342 TMEM174Q8WUU8 243 aa14.31□□□□□ -0.12
HDAC8-210ENST00000412342 KIF12Q96FN5 646 aa14.31□□□□□ -0.12
HDAC8-210ENST00000412342 CCDC34Q96HJ3 373 aa14.31□□□□□ -0.12
HDAC8-210ENST00000412342 STK39Q9UEW8 545 aa14.31□□□□□ -0.12
HDAC8-210ENST00000412342 UBQLN1Q9UMX0 589 aaKnown RBP14.31□□□□□ -0.12
HDAC8-210ENST00000412342 DERAQ9Y315 318 aa14.31□□□□□ -0.12
HDAC8-210ENST00000412342 C2CD2Q9Y426 696 aa14.31□□□□□ -0.12
HDAC8-210ENST00000412342 PCDHA5Q9Y5H7 936 aa14.31□□□□□ -0.12
HDAC8-210ENST00000412342 UNC80Q8N2C7 3258 aa14.3□□□□□ -0.12
HDAC8-210ENST00000412342 PODXLO00592 558 aa14.3□□□□□ -0.12
HDAC8-210ENST00000412342 CLIC2O15247 247 aa14.3□□□□□ -0.12
HDAC8-210ENST00000412342 LINC01565O15544 149 aa14.3□□□□□ -0.12
HDAC8-210ENST00000412342 KINO60870 393 aaKnown RBP14.3□□□□□ -0.12
HDAC8-210ENST00000412342 GLP2RO95838 553 aa14.3□□□□□ -0.12
HDAC8-210ENST00000412342 RPL9P32969 192 aaKnown RBP14.3□□□□□ -0.12
HDAC8-210ENST00000412342 NRIP1P48552 1158 aa14.3□□□□□ -0.12
HDAC8-210ENST00000412342 GUCY2FP51841 1108 aa14.3□□□□□ -0.12
HDAC8-210ENST00000412342 DSG1Q02413 1049 aa14.3□□□□□ -0.12
HDAC8-210ENST00000412342 SPATA1Q5VX52 437 aa14.3□□□□□ -0.12
HDAC8-210ENST00000412342 CBWD2Q8IUF1 395 aa14.3□□□□□ -0.12
HDAC8-210ENST00000412342 GUF1Q8N442 669 aaKnown RBP14.3□□□□□ -0.12
HDAC8-210ENST00000412342 EFHBQ8N7U6 833 aa14.3□□□□□ -0.12
HDAC8-210ENST00000412342 VN1R2Q8NFZ6 395 aa14.3□□□□□ -0.12
HDAC8-210ENST00000412342 MICAL1Q8TDZ2 1067 aa14.3□□□□□ -0.12
HDAC8-210ENST00000412342 CCDC47Q96A33 483 aaKnown RBP14.3□□□□□ -0.12
HDAC8-210ENST00000412342 PABPC5Q96DU9 382 aaKnown RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms