RNA–Protein interactions for RNA: ENST00000412056.5

CPNE1-206, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-206ENST00000412056 NFICP08651 508 aa15.16■□□□□ 0.02
CPNE1-206ENST00000412056 MCM4P33991 863 aa15.16■□□□□ 0.02
CPNE1-206ENST00000412056 PRCPP42785 496 aa15.16■□□□□ 0.02
CPNE1-206ENST00000412056 SNRPFP62306 86 aaKnown RBP15.16■□□□□ 0.02
CPNE1-206ENST00000412056 PLCB3Q01970 1234 aa15.16■□□□□ 0.02
CPNE1-206ENST00000412056 CBWD2Q8IUF1 395 aa15.16■□□□□ 0.02
CPNE1-206ENST00000412056 TMEM169Q96HH4 297 aa15.16■□□□□ 0.02
CPNE1-206ENST00000412056 VN1R3Q9BXE9 311 aa15.16■□□□□ 0.02
CPNE1-206ENST00000412056 SLC38A7Q9NVC3 462 aa15.16■□□□□ 0.02
CPNE1-206ENST00000412056 RBAKQ9NYW8 714 aaPredicted RBP15.16■□□□□ 0.02
CPNE1-206ENST00000412056 CGNQ9P2M7 1197 aaKnown RBP15.16■□□□□ 0.02
CPNE1-206ENST00000412056 TUBGCP4Q9UGJ1 667 aa15.16■□□□□ 0.02
CPNE1-206ENST00000412056 MTCH2Q9Y6C9 303 aa15.16■□□□□ 0.02
CPNE1-206ENST00000412056 CHD9Q3L8U1 2897 aa15.16■□□□□ 0.02
CPNE1-206ENST00000412056 CARNS1A5YM72 827 aa15.15■□□□□ 0.02
CPNE1-206ENST00000412056 KIF4AO95239 1232 aa15.15■□□□□ 0.02
CPNE1-206ENST00000412056 NR3C1P04150 777 aa15.15■□□□□ 0.02
CPNE1-206ENST00000412056 CD44P16070 742 aaKnown RBP15.15■□□□□ 0.02
CPNE1-206ENST00000412056 BMP6P22004 513 aa15.15■□□□□ 0.02
CPNE1-206ENST00000412056 IRS1P35568 1242 aa15.15■□□□□ 0.02
CPNE1-206ENST00000412056 GUCY2FP51841 1108 aa15.15■□□□□ 0.02
CPNE1-206ENST00000412056 UBE3AQ05086 875 aa15.15■□□□□ 0.02
CPNE1-206ENST00000412056 MORC3Q14149 939 aa15.15■□□□□ 0.02
CPNE1-206ENST00000412056 HSP90AA2PQ14568 343 aaPredicted RBP15.15■□□□□ 0.02
CPNE1-206ENST00000412056 COBLL1Q53SF7 1204 aa15.15■□□□□ 0.02
CPNE1-206ENST00000412056 CD302Q8IX05 232 aa15.15■□□□□ 0.02
CPNE1-206ENST00000412056 EFCAB13Q8IY85 973 aa15.15■□□□□ 0.02
CPNE1-206ENST00000412056 XXYLT1Q8NBI6 393 aa15.15■□□□□ 0.02
CPNE1-206ENST00000412056 GOLGA5Q8TBA6 731 aa15.15■□□□□ 0.02
CPNE1-206ENST00000412056 HASPINQ8TF76 798 aa15.15■□□□□ 0.02
CPNE1-206ENST00000412056 MRPL38Q96DV4 380 aaKnown RBP15.15■□□□□ 0.02
CPNE1-206ENST00000412056 FBXL18Q96ME1 805 aa15.15■□□□□ 0.02
CPNE1-206ENST00000412056 COLEC11Q9BWP8 271 aa15.15■□□□□ 0.02
CPNE1-206ENST00000412056 LMAN2LQ9H0V9 348 aa15.15■□□□□ 0.02
CPNE1-206ENST00000412056 KIAA1468Q9P260 1216 aa15.15■□□□□ 0.02
CPNE1-206ENST00000412056 TRAF3IP3Q9Y228 551 aa15.15■□□□□ 0.02
CPNE1-206ENST00000412056 LZTS1Q9Y250 596 aa15.15■□□□□ 0.02
CPNE1-206ENST00000412056 PCDHGC5Q9Y5F6 944 aa15.15■□□□□ 0.02
CPNE1-206ENST00000412056 CHD7Q9P2D1 2997 aa15.14■□□□□ 0.01
CPNE1-206ENST00000412056 TULP1O00294 542 aaPredicted RBP15.14■□□□□ 0.01
CPNE1-206ENST00000412056 CALUO43852 315 aaPredicted RBP15.14■□□□□ 0.01
CPNE1-206ENST00000412056 IL18RAPO95256 599 aa15.14■□□□□ 0.01
CPNE1-206ENST00000412056 POU3F3P20264 500 aaPredicted RBP15.14■□□□□ 0.01
CPNE1-206ENST00000412056 IGFBP6P24592 240 aaPredicted RBP15.14■□□□□ 0.01
CPNE1-206ENST00000412056 CLCNKBP51801 687 aa15.14■□□□□ 0.01
CPNE1-206ENST00000412056 POU5F1Q01860 360 aaKnown RBP15.14■□□□□ 0.01
CPNE1-206ENST00000412056 KRT17Q04695 432 aa15.14■□□□□ 0.01
CPNE1-206ENST00000412056 TMEM132DQ14C87 1099 aa15.14■□□□□ 0.01
CPNE1-206ENST00000412056 ZBTB6Q15916 424 aa15.14■□□□□ 0.01
CPNE1-206ENST00000412056 PTPROQ16827 1216 aa15.14■□□□□ 0.01
CPNE1-206ENST00000412056 ZCWPW2Q504Y3 356 aa15.14■□□□□ 0.01
CPNE1-206ENST00000412056 MICALL1Q8N3F8 863 aa15.14■□□□□ 0.01
CPNE1-206ENST00000412056 RDH13Q8NBN7 331 aa15.14■□□□□ 0.01
CPNE1-206ENST00000412056 FAM84AQ96KN4 292 aa15.14■□□□□ 0.01
CPNE1-206ENST00000412056 ASB7Q9H672 318 aa15.14■□□□□ 0.01
CPNE1-206ENST00000412056 PDE11AQ9HCR9 933 aa15.14■□□□□ 0.01
CPNE1-206ENST00000412056 TLR9Q9NR96 1032 aa15.14■□□□□ 0.01
CPNE1-206ENST00000412056 DMAC2Q9NW81 257 aa15.14■□□□□ 0.01
CPNE1-206ENST00000412056 LMCD1Q9NZU5 365 aa15.14■□□□□ 0.01
CPNE1-206ENST00000412056 ADAM28Q9UKQ2 775 aa15.14■□□□□ 0.01
CPNE1-206ENST00000412056 UBQLN1Q9UMX0 589 aaKnown RBP15.14■□□□□ 0.01
CPNE1-206ENST00000412056 TSC2P49815 1807 aa15.13■□□□□ 0.01
CPNE1-206ENST00000412056 ZNF233A6NK53 670 aa15.13■□□□□ 0.01
CPNE1-206ENST00000412056 PODXLO00592 558 aa15.13■□□□□ 0.01
CPNE1-206ENST00000412056 FSCN2O14926 492 aa15.13■□□□□ 0.01
CPNE1-206ENST00000412056 EXOC3O60645 756 aa15.13■□□□□ 0.01
CPNE1-206ENST00000412056 MBD3O95983 291 aa15.13■□□□□ 0.01
CPNE1-206ENST00000412056 PMS1P54277 932 aaKnown RBP15.13■□□□□ 0.01
CPNE1-206ENST00000412056 ERVFC1P60507 584 aa15.13■□□□□ 0.01
CPNE1-206ENST00000412056 SNRNP35Q16560 246 aaKnown RBP15.13■□□□□ 0.01
CPNE1-206ENST00000412056 UPP1Q16831 310 aa15.13■□□□□ 0.01
CPNE1-206ENST00000412056 SPATA1Q5VX52 437 aa15.13■□□□□ 0.01
CPNE1-206ENST00000412056 PLPP4Q5VZY2 271 aa15.13■□□□□ 0.01
CPNE1-206ENST00000412056 FUT10Q6P4F1 479 aa15.13■□□□□ 0.01
CPNE1-206ENST00000412056 CD300LGQ6UXG3 332 aa15.13■□□□□ 0.01
CPNE1-206ENST00000412056 DDX53Q86TM3 631 aaKnown RBP15.13■□□□□ 0.01
CPNE1-206ENST00000412056 SLC9A9Q8IVB4 645 aa15.13■□□□□ 0.01
CPNE1-206ENST00000412056 ADSSL1Q8N142 457 aa15.13■□□□□ 0.01
CPNE1-206ENST00000412056 VPS52Q8N1B4 723 aa15.13■□□□□ 0.01
CPNE1-206ENST00000412056 C3orf58Q8NDZ4 430 aa15.13■□□□□ 0.01
CPNE1-206ENST00000412056 UROC1Q96N76 676 aa15.13■□□□□ 0.01
CPNE1-206ENST00000412056 TSPAN18Q96SJ8 248 aa15.13■□□□□ 0.01
CPNE1-206ENST00000412056 GTPBP4Q9BZE4 634 aaKnown RBP15.13■□□□□ 0.01
CPNE1-206ENST00000412056 ZBP1Q9H171 429 aa15.13■□□□□ 0.01
CPNE1-206ENST00000412056 KIAA1586Q9HCI6 787 aa15.13■□□□□ 0.01
CPNE1-206ENST00000412056 PUF60Q9UHX1 559 aaKnown RBP15.13■□□□□ 0.01
CPNE1-206ENST00000412056 STXBP5LQ9Y2K9 1186 aa15.13■□□□□ 0.01
CPNE1-206ENST00000412056 DERAQ9Y315 318 aa15.13■□□□□ 0.01
CPNE1-206ENST00000412056 PLXNA3P51805 1871 aa15.12■□□□□ 0.01
CPNE1-206ENST00000412056 TRIM49BA6NDI0 452 aa15.12■□□□□ 0.01
CPNE1-206ENST00000412056 PPP1R3GB7ZBB8 358 aa15.12■□□□□ 0.01
CPNE1-206ENST00000412056 TMEM189-UBE2V1I3L0A0 370 aa15.12■□□□□ 0.01
CPNE1-206ENST00000412056 XPOTO43592 962 aaKnown RBP15.12■□□□□ 0.01
CPNE1-206ENST00000412056 B3GAT3O94766 335 aa15.12■□□□□ 0.01
CPNE1-206ENST00000412056 EFEMP2O95967 443 aa15.12■□□□□ 0.01
CPNE1-206ENST00000412056 CYP3A5P20815 502 aa15.12■□□□□ 0.01
CPNE1-206ENST00000412056 NR2F2P24468 414 aa15.12■□□□□ 0.01
CPNE1-206ENST00000412056 LRPAP1P30533 357 aa15.12■□□□□ 0.01
CPNE1-206ENST00000412056 CASP4P49662 377 aa15.12■□□□□ 0.01
CPNE1-206ENST00000412056 CYP24A1Q07973 514 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms