RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 CRHR1P34998 444 aa3.44□□□□□ -1.86
HMGB3P2-201ENST00000411913 CCT4P50991 539 aaKnown RBP3.44□□□□□ -1.86
HMGB3P2-201ENST00000411913 CYP2A13Q16696 494 aa3.44□□□□□ -1.86
HMGB3P2-201ENST00000411913 FNDC3BQ53EP0 1204 aaKnown RBP3.44□□□□□ -1.86
HMGB3P2-201ENST00000411913 RRP12Q5JTH9 1297 aaKnown RBP3.44□□□□□ -1.86
HMGB3P2-201ENST00000411913 KAZNQ674X7 775 aa3.44□□□□□ -1.86
HMGB3P2-201ENST00000411913 C11orf87Q6NUJ2 197 aa3.44□□□□□ -1.86
HMGB3P2-201ENST00000411913 HOMER1Q86YM7 354 aa3.44□□□□□ -1.86
HMGB3P2-201ENST00000411913 LNX2Q8N448 690 aa3.44□□□□□ -1.86
HMGB3P2-201ENST00000411913 EFHBQ8N7U6 833 aa3.44□□□□□ -1.86
HMGB3P2-201ENST00000411913 VGLL2Q8N8G2 317 aa3.44□□□□□ -1.86
HMGB3P2-201ENST00000411913 ZNF480Q8WV37 535 aa3.44□□□□□ -1.86
HMGB3P2-201ENST00000411913 APPBP2Q92624 585 aa3.44□□□□□ -1.86
HMGB3P2-201ENST00000411913 NACC2Q96BF6 587 aa3.44□□□□□ -1.86
HMGB3P2-201ENST00000411913 ANO3Q9BYT9 981 aa3.44□□□□□ -1.86
HMGB3P2-201ENST00000411913 TMX1Q9H3N1 280 aa3.44□□□□□ -1.86
HMGB3P2-201ENST00000411913 UNKLQ9H9P5 680 aaKnown RBP3.44□□□□□ -1.86
HMGB3P2-201ENST00000411913 FANCLQ9NW38 375 aa3.44□□□□□ -1.86
HMGB3P2-201ENST00000411913 PRSS50Q9UI38 385 aa3.44□□□□□ -1.86
HMGB3P2-201ENST00000411913 KCNG1Q9UIX4 513 aa3.44□□□□□ -1.86
HMGB3P2-201ENST00000411913 TP73O15350 636 aa3.43□□□□□ -1.86
HMGB3P2-201ENST00000411913 TMEM127O75204 238 aa3.43□□□□□ -1.86
HMGB3P2-201ENST00000411913 WT1P19544 449 aaPredicted RBP3.43□□□□□ -1.86
HMGB3P2-201ENST00000411913 CTSSP25774 331 aa3.43□□□□□ -1.86
HMGB3P2-201ENST00000411913 FOLR3P41439 243 aa3.43□□□□□ -1.86
HMGB3P2-201ENST00000411913 VAV2P52735 878 aa3.43□□□□□ -1.86
HMGB3P2-201ENST00000411913 GRM1Q13255 1194 aa3.43□□□□□ -1.86
HMGB3P2-201ENST00000411913 SQSTM1Q13501 440 aa3.43□□□□□ -1.86
HMGB3P2-201ENST00000411913 RUSC1-AS1Q66K80 236 aa3.43□□□□□ -1.86
HMGB3P2-201ENST00000411913 FCRLBQ6BAA4 426 aa3.43□□□□□ -1.86
HMGB3P2-201ENST00000411913 KIAA0907Q7Z7F0 614 aaPredicted RBP3.43□□□□□ -1.86
HMGB3P2-201ENST00000411913 AMIGO2Q86SJ2 522 aa3.43□□□□□ -1.86
HMGB3P2-201ENST00000411913 DRC7Q8IY82 874 aa3.43□□□□□ -1.86
HMGB3P2-201ENST00000411913 SYNPOQ8N3V7 929 aa3.43□□□□□ -1.86
HMGB3P2-201ENST00000411913 OR14C36Q8NHC7 312 aa3.43□□□□□ -1.86
HMGB3P2-201ENST00000411913 ADGRE3Q9BY15 652 aa3.43□□□□□ -1.86
HMGB3P2-201ENST00000411913 USP25Q9UHP3 1055 aa3.43□□□□□ -1.86
HMGB3P2-201ENST00000411913 WNT6Q9Y6F9 365 aa3.43□□□□□ -1.86
HMGB3P2-201ENST00000411913 TRGV11A0A075B6L2 103 aa3.42□□□□□ -1.86
HMGB3P2-201ENST00000411913 YY2O15391 372 aa3.42□□□□□ -1.86
HMGB3P2-201ENST00000411913 ADCY6O43306 1168 aa3.42□□□□□ -1.86
HMGB3P2-201ENST00000411913 POMCP01189 267 aa3.42□□□□□ -1.86
HMGB3P2-201ENST00000411913 PRR35P0CG20 571 aa3.42□□□□□ -1.86
HMGB3P2-201ENST00000411913 TKTP29401 623 aaKnown RBP3.42□□□□□ -1.86
HMGB3P2-201ENST00000411913 CCKBRP32239 447 aa3.42□□□□□ -1.86
HMGB3P2-201ENST00000411913 SOX10P56693 466 aa3.42□□□□□ -1.86
HMGB3P2-201ENST00000411913 TUBA4AP68366 448 aa3.42□□□□□ -1.86
HMGB3P2-201ENST00000411913 LLGL1Q15334 1064 aa3.42□□□□□ -1.86
HMGB3P2-201ENST00000411913 ETFDHQ16134 617 aa3.42□□□□□ -1.86
HMGB3P2-201ENST00000411913 ZNF626Q68DY1 528 aa3.42□□□□□ -1.86
HMGB3P2-201ENST00000411913 C16orf86Q6ZW13 317 aa3.42□□□□□ -1.86
HMGB3P2-201ENST00000411913 REPS2Q8NFH8 660 aa3.42□□□□□ -1.86
HMGB3P2-201ENST00000411913 SSH3Q8TE77 659 aa3.42□□□□□ -1.86
HMGB3P2-201ENST00000411913 CHTF18Q8WVB6 975 aa3.42□□□□□ -1.86
HMGB3P2-201ENST00000411913 RPL36ALQ969Q0 106 aaKnown RBP3.42□□□□□ -1.86
HMGB3P2-201ENST00000411913 RGMAQ96B86 450 aa3.42□□□□□ -1.86
HMGB3P2-201ENST00000411913 FEZ1Q99689 392 aa3.42□□□□□ -1.86
HMGB3P2-201ENST00000411913 WACQ9BTA9 647 aa3.42□□□□□ -1.86
HMGB3P2-201ENST00000411913 PCGF6Q9BYE7 350 aa3.42□□□□□ -1.86
HMGB3P2-201ENST00000411913 NRIP3Q9NQ35 241 aa3.42□□□□□ -1.86
HMGB3P2-201ENST00000411913 THG1LQ9NWX6 298 aaKnown RBP3.42□□□□□ -1.86
HMGB3P2-201ENST00000411913 FLRT1Q9NZU1 646 aa3.42□□□□□ -1.86
HMGB3P2-201ENST00000411913 PNPLA7Q6ZV29 1317 aa3.42□□□□□ -1.86
HMGB3P2-201ENST00000411913 RPTORQ8N122 1335 aa3.42□□□□□ -1.86
HMGB3P2-201ENST00000411913 CCDC78A2IDD5 438 aa3.41□□□□□ -1.86
HMGB3P2-201ENST00000411913 LCHNA4D1U4 455 aa3.41□□□□□ -1.86
HMGB3P2-201ENST00000411913 KELP23276 732 aa3.41□□□□□ -1.86
HMGB3P2-201ENST00000411913 GCSHP23434 173 aa3.41□□□□□ -1.86
HMGB3P2-201ENST00000411913 LSP1P33241 339 aa3.41□□□□□ -1.86
HMGB3P2-201ENST00000411913 KPNA1P52294 538 aaPredicted RBP3.41□□□□□ -1.86
HMGB3P2-201ENST00000411913 SLC10A2Q12908 348 aaPredicted RBP3.41□□□□□ -1.86
HMGB3P2-201ENST00000411913 KLF9Q13886 244 aaPredicted RBP3.41□□□□□ -1.86
HMGB3P2-201ENST00000411913 SF3B3Q15393 1217 aaKnown RBP3.41□□□□□ -1.86
HMGB3P2-201ENST00000411913 TCEA2Q15560 299 aa3.41□□□□□ -1.86
HMGB3P2-201ENST00000411913 TAF7LQ5H9L4 462 aa3.41□□□□□ -1.86
HMGB3P2-201ENST00000411913 RNF187Q5TA31 235 aaPredicted RBP3.41□□□□□ -1.86
HMGB3P2-201ENST00000411913 ZNF517Q6ZMY9 492 aaPredicted RBP3.41□□□□□ -1.86
HMGB3P2-201ENST00000411913 PEG10Q86TG7 708 aaKnown RBP3.41□□□□□ -1.86
HMGB3P2-201ENST00000411913 NXPE1Q8N323 547 aa3.41□□□□□ -1.86
HMGB3P2-201ENST00000411913 FBXL20Q96IG2 436 aa3.41□□□□□ -1.86
HMGB3P2-201ENST00000411913 PAWRQ96IZ0 340 aaKnown RBP3.41□□□□□ -1.86
HMGB3P2-201ENST00000411913 ZNF48Q96MX3 618 aaPredicted RBP3.41□□□□□ -1.86
HMGB3P2-201ENST00000411913 MRI1Q9BV20 369 aa3.41□□□□□ -1.86
HMGB3P2-201ENST00000411913 WNT8AQ9H1J5 351 aa3.41□□□□□ -1.86
HMGB3P2-201ENST00000411913 SLKQ9H2G2 1235 aaPredicted RBP3.41□□□□□ -1.86
HMGB3P2-201ENST00000411913 BHMT2Q9H2M3 363 aa3.41□□□□□ -1.86
HMGB3P2-201ENST00000411913 TMPRSS11EQ9UL52 423 aa3.41□□□□□ -1.86
HMGB3P2-201ENST00000411913 TBC1D30Q9Y2I9 924 aa3.41□□□□□ -1.86
HMGB3P2-201ENST00000411913 PRKAB1Q9Y478 270 aa3.41□□□□□ -1.86
HMGB3P2-201ENST00000411913 PPP2R3BQ9Y5P8 575 aa3.41□□□□□ -1.86
HMGB3P2-201ENST00000411913 TGM5O43548 720 aa3.4□□□□□ -1.87
HMGB3P2-201ENST00000411913 PHF2O75151 1096 aa3.4□□□□□ -1.87
HMGB3P2-201ENST00000411913 F2P00734 622 aa3.4□□□□□ -1.87
HMGB3P2-201ENST00000411913 RAP2AP10114 183 aa3.4□□□□□ -1.87
HMGB3P2-201ENST00000411913 ADSLP30566 484 aaPredicted RBP3.4□□□□□ -1.87
HMGB3P2-201ENST00000411913 GRIA3P42263 894 aa3.4□□□□□ -1.87
HMGB3P2-201ENST00000411913 MAPK10P53779 464 aa3.4□□□□□ -1.87
HMGB3P2-201ENST00000411913 GYS2P54840 703 aa3.4□□□□□ -1.87
HMGB3P2-201ENST00000411913 SSBP2P81877 361 aaPredicted RBP3.4□□□□□ -1.87
HMGB3P2-201ENST00000411913 TRIM25Q14258 630 aaKnown RBP3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms