RNA–Protein interactions for RNA: ENST00000411739.6

NEDD1-202, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 2,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-202ENST00000411739 HSP90AA2PQ14568 343 aaPredicted RBP13.04□□□□□ -0.32
NEDD1-202ENST00000411739 XKR4Q5GH76 650 aa13.04□□□□□ -0.32
NEDD1-202ENST00000411739 CRELD2Q6UXH1 353 aaPredicted RBP13.04□□□□□ -0.32
NEDD1-202ENST00000411739 KIF12Q96FN5 646 aa13.04□□□□□ -0.32
NEDD1-202ENST00000411739 TLE6Q9H808 572 aa13.04□□□□□ -0.32
NEDD1-202ENST00000411739 CLDND1Q9NY35 253 aa13.04□□□□□ -0.32
NEDD1-202ENST00000411739 CNTN3Q9P232 1028 aa13.04□□□□□ -0.32
NEDD1-202ENST00000411739 STYXL1Q9Y6J8 313 aa13.04□□□□□ -0.32
NEDD1-202ENST00000411739 VCANP13611 3396 aa13.04□□□□□ -0.32
NEDD1-202ENST00000411739 TTC26A0AVF1 554 aa13.04□□□□□ -0.32
NEDD1-202ENST00000411739 H3BQ06 376 aaPredicted RBP13.04□□□□□ -0.32
NEDD1-202ENST00000411739 SCP2P22307 547 aa13.04□□□□□ -0.32
NEDD1-202ENST00000411739 DLX2Q07687 328 aaPredicted RBP13.04□□□□□ -0.32
NEDD1-202ENST00000411739 CLUL1Q15846 466 aa13.04□□□□□ -0.32
NEDD1-202ENST00000411739 SLFN12LQ6IEE8 588 aa13.04□□□□□ -0.32
NEDD1-202ENST00000411739 LLGL2Q6P1M3 1020 aa13.04□□□□□ -0.32
NEDD1-202ENST00000411739 C3orf58Q8NDZ4 430 aa13.04□□□□□ -0.32
NEDD1-202ENST00000411739 ZNF507Q8TCN5 953 aa13.04□□□□□ -0.32
NEDD1-202ENST00000411739 RSPH1Q8WYR4 309 aa13.04□□□□□ -0.32
NEDD1-202ENST00000411739 ZBP1Q9H171 429 aa13.04□□□□□ -0.32
NEDD1-202ENST00000411739 LZTS1Q9Y250 596 aa13.04□□□□□ -0.32
NEDD1-202ENST00000411739 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.03□□□□□ -0.32
NEDD1-202ENST00000411739 TGFB1I1O43294 461 aa13.03□□□□□ -0.32
NEDD1-202ENST00000411739 KCNA5P22460 613 aa13.03□□□□□ -0.32
NEDD1-202ENST00000411739 ABCD1P33897 745 aa13.03□□□□□ -0.32
NEDD1-202ENST00000411739 BRCC3P46736 316 aa13.03□□□□□ -0.32
NEDD1-202ENST00000411739 PPP2R3AQ06190 1150 aa13.03□□□□□ -0.32
NEDD1-202ENST00000411739 ALCAMQ13740 583 aa13.03□□□□□ -0.32
NEDD1-202ENST00000411739 POSTNQ15063 836 aa13.03□□□□□ -0.32
NEDD1-202ENST00000411739 ISM2Q6H9L7 571 aa13.03□□□□□ -0.32
NEDD1-202ENST00000411739 JADE1Q6IE81 842 aa13.03□□□□□ -0.32
NEDD1-202ENST00000411739 ARMCX5Q6P1M9 558 aa13.03□□□□□ -0.32
NEDD1-202ENST00000411739 CEP57Q86XR8 500 aa13.03□□□□□ -0.32
NEDD1-202ENST00000411739 SMYD4Q8IYR2 804 aaPredicted RBP13.03□□□□□ -0.32
NEDD1-202ENST00000411739 RDH13Q8NBN7 331 aa13.03□□□□□ -0.32
NEDD1-202ENST00000411739 TMEM206Q9H813 350 aa13.03□□□□□ -0.32
NEDD1-202ENST00000411739 ADAM28Q9UKQ2 775 aa13.03□□□□□ -0.32
NEDD1-202ENST00000411739 CITO14578 2027 aa13.03□□□□□ -0.32
NEDD1-202ENST00000411739 C2orf71A6NGG8 1288 aa13.03□□□□□ -0.32
NEDD1-202ENST00000411739 B3GAT3O94766 335 aa13.03□□□□□ -0.32
NEDD1-202ENST00000411739 NFICP08651 508 aa13.03□□□□□ -0.32
NEDD1-202ENST00000411739 KCNE1P15382 129 aa13.03□□□□□ -0.32
NEDD1-202ENST00000411739 FUT10Q6P4F1 479 aa13.03□□□□□ -0.32
NEDD1-202ENST00000411739 CD300LGQ6UXG3 332 aa13.03□□□□□ -0.32
NEDD1-202ENST00000411739 STXBP4Q6ZWJ1 553 aa13.03□□□□□ -0.32
NEDD1-202ENST00000411739 GLYCTKQ8IVS8 523 aa13.03□□□□□ -0.32
NEDD1-202ENST00000411739 MRPL43Q8N983 215 aaKnown RBP13.03□□□□□ -0.32
NEDD1-202ENST00000411739 HLA-CQ95604 372 aa13.03□□□□□ -0.32
NEDD1-202ENST00000411739 EIF3DO15371 548 aaKnown RBP eCLIP13.02□□□□□ -0.32
NEDD1-202ENST00000411739 CYP2J2P51589 502 aa13.02□□□□□ -0.32
NEDD1-202ENST00000411739 UPP1Q16831 310 aa13.02□□□□□ -0.32
NEDD1-202ENST00000411739 SCARA3Q6AZY7 606 aa13.02□□□□□ -0.32
NEDD1-202ENST00000411739 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.02□□□□□ -0.32
NEDD1-202ENST00000411739 VN1R2Q8NFZ6 395 aa13.02□□□□□ -0.32
NEDD1-202ENST00000411739 PODXLO00592 558 aa13.02□□□□□ -0.33
NEDD1-202ENST00000411739 PPEF2O14830 753 aa13.02□□□□□ -0.33
NEDD1-202ENST00000411739 CTSAP10619 480 aa13.02□□□□□ -0.33
NEDD1-202ENST00000411739 RPL17P18621 184 aaKnown RBP13.02□□□□□ -0.33
NEDD1-202ENST00000411739 KCNQ1P51787 676 aa13.02□□□□□ -0.33
NEDD1-202ENST00000411739 SMC1AQ14683 1233 aaKnown RBP13.02□□□□□ -0.33
NEDD1-202ENST00000411739 FAM171A1Q5VUB5 890 aa13.02□□□□□ -0.33
NEDD1-202ENST00000411739 APOL5Q9BWW9 433 aa13.02□□□□□ -0.33
NEDD1-202ENST00000411739 UBE2ZQ9H832 354 aaPredicted RBP13.02□□□□□ -0.33
NEDD1-202ENST00000411739 NGRNQ9NPE2 291 aaKnown RBP13.02□□□□□ -0.33
NEDD1-202ENST00000411739 AGPAT3Q9NRZ7 376 aa13.02□□□□□ -0.33
NEDD1-202ENST00000411739 SOD2P04179 222 aa13.01□□□□□ -0.33
NEDD1-202ENST00000411739 LTBRP36941 435 aa13.01□□□□□ -0.33
NEDD1-202ENST00000411739 PTPN14Q15678 1187 aa13.01□□□□□ -0.33
NEDD1-202ENST00000411739 LMBRD2Q68DH5 695 aaPredicted RBP13.01□□□□□ -0.33
NEDD1-202ENST00000411739 KIAA1841Q6NSI8 718 aa13.01□□□□□ -0.33
NEDD1-202ENST00000411739 PRSS55Q6UWB4 352 aaPredicted RBP13.01□□□□□ -0.33
NEDD1-202ENST00000411739 CBWD2Q8IUF1 395 aa13.01□□□□□ -0.33
NEDD1-202ENST00000411739 PLEKHA5Q9HAU0 1116 aa13.01□□□□□ -0.33
NEDD1-202ENST00000411739 HSPBP1Q9NZL4 362 aa13.01□□□□□ -0.33
NEDD1-202ENST00000411739 BARX2Q9UMQ3 279 aaPredicted RBP13.01□□□□□ -0.33
NEDD1-202ENST00000411739 GARTP22102 1010 aa13.01□□□□□ -0.33
NEDD1-202ENST00000411739 KNOP1Q1ED39 458 aaKnown RBP13.01□□□□□ -0.33
NEDD1-202ENST00000411739 RTP2Q5QGT7 225 aa13.01□□□□□ -0.33
NEDD1-202ENST00000411739 DCLRE1AQ6PJP8 1040 aa13.01□□□□□ -0.33
NEDD1-202ENST00000411739 TMEM87AQ8NBN3 555 aa13.01□□□□□ -0.33
NEDD1-202ENST00000411739 RIN2Q8WYP3 895 aaPredicted RBP13.01□□□□□ -0.33
NEDD1-202ENST00000411739 PDE11AQ9HCR9 933 aa13.01□□□□□ -0.33
NEDD1-202ENST00000411739 SLC38A7Q9NVC3 462 aa13.01□□□□□ -0.33
NEDD1-202ENST00000411739 THEGQ9P2T0 379 aa13.01□□□□□ -0.33
NEDD1-202ENST00000411739 PCDHA5Q9Y5H7 936 aa13.01□□□□□ -0.33
NEDD1-202ENST00000411739 EXTL3O43909 919 aa13□□□□□ -0.33
NEDD1-202ENST00000411739 KINO60870 393 aaKnown RBP13□□□□□ -0.33
NEDD1-202ENST00000411739 TBX10O75333 385 aa13□□□□□ -0.33
NEDD1-202ENST00000411739 RHOBTB3O94955 611 aa13□□□□□ -0.33
NEDD1-202ENST00000411739 GLP2RO95838 553 aa13□□□□□ -0.33
NEDD1-202ENST00000411739 EFEMP2O95967 443 aa13□□□□□ -0.33
NEDD1-202ENST00000411739 MYL1P05976 194 aa13□□□□□ -0.33
NEDD1-202ENST00000411739 CNPP09543 421 aaKnown RBP13□□□□□ -0.33
NEDD1-202ENST00000411739 ADAM15Q13444 863 aa13□□□□□ -0.33
NEDD1-202ENST00000411739 ZBTB6Q15916 424 aa13□□□□□ -0.33
NEDD1-202ENST00000411739 CAMK4Q16566 473 aa13□□□□□ -0.33
NEDD1-202ENST00000411739 KYAT1Q16773 422 aa13□□□□□ -0.33
NEDD1-202ENST00000411739 DUSP6Q16828 381 aa13□□□□□ -0.33
NEDD1-202ENST00000411739 KANK3Q6NY19 840 aa13□□□□□ -0.33
NEDD1-202ENST00000411739 EFCAB13Q8IY85 973 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms