RNA–Protein interactions for RNA: ENST00000410044.5

LSM5-207, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-207ENST00000410044 LRRIQ3A6PVS8 624 aaPredicted RBP16.49■□□□□ 0.23
LSM5-207ENST00000410044 PMM2O15305 246 aa16.49■□□□□ 0.23
LSM5-207ENST00000410044 THP07101 528 aa16.49■□□□□ 0.23
LSM5-207ENST00000410044 PRKCSHP14314 528 aaPredicted RBP16.49■□□□□ 0.23
LSM5-207ENST00000410044 ATP2A2P16615 1042 aaKnown RBP16.49■□□□□ 0.23
LSM5-207ENST00000410044 GTF2H1P32780 548 aa16.49■□□□□ 0.23
LSM5-207ENST00000410044 DLG4P78352 724 aa16.49■□□□□ 0.23
LSM5-207ENST00000410044 GRIK3Q13003 919 aa16.49■□□□□ 0.23
LSM5-207ENST00000410044 JADE1Q6IE81 842 aa16.49■□□□□ 0.23
LSM5-207ENST00000410044 EFCAB13Q8IY85 973 aa16.49■□□□□ 0.23
LSM5-207ENST00000410044 CMTR2Q8IYT2 770 aaKnown RBP16.49■□□□□ 0.23
LSM5-207ENST00000410044 ABI1Q8IZP0 508 aa16.49■□□□□ 0.23
LSM5-207ENST00000410044 URGCPQ8TCY9 931 aa16.49■□□□□ 0.23
LSM5-207ENST00000410044 CACTINQ8WUQ7 758 aaKnown RBP16.49■□□□□ 0.23
LSM5-207ENST00000410044 ZNF516Q92618 1163 aa16.49■□□□□ 0.23
LSM5-207ENST00000410044 SLC35C1Q96A29 364 aa16.49■□□□□ 0.23
LSM5-207ENST00000410044 FAM212AQ96EL1 285 aa16.49■□□□□ 0.23
LSM5-207ENST00000410044 RNPC3Q96LT9 517 aaKnown RBP16.49■□□□□ 0.23
LSM5-207ENST00000410044 FNBP1Q96RU3 617 aa16.49■□□□□ 0.23
LSM5-207ENST00000410044 RPS6KC1Q96S38 1066 aa16.49■□□□□ 0.23
LSM5-207ENST00000410044 RAD9AQ99638 391 aa16.49■□□□□ 0.23
LSM5-207ENST00000410044 MRPL9Q9BYD2 267 aaKnown RBP16.49■□□□□ 0.23
LSM5-207ENST00000410044 SLC38A7Q9NVC3 462 aa16.49■□□□□ 0.23
LSM5-207ENST00000410044 INTS13Q9NVM9 706 aa16.49■□□□□ 0.23
LSM5-207ENST00000410044 MAGEC2Q9UBF1 373 aaPredicted RBP16.49■□□□□ 0.23
LSM5-207ENST00000410044 LIMA1Q9UHB6 759 aaKnown RBP16.49■□□□□ 0.23
LSM5-207ENST00000410044 UBQLN1Q9UMX0 589 aaKnown RBP16.49■□□□□ 0.23
LSM5-207ENST00000410044 INSL6Q9Y581 213 aa16.49■□□□□ 0.23
LSM5-207ENST00000410044 KCNJ18B7U540 433 aa16.48■□□□□ 0.23
LSM5-207ENST00000410044 XPOTO43592 962 aaKnown RBP16.48■□□□□ 0.23
LSM5-207ENST00000410044 STX10O60499 249 aa16.48■□□□□ 0.23
LSM5-207ENST00000410044 C4BPAP04003 597 aaKnown RBP16.48■□□□□ 0.23
LSM5-207ENST00000410044 SCNN1GP51170 649 aa16.48■□□□□ 0.23
LSM5-207ENST00000410044 DSC1Q08554 894 aa16.48■□□□□ 0.23
LSM5-207ENST00000410044 KCNJ12Q14500 433 aa16.48■□□□□ 0.23
LSM5-207ENST00000410044 TMEM132DQ14C87 1099 aa16.48■□□□□ 0.23
LSM5-207ENST00000410044 DUOXA2Q1HG44 320 aa16.48■□□□□ 0.23
LSM5-207ENST00000410044 C15orf39Q6ZRI6 1047 aa16.48■□□□□ 0.23
LSM5-207ENST00000410044 SP7Q8TDD2 431 aaPredicted RBP16.48■□□□□ 0.23
LSM5-207ENST00000410044 CCDC127Q96BQ5 260 aa16.48■□□□□ 0.23
LSM5-207ENST00000410044 KIF12Q96FN5 646 aa16.48■□□□□ 0.23
LSM5-207ENST00000410044 POP1Q99575 1024 aaKnown RBP16.48■□□□□ 0.23
LSM5-207ENST00000410044 TBC1D13Q9NVG8 400 aa16.48■□□□□ 0.23
LSM5-207ENST00000410044 PLAGL2Q9UPG8 496 aa16.48■□□□□ 0.23
LSM5-207ENST00000410044 TBKBP1A7MCY6 615 aa16.47■□□□□ 0.23
LSM5-207ENST00000410044 GOLGA6L19H0YKK7 550 aa16.47■□□□□ 0.23
LSM5-207ENST00000410044 NFICP08651 508 aa16.47■□□□□ 0.23
LSM5-207ENST00000410044 TNNI1P19237 187 aa16.47■□□□□ 0.23
LSM5-207ENST00000410044 LRPAP1P30533 357 aa16.47■□□□□ 0.23
LSM5-207ENST00000410044 GATMP50440 423 aa16.47■□□□□ 0.23
LSM5-207ENST00000410044 TPM4P67936 248 aa16.47■□□□□ 0.23
LSM5-207ENST00000410044 MAN2A1Q16706 1144 aa16.47■□□□□ 0.23
LSM5-207ENST00000410044 APTXQ7Z2E3 356 aaKnown RBP16.47■□□□□ 0.23
LSM5-207ENST00000410044 TMCO2Q7Z6W1 182 aaPredicted RBP16.47■□□□□ 0.23
LSM5-207ENST00000410044 TUBGCP2Q9BSJ2 902 aa16.47■□□□□ 0.23
LSM5-207ENST00000410044 RBSNQ9H1K0 784 aa16.47■□□□□ 0.23
LSM5-207ENST00000410044 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.47■□□□□ 0.23
LSM5-207ENST00000410044 PTPRJQ12913 1337 aa16.46■□□□□ 0.23
LSM5-207ENST00000410044 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.46■□□□□ 0.23
LSM5-207ENST00000410044 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.46■□□□□ 0.23
LSM5-207ENST00000410044 ANO9A1A5B4 782 aa16.46■□□□□ 0.23
LSM5-207ENST00000410044 DDHD2O94830 711 aa16.46■□□□□ 0.23
LSM5-207ENST00000410044 POMCP01189 267 aa16.46■□□□□ 0.23
LSM5-207ENST00000410044 DLATP10515 647 aaKnown RBP16.46■□□□□ 0.23
LSM5-207ENST00000410044 CDK11BP21127 795 aaKnown RBP16.46■□□□□ 0.23
LSM5-207ENST00000410044 IBSPP21815 317 aaPredicted RBP16.46■□□□□ 0.23
LSM5-207ENST00000410044 RPL9P32969 192 aaKnown RBP16.46■□□□□ 0.23
LSM5-207ENST00000410044 MTIF2P46199 727 aaKnown RBP16.46■□□□□ 0.23
LSM5-207ENST00000410044 SOX4Q06945 474 aaPredicted RBP16.46■□□□□ 0.23
LSM5-207ENST00000410044 PPP3CAQ08209 521 aa16.46■□□□□ 0.23
LSM5-207ENST00000410044 KCNH2Q12809 1159 aa16.46■□□□□ 0.23
LSM5-207ENST00000410044 TUSC3Q13454 348 aa16.46■□□□□ 0.23
LSM5-207ENST00000410044 ZACNQ401N2 412 aa16.46■□□□□ 0.23
LSM5-207ENST00000410044 GLRA4Q5JXX5 417 aa16.46■□□□□ 0.23
LSM5-207ENST00000410044 SV2AQ7L0J3 742 aa16.46■□□□□ 0.23
LSM5-207ENST00000410044 COLGALT2Q8IYK4 626 aa16.46■□□□□ 0.23
LSM5-207ENST00000410044 TDHQ8IZJ6 230 aa16.46■□□□□ 0.23
LSM5-207ENST00000410044 LRRC43Q8N309 656 aa16.46■□□□□ 0.23
LSM5-207ENST00000410044 BEST2Q8NFU1 509 aa16.46■□□□□ 0.23
LSM5-207ENST00000410044 OR5B17Q8NGF7 314 aa16.46■□□□□ 0.23
LSM5-207ENST00000410044 CXorf38Q8TB03 319 aa16.46■□□□□ 0.23
LSM5-207ENST00000410044 ANKRD36BP1Q96IX9 119 aa16.46■□□□□ 0.23
LSM5-207ENST00000410044 TMEM175Q9BSA9 504 aa16.46■□□□□ 0.23
LSM5-207ENST00000410044 ZBED2Q9BTP6 218 aa16.46■□□□□ 0.23
LSM5-207ENST00000410044 CWH43Q9H720 699 aa16.46■□□□□ 0.23
LSM5-207ENST00000410044 NRDE2Q9H7Z3 1164 aa16.46■□□□□ 0.23
LSM5-207ENST00000410044 TMEM8AQ9HCN3 771 aa16.46■□□□□ 0.23
LSM5-207ENST00000410044 DPP3Q9NY33 737 aa16.46■□□□□ 0.23
LSM5-207ENST00000410044 INPP5FQ9Y2H2 1132 aa16.46■□□□□ 0.23
LSM5-207ENST00000410044 COQ4Q9Y3A0 265 aa16.46■□□□□ 0.23
LSM5-207ENST00000410044 CEP290O15078 2479 aa16.45■□□□□ 0.22
LSM5-207ENST00000410044 A0A1W2PPC1 479 aa16.45■□□□□ 0.22
LSM5-207ENST00000410044 CARNS1A5YM72 827 aa16.45■□□□□ 0.22
LSM5-207ENST00000410044 P4HA2O15460 535 aa16.45■□□□□ 0.22
LSM5-207ENST00000410044 TRIM49P0CI25 452 aa16.45■□□□□ 0.22
LSM5-207ENST00000410044 TRIM49CP0CI26 452 aa16.45■□□□□ 0.22
LSM5-207ENST00000410044 ATP1A3P13637 1013 aa16.45■□□□□ 0.22
LSM5-207ENST00000410044 TFAMQ00059 246 aaKnown RBP16.45■□□□□ 0.22
LSM5-207ENST00000410044 KRT31Q15323 416 aa16.45■□□□□ 0.22
LSM5-207ENST00000410044 VWA3BQ502W6 1294 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 132.9 ms