RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 UBE2HP62256 183 aa11.86□□□□□ -0.51
CHMP3-205ENST00000409810 DPYDQ12882 1025 aa11.86□□□□□ -0.51
CHMP3-205ENST00000409810 KCNB1Q14721 858 aa11.86□□□□□ -0.51
CHMP3-205ENST00000409810 NAB2Q15742 525 aa11.86□□□□□ -0.51
CHMP3-205ENST00000409810 ENOX2Q16206 610 aaKnown RBP11.86□□□□□ -0.51
CHMP3-205ENST00000409810 AAK1Q2M2I8 961 aa11.86□□□□□ -0.51
CHMP3-205ENST00000409810 GOLGA5Q8TBA6 731 aa11.86□□□□□ -0.51
CHMP3-205ENST00000409810 BCL7CQ8WUZ0 217 aaPredicted RBP11.86□□□□□ -0.51
CHMP3-205ENST00000409810 SCFD1Q8WVM8 642 aa11.86□□□□□ -0.51
CHMP3-205ENST00000409810 PABPC5Q96DU9 382 aaKnown RBP11.86□□□□□ -0.51
CHMP3-205ENST00000409810 FAM212AQ96EL1 285 aa11.86□□□□□ -0.51
CHMP3-205ENST00000409810 KIF12Q96FN5 646 aa11.86□□□□□ -0.51
CHMP3-205ENST00000409810 EMILIN2Q9BXX0 1053 aa11.86□□□□□ -0.51
CHMP3-205ENST00000409810 ASB7Q9H672 318 aa11.86□□□□□ -0.51
CHMP3-205ENST00000409810 MRPL17Q9NRX2 175 aaKnown RBP11.86□□□□□ -0.51
CHMP3-205ENST00000409810 RMND1Q9NWS8 449 aa11.86□□□□□ -0.51
CHMP3-205ENST00000409810 UBQLN1Q9UMX0 589 aaKnown RBP11.86□□□□□ -0.51
CHMP3-205ENST00000409810 DERAQ9Y315 318 aa11.86□□□□□ -0.51
CHMP3-205ENST00000409810 IRAK3Q9Y616 596 aa11.86□□□□□ -0.51
CHMP3-205ENST00000409810 C2orf71A6NGG8 1288 aa11.85□□□□□ -0.51
CHMP3-205ENST00000409810 LACTBL1A8MY62 500 aa11.85□□□□□ -0.51
CHMP3-205ENST00000409810 PODXLO00592 558 aa11.85□□□□□ -0.51
CHMP3-205ENST00000409810 TRAPPC3O43617 180 aa11.85□□□□□ -0.51
CHMP3-205ENST00000409810 EXTL3O43909 919 aa11.85□□□□□ -0.51
CHMP3-205ENST00000409810 B3GAT3O94766 335 aa11.85□□□□□ -0.51
CHMP3-205ENST00000409810 RHOBTB3O94955 611 aa11.85□□□□□ -0.51
CHMP3-205ENST00000409810 KIF4AO95239 1232 aa11.85□□□□□ -0.51
CHMP3-205ENST00000409810 SMC2O95347 1197 aa11.85□□□□□ -0.51
CHMP3-205ENST00000409810 CXCL14O95715 111 aa11.85□□□□□ -0.51
CHMP3-205ENST00000409810 ADRB2P07550 413 aa11.85□□□□□ -0.51
CHMP3-205ENST00000409810 PRR29P0C7W0 189 aa11.85□□□□□ -0.51
CHMP3-205ENST00000409810 CYP3A5P20815 502 aa11.85□□□□□ -0.51
CHMP3-205ENST00000409810 ADSSP30520 456 aa11.85□□□□□ -0.51
CHMP3-205ENST00000409810 NRIP1P48552 1158 aa11.85□□□□□ -0.51
CHMP3-205ENST00000409810 GLUD2P49448 558 aa11.85□□□□□ -0.51
CHMP3-205ENST00000409810 CLCNKBP51801 687 aa11.85□□□□□ -0.51
CHMP3-205ENST00000409810 CREMQ03060 361 aa11.85□□□□□ -0.51
CHMP3-205ENST00000409810 SNW1Q13573 536 aaKnown RBP11.85□□□□□ -0.51
CHMP3-205ENST00000409810 DUSP6Q16828 381 aa11.85□□□□□ -0.51
CHMP3-205ENST00000409810 UPP1Q16831 310 aa11.85□□□□□ -0.51
CHMP3-205ENST00000409810 KNOP1Q1ED39 458 aaKnown RBP11.85□□□□□ -0.51
CHMP3-205ENST00000409810 USP41Q3LFD5 358 aa11.85□□□□□ -0.51
CHMP3-205ENST00000409810 ZBTB41Q5SVQ8 909 aa11.85□□□□□ -0.51
CHMP3-205ENST00000409810 KIAA1841Q6NSI8 718 aa11.85□□□□□ -0.51
CHMP3-205ENST00000409810 PDXDC1Q6P996 788 aa11.85□□□□□ -0.51
CHMP3-205ENST00000409810 DCLRE1AQ6PJP8 1040 aa11.85□□□□□ -0.51
CHMP3-205ENST00000409810 EP400NLQ6ZTU2 488 aa11.85□□□□□ -0.51
CHMP3-205ENST00000409810 ADGRD2Q7Z7M1 963 aa11.85□□□□□ -0.51
CHMP3-205ENST00000409810 NT5DC4Q86YG4 428 aa11.85□□□□□ -0.51
CHMP3-205ENST00000409810 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.85□□□□□ -0.51
CHMP3-205ENST00000409810 NELFCDQ8IXH7 590 aa11.85□□□□□ -0.51
CHMP3-205ENST00000409810 ELOA2Q8IYF1 753 aaPredicted RBP11.85□□□□□ -0.51
CHMP3-205ENST00000409810 GPR65Q8IYL9 337 aa11.85□□□□□ -0.51
CHMP3-205ENST00000409810 GPD1LQ8N335 351 aa11.85□□□□□ -0.51
CHMP3-205ENST00000409810 EFHBQ8N7U6 833 aa11.85□□□□□ -0.51
CHMP3-205ENST00000409810 MRPL43Q8N983 215 aaKnown RBP11.85□□□□□ -0.51
CHMP3-205ENST00000409810 KIAA0895Q8NCT3 520 aa11.85□□□□□ -0.51
CHMP3-205ENST00000409810 GLIS3Q8NEA6 775 aa11.85□□□□□ -0.51
CHMP3-205ENST00000409810 ENGASEQ8NFI3 743 aa11.85□□□□□ -0.51
CHMP3-205ENST00000409810 BEST2Q8NFU1 509 aa11.85□□□□□ -0.51
CHMP3-205ENST00000409810 NOC3LQ8WTT2 800 aaKnown RBP11.85□□□□□ -0.51
CHMP3-205ENST00000409810 ATXN2LQ8WWM7 1075 aaKnown RBP11.85□□□□□ -0.51
CHMP3-205ENST00000409810 ZMAT2Q96NC0 199 aaKnown RBP11.85□□□□□ -0.51
CHMP3-205ENST00000409810 CBWD1Q9BRT8 395 aa11.85□□□□□ -0.51
CHMP3-205ENST00000409810 FAM213AQ9BRX8 229 aa11.85□□□□□ -0.51
CHMP3-205ENST00000409810 GTPBP4Q9BZE4 634 aaKnown RBP11.85□□□□□ -0.51
CHMP3-205ENST00000409810 CXCL16Q9H2A7 254 aa11.85□□□□□ -0.51
CHMP3-205ENST00000409810 IGFLR1Q9H665 355 aa11.85□□□□□ -0.51
CHMP3-205ENST00000409810 UBE2ZQ9H832 354 aaPredicted RBP11.85□□□□□ -0.51
CHMP3-205ENST00000409810 KIAA1586Q9HCI6 787 aa11.85□□□□□ -0.51
CHMP3-205ENST00000409810 TSHZ2Q9NRE2 1034 aa11.85□□□□□ -0.51
CHMP3-205ENST00000409810 CLDND1Q9NY35 253 aa11.85□□□□□ -0.51
CHMP3-205ENST00000409810 C2CD2Q9Y426 696 aa11.85□□□□□ -0.51
CHMP3-205ENST00000409810 MTCL1Q9Y4B5 1905 aaKnown RBP11.85□□□□□ -0.51
CHMP3-205ENST00000409810 UNC80Q8N2C7 3258 aa11.84□□□□□ -0.51
CHMP3-205ENST00000409810 DSG1Q02413 1049 aa11.84□□□□□ -0.51
CHMP3-205ENST00000409810 HYAL1Q12794 435 aa11.84□□□□□ -0.51
CHMP3-205ENST00000409810 STK4Q13043 487 aa11.84□□□□□ -0.51
CHMP3-205ENST00000409810 COL19A1Q14993 1142 aa11.84□□□□□ -0.51
CHMP3-205ENST00000409810 TMEM132DQ14C87 1099 aa11.84□□□□□ -0.51
CHMP3-205ENST00000409810 SURF1Q15526 300 aa11.84□□□□□ -0.51
CHMP3-205ENST00000409810 PTPN14Q15678 1187 aa11.84□□□□□ -0.51
CHMP3-205ENST00000409810 RBM23Q86U06 439 aaKnown RBP11.84□□□□□ -0.51
CHMP3-205ENST00000409810 PPFIBP1Q86W92 1011 aa11.84□□□□□ -0.51
CHMP3-205ENST00000409810 BRSK2Q8IWQ3 736 aa11.84□□□□□ -0.51
CHMP3-205ENST00000409810 RNF168Q8IYW5 571 aaPredicted RBP11.84□□□□□ -0.51
CHMP3-205ENST00000409810 HASPINQ8TF76 798 aa11.84□□□□□ -0.51
CHMP3-205ENST00000409810 SAAL1Q96ER3 474 aa11.84□□□□□ -0.51
CHMP3-205ENST00000409810 GBP4Q96PP9 640 aa11.84□□□□□ -0.51
CHMP3-205ENST00000409810 PAAF1Q9BRP4 392 aa11.84□□□□□ -0.51
CHMP3-205ENST00000409810 VN1R3Q9BXE9 311 aa11.84□□□□□ -0.51
CHMP3-205ENST00000409810 GOLGA2P5Q9HBQ8 144 aa11.84□□□□□ -0.51
CHMP3-205ENST00000409810 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.84□□□□□ -0.51
CHMP3-205ENST00000409810 AGPAT3Q9NRZ7 376 aa11.84□□□□□ -0.51
CHMP3-205ENST00000409810 RBAKQ9NYW8 714 aaPredicted RBP11.84□□□□□ -0.51
CHMP3-205ENST00000409810 HSPBP1Q9NZL4 362 aa11.84□□□□□ -0.51
CHMP3-205ENST00000409810 NUB1Q9Y5A7 615 aa11.84□□□□□ -0.51
CHMP3-205ENST00000409810 PCDHGC5Q9Y5F6 944 aa11.84□□□□□ -0.51
CHMP3-205ENST00000409810 SPTBN5Q9NRC6 3674 aaKnown RBP11.84□□□□□ -0.51
CHMP3-205ENST00000409810 SCN1AP35498 2009 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms