RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 ACAP3Q96P50 834 aa13.44□□□□□ -0.26
CHMP3-204ENST00000409727 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.44□□□□□ -0.26
CHMP3-204ENST00000409727 RNF208Q9H0X6 261 aa13.44□□□□□ -0.26
CHMP3-204ENST00000409727 HAUS4Q9H6D7 363 aa13.44□□□□□ -0.26
CHMP3-204ENST00000409727 AIPL1Q9NZN9 384 aa13.44□□□□□ -0.26
CHMP3-204ENST00000409727 AKR1B10O60218 316 aa13.44□□□□□ -0.26
CHMP3-204ENST00000409727 SERPING1P05155 500 aa13.44□□□□□ -0.26
CHMP3-204ENST00000409727 TMEM191BP0C7N4 346 aa13.44□□□□□ -0.26
CHMP3-204ENST00000409727 CYLC1P35663 651 aaPredicted RBP13.44□□□□□ -0.26
CHMP3-204ENST00000409727 SOX5P35711 763 aa13.44□□□□□ -0.26
CHMP3-204ENST00000409727 STAT1P42224 750 aa13.44□□□□□ -0.26
CHMP3-204ENST00000409727 KIF11P52732 1056 aa13.44□□□□□ -0.26
CHMP3-204ENST00000409727 CDK17Q00537 523 aa13.44□□□□□ -0.26
CHMP3-204ENST00000409727 DUOXA2Q1HG44 320 aa13.44□□□□□ -0.26
CHMP3-204ENST00000409727 SLC10A6Q3KNW5 377 aa13.44□□□□□ -0.26
CHMP3-204ENST00000409727 DCAF4L1Q3SXM0 396 aa13.44□□□□□ -0.26
CHMP3-204ENST00000409727 WDR44Q5JSH3 913 aa13.44□□□□□ -0.26
CHMP3-204ENST00000409727 JADE1Q6IE81 842 aa13.44□□□□□ -0.26
CHMP3-204ENST00000409727 FAM228AQ86W67 206 aa13.44□□□□□ -0.26
CHMP3-204ENST00000409727 REXO1L1PQ8IX06 675 aa13.44□□□□□ -0.26
CHMP3-204ENST00000409727 TSEN34Q9BSV6 310 aaKnown RBP13.44□□□□□ -0.26
CHMP3-204ENST00000409727 GPR88Q9GZN0 384 aa13.44□□□□□ -0.26
CHMP3-204ENST00000409727 TRPV6Q9H1D0 765 aa13.44□□□□□ -0.26
CHMP3-204ENST00000409727 NXF3Q9H4D5 531 aaKnown RBP13.44□□□□□ -0.26
CHMP3-204ENST00000409727 LZTFL1Q9NQ48 299 aa13.44□□□□□ -0.26
CHMP3-204ENST00000409727 C1orf112Q9NSG2 853 aa13.44□□□□□ -0.26
CHMP3-204ENST00000409727 SNTG2Q9NY99 539 aa13.44□□□□□ -0.26
CHMP3-204ENST00000409727 TFR2Q9UP52 801 aa13.44□□□□□ -0.26
CHMP3-204ENST00000409727 FRMPD3Q5JV73 1810 aa13.43□□□□□ -0.26
CHMP3-204ENST00000409727 FAM170AA1A519 330 aa13.43□□□□□ -0.26
CHMP3-204ENST00000409727 FOXN3O00409 490 aaPredicted RBP13.43□□□□□ -0.26
CHMP3-204ENST00000409727 CCP110O43303 1012 aa13.43□□□□□ -0.26
CHMP3-204ENST00000409727 RPS6KA5O75582 802 aa13.43□□□□□ -0.26
CHMP3-204ENST00000409727 IL18RAPO95256 599 aa13.43□□□□□ -0.26
CHMP3-204ENST00000409727 CCL5P13501 91 aa13.43□□□□□ -0.26
CHMP3-204ENST00000409727 CLCN1P35523 988 aa13.43□□□□□ -0.26
CHMP3-204ENST00000409727 GFPT1Q06210 699 aaPredicted RBP13.43□□□□□ -0.26
CHMP3-204ENST00000409727 NCOA4Q13772 614 aa13.43□□□□□ -0.26
CHMP3-204ENST00000409727 PCBP1Q15365 356 aaKnown RBP eCLIP13.43□□□□□ -0.26
CHMP3-204ENST00000409727 SURF1Q15526 300 aa13.43□□□□□ -0.26
CHMP3-204ENST00000409727 TRAPPC11Q7Z392 1133 aa13.43□□□□□ -0.26
CHMP3-204ENST00000409727 IRF2BP2Q7Z5L9 587 aa13.43□□□□□ -0.26
CHMP3-204ENST00000409727 HELQQ8TDG4 1101 aa13.43□□□□□ -0.26
CHMP3-204ENST00000409727 KREMEN1Q96MU8 473 aa13.43□□□□□ -0.26
CHMP3-204ENST00000409727 CCDC94Q9BW85 323 aaPredicted RBP13.43□□□□□ -0.26
CHMP3-204ENST00000409727 OSBPL7Q9BZF2 842 aa13.43□□□□□ -0.26
CHMP3-204ENST00000409727 SENP6Q9GZR1 1112 aaPredicted RBP13.43□□□□□ -0.26
CHMP3-204ENST00000409727 RNF19AQ9NV58 838 aa13.43□□□□□ -0.26
CHMP3-204ENST00000409727 REXO2Q9Y3B8 237 aaKnown RBP13.43□□□□□ -0.26
CHMP3-204ENST00000409727 EVI5O60447 810 aa13.42□□□□□ -0.26
CHMP3-204ENST00000409727 B4GALT4O60513 344 aa13.42□□□□□ -0.26
CHMP3-204ENST00000409727 OFD1O75665 1012 aa13.42□□□□□ -0.26
CHMP3-204ENST00000409727 IPO7O95373 1038 aaKnown RBP13.42□□□□□ -0.26
CHMP3-204ENST00000409727 CST3P01034 146 aaPredicted RBP13.42□□□□□ -0.26
CHMP3-204ENST00000409727 TNNC2P02585 160 aa13.42□□□□□ -0.26
CHMP3-204ENST00000409727 KRT19P08727 400 aa13.42□□□□□ -0.26
CHMP3-204ENST00000409727 RFX1P22670 979 aa13.42□□□□□ -0.26
CHMP3-204ENST00000409727 AKAP5P24588 427 aa13.42□□□□□ -0.26
CHMP3-204ENST00000409727 MFAP3P55082 362 aa13.42□□□□□ -0.26
CHMP3-204ENST00000409727 PTK2Q05397 1052 aa13.42□□□□□ -0.26
CHMP3-204ENST00000409727 PTPN14Q15678 1187 aa13.42□□□□□ -0.26
CHMP3-204ENST00000409727 TWF2Q6IBS0 349 aaKnown RBP13.42□□□□□ -0.26
CHMP3-204ENST00000409727 APBB1IPQ7Z5R6 666 aaPredicted RBP13.42□□□□□ -0.26
CHMP3-204ENST00000409727 CCDC170Q8IYT3 715 aa13.42□□□□□ -0.26
CHMP3-204ENST00000409727 DHX38Q92620 1227 aaKnown RBP13.42□□□□□ -0.26
CHMP3-204ENST00000409727 ANKRD36BP1Q96IX9 119 aa13.42□□□□□ -0.26
CHMP3-204ENST00000409727 ARID3AQ99856 593 aa13.42□□□□□ -0.26
CHMP3-204ENST00000409727 CXCL16Q9H2A7 254 aa13.42□□□□□ -0.26
CHMP3-204ENST00000409727 KCND1Q9NSA2 647 aa13.42□□□□□ -0.26
CHMP3-204ENST00000409727 MYO6Q9UM54 1294 aa13.42□□□□□ -0.26
CHMP3-204ENST00000409727 ST3GAL5Q9UNP4 418 aa13.42□□□□□ -0.26
CHMP3-204ENST00000409727 MROH7Q68CQ1 1323 aa13.42□□□□□ -0.26
CHMP3-204ENST00000409727 A0A0U1RQG5 324 aaPredicted RBP13.42□□□□□ -0.26
CHMP3-204ENST00000409727 ZNF263O14978 683 aa13.42□□□□□ -0.26
CHMP3-204ENST00000409727 GHRP10912 638 aa13.42□□□□□ -0.26
CHMP3-204ENST00000409727 IBSPP21815 317 aaPredicted RBP13.42□□□□□ -0.26
CHMP3-204ENST00000409727 AXLP30530 894 aa13.42□□□□□ -0.26
CHMP3-204ENST00000409727 GRM5P41594 1212 aa13.42□□□□□ -0.26
CHMP3-204ENST00000409727 AP3M2P53677 418 aa13.42□□□□□ -0.26
CHMP3-204ENST00000409727 MYL6P60660 151 aa13.42□□□□□ -0.26
CHMP3-204ENST00000409727 MGAT3Q09327 533 aa13.42□□□□□ -0.26
CHMP3-204ENST00000409727 PTK7Q13308 1070 aa13.42□□□□□ -0.26
CHMP3-204ENST00000409727 TRPC3Q13507 836 aa13.42□□□□□ -0.26
CHMP3-204ENST00000409727 SPA17Q15506 151 aa13.42□□□□□ -0.26
CHMP3-204ENST00000409727 KYAT1Q16773 422 aa13.42□□□□□ -0.26
CHMP3-204ENST00000409727 ZNF571Q7Z3V5 609 aaPredicted RBP13.42□□□□□ -0.26
CHMP3-204ENST00000409727 KIAA1328Q86T90 577 aa13.42□□□□□ -0.26
CHMP3-204ENST00000409727 ZNF710Q8N1W2 664 aa13.42□□□□□ -0.26
CHMP3-204ENST00000409727 DNAJC5GQ8N7S2 189 aa13.42□□□□□ -0.26
CHMP3-204ENST00000409727 ZNF592Q92610 1267 aa13.42□□□□□ -0.26
CHMP3-204ENST00000409727 PAK6Q9NQU5 681 aaPredicted RBP13.42□□□□□ -0.26
CHMP3-204ENST00000409727 PHF24Q9UPV7 400 aa13.42□□□□□ -0.26
CHMP3-204ENST00000409727 ABL1P00519 1130 aa13.41□□□□□ -0.26
CHMP3-204ENST00000409727 TNNT1P13805 278 aa13.41□□□□□ -0.26
CHMP3-204ENST00000409727 FERP16591 822 aa13.41□□□□□ -0.26
CHMP3-204ENST00000409727 GUCY2FP51841 1108 aa13.41□□□□□ -0.26
CHMP3-204ENST00000409727 YARSP54577 528 aaKnown RBP13.41□□□□□ -0.26
CHMP3-204ENST00000409727 NOP14P78316 857 aaKnown RBP13.41□□□□□ -0.26
CHMP3-204ENST00000409727 TMEM132DQ14C87 1099 aa13.41□□□□□ -0.26
CHMP3-204ENST00000409727 GLRA4Q5JXX5 417 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms