RNA–Protein interactions for RNA: ENST00000409530.5

SHANK2-204, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 2,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-204ENST00000409530 EHBP1Q8NDI1 1231 aa16.91■□□□□ 0.3
SHANK2-204ENST00000409530 KIF12Q96FN5 646 aa16.91■□□□□ 0.3
SHANK2-204ENST00000409530 UBE2TQ9NPD8 197 aaPredicted RBP16.91■□□□□ 0.3
SHANK2-204ENST00000409530 RAB20Q9NX57 234 aa16.91■□□□□ 0.3
SHANK2-204ENST00000409530 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.91■□□□□ 0.3
SHANK2-204ENST00000409530 APEX2Q9UBZ4 518 aa16.91■□□□□ 0.3
SHANK2-204ENST00000409530 DNAJC12Q9UKB3 198 aa16.91■□□□□ 0.3
SHANK2-204ENST00000409530 RALGAPA2Q2PPJ7 1873 aa16.9■□□□□ 0.3
SHANK2-204ENST00000409530 VNN1O95497 513 aa16.9■□□□□ 0.3
SHANK2-204ENST00000409530 USP8P40818 1118 aa16.9■□□□□ 0.3
SHANK2-204ENST00000409530 ZBED6P86452 979 aa16.9■□□□□ 0.3
SHANK2-204ENST00000409530 RPAINQ86UA6 219 aa16.9■□□□□ 0.3
SHANK2-204ENST00000409530 LMO3Q8TAP4 145 aa16.9■□□□□ 0.3
SHANK2-204ENST00000409530 BAP1Q92560 729 aa16.9■□□□□ 0.3
SHANK2-204ENST00000409530 ANKRD36BP1Q96IX9 119 aa16.9■□□□□ 0.3
SHANK2-204ENST00000409530 IFIH1Q9BYX4 1025 aaKnown RBP16.9■□□□□ 0.3
SHANK2-204ENST00000409530 ZKSCAN5Q9Y2L8 839 aa16.9■□□□□ 0.3
SHANK2-204ENST00000409530 PCDHB2Q9Y5E7 798 aa16.9■□□□□ 0.3
SHANK2-204ENST00000409530 TLR3O15455 904 aaKnown RBP16.9■□□□□ 0.3
SHANK2-204ENST00000409530 NRDCO43847 1150 aa16.9■□□□□ 0.3
SHANK2-204ENST00000409530 TNNC2P02585 160 aa16.9■□□□□ 0.3
SHANK2-204ENST00000409530 C4BPAP04003 597 aaKnown RBP16.9■□□□□ 0.3
SHANK2-204ENST00000409530 PLEKP08567 350 aaPredicted RBP16.9■□□□□ 0.3
SHANK2-204ENST00000409530 MSNP26038 577 aaKnown RBP16.9■□□□□ 0.3
SHANK2-204ENST00000409530 HSP90AA2PQ14568 343 aaPredicted RBP16.9■□□□□ 0.3
SHANK2-204ENST00000409530 TMEM132DQ14C87 1099 aa16.9■□□□□ 0.3
SHANK2-204ENST00000409530 PCBP1Q15365 356 aaKnown RBP eCLIP16.9■□□□□ 0.3
SHANK2-204ENST00000409530 ZACNQ401N2 412 aa16.9■□□□□ 0.3
SHANK2-204ENST00000409530 TDRD12Q587J7 1177 aaKnown RBP16.9■□□□□ 0.3
SHANK2-204ENST00000409530 PDXDC1Q6P996 788 aa16.9■□□□□ 0.3
SHANK2-204ENST00000409530 SCARA5Q6ZMJ2 495 aa16.9■□□□□ 0.3
SHANK2-204ENST00000409530 TMEM139Q8IV31 216 aa16.9■□□□□ 0.3
SHANK2-204ENST00000409530 SMG8Q8ND04 991 aaKnown RBP16.9■□□□□ 0.3
SHANK2-204ENST00000409530 OR8K1Q8NGG5 319 aa16.9■□□□□ 0.3
SHANK2-204ENST00000409530 ZFP42Q96MM3 310 aa16.9■□□□□ 0.3
SHANK2-204ENST00000409530 CHP1Q99653 195 aa16.9■□□□□ 0.3
SHANK2-204ENST00000409530 ARID3AQ99856 593 aa16.9■□□□□ 0.3
SHANK2-204ENST00000409530 ADAM2Q99965 735 aa16.9■□□□□ 0.3
SHANK2-204ENST00000409530 DESI2Q9BSY9 194 aa16.9■□□□□ 0.3
SHANK2-204ENST00000409530 TMX1Q9H3N1 280 aa16.9■□□□□ 0.3
SHANK2-204ENST00000409530 ERVK-5Q9HDB9 667 aa16.9■□□□□ 0.3
SHANK2-204ENST00000409530 PRDM5Q9NQX1 630 aaPredicted RBP16.9■□□□□ 0.3
SHANK2-204ENST00000409530 FAM105AQ9NUU6 356 aa16.9■□□□□ 0.3
SHANK2-204ENST00000409530 IL18RAPO95256 599 aa16.89■□□□□ 0.29
SHANK2-204ENST00000409530 ITGB3P05106 788 aa16.89■□□□□ 0.29
SHANK2-204ENST00000409530 RPLP2P05387 115 aaKnown RBP16.89■□□□□ 0.29
SHANK2-204ENST00000409530 SELPP16109 830 aa16.89■□□□□ 0.29
SHANK2-204ENST00000409530 NCOA4Q13772 614 aa16.89■□□□□ 0.29
SHANK2-204ENST00000409530 DPY19L2P1Q6NXN4 242 aa16.89■□□□□ 0.29
SHANK2-204ENST00000409530 TRAF7Q6Q0C0 670 aa16.89■□□□□ 0.29
SHANK2-204ENST00000409530 TRAPPC11Q7Z392 1133 aa16.89■□□□□ 0.29
SHANK2-204ENST00000409530 ZNF710Q8N1W2 664 aa16.89■□□□□ 0.29
SHANK2-204ENST00000409530 TATDN2Q93075 761 aa16.89■□□□□ 0.29
SHANK2-204ENST00000409530 HIPK3Q9H422 1215 aa16.89■□□□□ 0.29
SHANK2-204ENST00000409530 C11orf49Q9H6J7 331 aa16.89■□□□□ 0.29
SHANK2-204ENST00000409530 C1orf112Q9NSG2 853 aa16.89■□□□□ 0.29
SHANK2-204ENST00000409530 TUBGCP4Q9UGJ1 667 aa16.89■□□□□ 0.29
SHANK2-204ENST00000409530 A0A1W2PQJ5 194 aa16.88■□□□□ 0.29
SHANK2-204ENST00000409530 DCDC2CA8MYV0 355 aa16.88■□□□□ 0.29
SHANK2-204ENST00000409530 CD4P01730 458 aa16.88■□□□□ 0.29
SHANK2-204ENST00000409530 CYP2C18P33260 490 aa16.88■□□□□ 0.29
SHANK2-204ENST00000409530 TRPC3Q13507 836 aa16.88■□□□□ 0.29
SHANK2-204ENST00000409530 BFSP2Q13515 415 aa16.88■□□□□ 0.29
SHANK2-204ENST00000409530 DUOXA2Q1HG44 320 aa16.88■□□□□ 0.29
SHANK2-204ENST00000409530 FIGNQ5HY92 759 aa16.88■□□□□ 0.29
SHANK2-204ENST00000409530 CAGE1Q8TC20 777 aa16.88■□□□□ 0.29
SHANK2-204ENST00000409530 C18orf25Q96B23 403 aaPredicted RBP16.88■□□□□ 0.29
SHANK2-204ENST00000409530 SNX27Q96L92 541 aa16.88■□□□□ 0.29
SHANK2-204ENST00000409530 ZMAT2Q96NC0 199 aaKnown RBP16.88■□□□□ 0.29
SHANK2-204ENST00000409530 NT5C1BQ96P26 610 aa16.88■□□□□ 0.29
SHANK2-204ENST00000409530 PANX2Q96RD6 677 aa16.88■□□□□ 0.29
SHANK2-204ENST00000409530 DNAJC7Q99615 494 aa16.88■□□□□ 0.29
SHANK2-204ENST00000409530 PLCB1Q9NQ66 1216 aa16.88■□□□□ 0.29
SHANK2-204ENST00000409530 ZNHIT6Q9NWK9 470 aaKnown RBP16.88■□□□□ 0.29
SHANK2-204ENST00000409530 TANC1Q9C0D5 1861 aa16.88■□□□□ 0.29
SHANK2-204ENST00000409530 GFPT2O94808 682 aa16.88■□□□□ 0.29
SHANK2-204ENST00000409530 CST3P01034 146 aaPredicted RBP16.88■□□□□ 0.29
SHANK2-204ENST00000409530 GTF2H1P32780 548 aa16.88■□□□□ 0.29
SHANK2-204ENST00000409530 MLH1P40692 756 aa16.88■□□□□ 0.29
SHANK2-204ENST00000409530 MYL6P60660 151 aa16.88■□□□□ 0.29
SHANK2-204ENST00000409530 CLDN10P78369 228 aa16.88■□□□□ 0.29
SHANK2-204ENST00000409530 FAAP100Q0VG06 881 aa16.88■□□□□ 0.29
SHANK2-204ENST00000409530 LRRC26Q2I0M4 334 aa16.88■□□□□ 0.29
SHANK2-204ENST00000409530 HS1BP3Q53T59 392 aa16.88■□□□□ 0.29
SHANK2-204ENST00000409530 C15orf39Q6ZRI6 1047 aa16.88■□□□□ 0.29
SHANK2-204ENST00000409530 DEFB128Q7Z7B8 93 aa16.88■□□□□ 0.29
SHANK2-204ENST00000409530 GOLGA2P5Q9HBQ8 144 aa16.88■□□□□ 0.29
SHANK2-204ENST00000409530 CACNG4Q9UBN1 327 aa16.88■□□□□ 0.29
SHANK2-204ENST00000409530 P4HA2O15460 535 aa16.87■□□□□ 0.29
SHANK2-204ENST00000409530 NOP14P78316 857 aaKnown RBP16.87■□□□□ 0.29
SHANK2-204ENST00000409530 DRAP1Q14919 205 aaPredicted RBP16.87■□□□□ 0.29
SHANK2-204ENST00000409530 SURF1Q15526 300 aa16.87■□□□□ 0.29
SHANK2-204ENST00000409530 WDR44Q5JSH3 913 aa16.87■□□□□ 0.29
SHANK2-204ENST00000409530 SFMBT2Q5VUG0 894 aa16.87■□□□□ 0.29
SHANK2-204ENST00000409530 WDR59Q6PJI9 974 aa16.87■□□□□ 0.29
SHANK2-204ENST00000409530 TOGARAM2Q6ZUX3 1019 aa16.87■□□□□ 0.29
SHANK2-204ENST00000409530 ZSCAN30Q86W11 494 aa16.87■□□□□ 0.29
SHANK2-204ENST00000409530 C1orf127Q8N9H9 656 aa16.87■□□□□ 0.29
SHANK2-204ENST00000409530 IMPG2Q9BZV3 1241 aa16.87■□□□□ 0.29
SHANK2-204ENST00000409530 TRMT1Q9NXH9 659 aaKnown RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms