RNA–Protein interactions for RNA: ENST00000409435.5

SCN9A-202, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 5,967 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-202ENST00000409435 FBXO10Q9UK96 956 aa7.75□□□□□ -1.17
SCN9A-202ENST00000409435 TBC1D3BA6NDS4 549 aa7.75□□□□□ -1.17
SCN9A-202ENST00000409435 CYP2C18P33260 490 aa7.75□□□□□ -1.17
SCN9A-202ENST00000409435 LIFRP42702 1097 aa7.75□□□□□ -1.17
SCN9A-202ENST00000409435 TAF6P49848 677 aa7.75□□□□□ -1.17
SCN9A-202ENST00000409435 PMS1P54277 932 aaKnown RBP7.75□□□□□ -1.17
SCN9A-202ENST00000409435 BCAR1P56945 870 aa7.75□□□□□ -1.17
SCN9A-202ENST00000409435 HSP90AA4PQ58FG1 418 aa7.75□□□□□ -1.17
SCN9A-202ENST00000409435 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.75□□□□□ -1.17
SCN9A-202ENST00000409435 ZNF513Q8N8E2 541 aaPredicted RBP7.75□□□□□ -1.17
SCN9A-202ENST00000409435 SH3KBP1Q96B97 665 aa7.75□□□□□ -1.17
SCN9A-202ENST00000409435 CCDC124Q96CT7 223 aaKnown RBP7.75□□□□□ -1.17
SCN9A-202ENST00000409435 EDEM3Q9BZQ6 932 aa7.75□□□□□ -1.17
SCN9A-202ENST00000409435 BLZF1Q9H2G9 400 aa7.75□□□□□ -1.17
SCN9A-202ENST00000409435 LZTFL1Q9NQ48 299 aa7.75□□□□□ -1.17
SCN9A-202ENST00000409435 STK17AQ9UEE5 414 aa7.75□□□□□ -1.17
SCN9A-202ENST00000409435 NRBP1Q9UHY1 535 aa7.75□□□□□ -1.17
SCN9A-202ENST00000409435 RHOBTB1O94844 696 aa7.75□□□□□ -1.17
SCN9A-202ENST00000409435 MMP3P08254 477 aa7.75□□□□□ -1.17
SCN9A-202ENST00000409435 ATP6V1E1P36543 226 aa7.75□□□□□ -1.17
SCN9A-202ENST00000409435 ARHGEF7Q14155 803 aa7.75□□□□□ -1.17
SCN9A-202ENST00000409435 UAP1L1Q3KQV9 507 aa7.75□□□□□ -1.17
SCN9A-202ENST00000409435 USP41Q3LFD5 358 aa7.75□□□□□ -1.17
SCN9A-202ENST00000409435 DENND2CQ68D51 928 aa7.75□□□□□ -1.17
SCN9A-202ENST00000409435 CORO1BQ9BR76 489 aa7.75□□□□□ -1.17
SCN9A-202ENST00000409435 DDX28Q9NUL7 540 aaKnown RBP7.75□□□□□ -1.17
SCN9A-202ENST00000409435 ABCF3Q9NUQ8 709 aa7.75□□□□□ -1.17
SCN9A-202ENST00000409435 AGAP1Q9UPQ3 857 aa7.75□□□□□ -1.17
SCN9A-202ENST00000409435 UTP11Q9Y3A2 253 aaKnown RBP7.75□□□□□ -1.17
SCN9A-202ENST00000409435 LRP6O75581 1613 aa7.75□□□□□ -1.17
SCN9A-202ENST00000409435 SERPINB6P35237 376 aa7.74□□□□□ -1.17
SCN9A-202ENST00000409435 DEUP1Q05D60 604 aa7.74□□□□□ -1.17
SCN9A-202ENST00000409435 ALX1Q15699 326 aa7.74□□□□□ -1.17
SCN9A-202ENST00000409435 ATG9AQ7Z3C6 839 aa7.74□□□□□ -1.17
SCN9A-202ENST00000409435 FAM186BQ8IYM0 893 aa7.74□□□□□ -1.17
SCN9A-202ENST00000409435 ANKLE1Q8NAG6 615 aa7.74□□□□□ -1.17
SCN9A-202ENST00000409435 HASPINQ8TF76 798 aa7.74□□□□□ -1.17
SCN9A-202ENST00000409435 CASP10Q92851 521 aa7.74□□□□□ -1.17
SCN9A-202ENST00000409435 GMCL1Q96IK5 515 aa7.74□□□□□ -1.17
SCN9A-202ENST00000409435 ACTR5Q9H9F9 607 aaPredicted RBP7.74□□□□□ -1.17
SCN9A-202ENST00000409435 SP110Q9HB58 689 aa7.74□□□□□ -1.17
SCN9A-202ENST00000409435 LAMTOR5O43504 91 aa7.74□□□□□ -1.17
SCN9A-202ENST00000409435 IL18RAPO95256 599 aa7.74□□□□□ -1.17
SCN9A-202ENST00000409435 SMIM10L2AP0DMW4 78 aa7.74□□□□□ -1.17
SCN9A-202ENST00000409435 SMIM10L2BP0DMW5 78 aa7.74□□□□□ -1.17
SCN9A-202ENST00000409435 INSRRP14616 1297 aa7.74□□□□□ -1.17
SCN9A-202ENST00000409435 AXLP30530 894 aa7.74□□□□□ -1.17
SCN9A-202ENST00000409435 TUFMP49411 452 aaKnown RBP7.74□□□□□ -1.17
SCN9A-202ENST00000409435 DUOXA2Q1HG44 320 aa7.74□□□□□ -1.17
SCN9A-202ENST00000409435 MEI1Q5TIA1 1274 aa7.74□□□□□ -1.17
SCN9A-202ENST00000409435 CNKSR3Q6P9H4 555 aa7.74□□□□□ -1.17
SCN9A-202ENST00000409435 HERC6Q8IVU3 1022 aa7.74□□□□□ -1.17
SCN9A-202ENST00000409435 CPA6Q8N4T0 437 aa7.74□□□□□ -1.17
SCN9A-202ENST00000409435 CCNYQ8ND76 341 aa7.74□□□□□ -1.17
SCN9A-202ENST00000409435 GLMNQ92990 594 aa7.74□□□□□ -1.17
SCN9A-202ENST00000409435 CHMP6Q96FZ7 201 aa7.74□□□□□ -1.17
SCN9A-202ENST00000409435 CCDC138Q96M89 665 aa7.74□□□□□ -1.17
SCN9A-202ENST00000409435 TXLNGQ9NUQ3 528 aa7.74□□□□□ -1.17
SCN9A-202ENST00000409435 CHCHD3Q9NX63 227 aaKnown RBP7.74□□□□□ -1.17
SCN9A-202ENST00000409435 SNX9Q9Y5X1 595 aa7.74□□□□□ -1.17
SCN9A-202ENST00000409435 A0A0G2JLL6 359 aaPredicted RBP7.74□□□□□ -1.17
SCN9A-202ENST00000409435 ABHD14A-ACY1A0A1B0GW23 586 aa7.74□□□□□ -1.17
SCN9A-202ENST00000409435 RASSF10A6NK89 507 aa7.74□□□□□ -1.17
SCN9A-202ENST00000409435 YDJCA8MPS7 323 aa7.74□□□□□ -1.17
SCN9A-202ENST00000409435 CDK17Q00537 523 aa7.74□□□□□ -1.17
SCN9A-202ENST00000409435 NAA30Q147X3 362 aaPredicted RBP7.74□□□□□ -1.17
SCN9A-202ENST00000409435 PRRT2Q7Z6L0 340 aaPredicted RBP7.74□□□□□ -1.17
SCN9A-202ENST00000409435 SCG3Q8WXD2 468 aaKnown RBP7.74□□□□□ -1.17
SCN9A-202ENST00000409435 TCF25Q9BQ70 676 aa7.74□□□□□ -1.17
SCN9A-202ENST00000409435 H0Y626 953 aa7.74□□□□□ -1.17
SCN9A-202ENST00000409435 PDHBP11177 359 aa7.74□□□□□ -1.17
SCN9A-202ENST00000409435 ACLYP53396 1101 aa7.74□□□□□ -1.17
SCN9A-202ENST00000409435 SGCGQ13326 291 aa7.74□□□□□ -1.17
SCN9A-202ENST00000409435 LRRC32Q14392 662 aa7.74□□□□□ -1.17
SCN9A-202ENST00000409435 AASDHQ4L235 1098 aaPredicted RBP7.74□□□□□ -1.17
SCN9A-202ENST00000409435 PABPC1LQ4VXU2 614 aaKnown RBP7.74□□□□□ -1.17
SCN9A-202ENST00000409435 DSG4Q86SJ6 1040 aa7.74□□□□□ -1.17
SCN9A-202ENST00000409435 UBL4BQ8N7F7 174 aa7.74□□□□□ -1.17
SCN9A-202ENST00000409435 IFT43Q96FT9 208 aa7.74□□□□□ -1.17
SCN9A-202ENST00000409435 ZFYVE1Q9HBF4 777 aa7.74□□□□□ -1.17
SCN9A-202ENST00000409435 AGO2Q9UKV8 859 aaKnown RBP7.74□□□□□ -1.17
SCN9A-202ENST00000409435 GOLGA8SH3BPF8 625 aa7.74□□□□□ -1.17
SCN9A-202ENST00000409435 DAB1O75553 588 aa7.74□□□□□ -1.17
SCN9A-202ENST00000409435 STAT1P42224 750 aa7.74□□□□□ -1.17
SCN9A-202ENST00000409435 SLC11A2P49281 568 aa7.74□□□□□ -1.17
SCN9A-202ENST00000409435 CLCN3P51790 818 aa7.74□□□□□ -1.17
SCN9A-202ENST00000409435 RWDD2BP57060 319 aa7.74□□□□□ -1.17
SCN9A-202ENST00000409435 FBXW4P57775 412 aa7.74□□□□□ -1.17
SCN9A-202ENST00000409435 PFKFB3Q16875 520 aaPredicted RBP7.74□□□□□ -1.17
SCN9A-202ENST00000409435 C15orf52Q6ZUT6 534 aaKnown RBP7.74□□□□□ -1.17
SCN9A-202ENST00000409435 CTAGE3PQ8IX95 158 aa7.74□□□□□ -1.17
SCN9A-202ENST00000409435 PBXIP1Q96AQ6 731 aa7.74□□□□□ -1.17
SCN9A-202ENST00000409435 RILPQ96NA2 401 aa7.74□□□□□ -1.17
SCN9A-202ENST00000409435 EIF2AK1Q9BQI3 630 aaKnown RBP7.74□□□□□ -1.17
SCN9A-202ENST00000409435 AASDHPPTQ9NRN7 309 aa7.74□□□□□ -1.17
SCN9A-202ENST00000409435 HSPA8P11142 646 aaKnown RBP7.73□□□□□ -1.17
SCN9A-202ENST00000409435 UAP1Q16222 522 aaPredicted RBP7.73□□□□□ -1.17
SCN9A-202ENST00000409435 FBXO32Q969P5 355 aa7.73□□□□□ -1.17
SCN9A-202ENST00000409435 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.73□□□□□ -1.17
SCN9A-202ENST00000409435 ANGPTL3Q9Y5C1 460 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms