RNA–Protein interactions for RNA: ENST00000409198.5

NEB-204, Transcript of nebulin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene NEB, Length 20,637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-204ENST00000409198 MTHFD1LQ6UB35 978 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 HIST3H2AQ7L7L0 130 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 DDIASQ8IXT1 998 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 TNIP2Q8NFZ5 429 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 NKX2-3Q8TAU0 364 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 HIST1H2ACQ93077 130 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 TRIM4Q9C037 500 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 SIK2Q9H0K1 926 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 GTF3C5Q9Y5Q8 519 aaPredicted RBP3.56□□□□□ -1.84
NEB-204ENST00000409198 MYMKA6NI61 221 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 IFRD1O00458 451 aaPredicted RBP3.56□□□□□ -1.84
NEB-204ENST00000409198 CHRNA3P32297 505 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 PPARAQ07869 468 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 EDRF1Q3B7T1 1238 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 USP41Q3LFD5 358 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 SUGP1Q8IWZ8 645 aaKnown RBP3.56□□□□□ -1.84
NEB-204ENST00000409198 DSELQ8IZU8 1212 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 SPATA33Q96N06 139 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 ZNF804BA4D1E1 1349 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 USP17L15C9J2P7 530 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 USP17L13C9JLJ4 530 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 USP17L11C9JVI0 530 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 USP17L18D6R9N7 530 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 USP17L22D6RA61 530 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 USP17L17D6RBQ6 530 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 USP17L19D6RCP7 530 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 USP17L20D6RJB6 530 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 TJP3O95049 919 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 SERPINB3P29508 390 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 RPL21P46778 160 aaKnown RBP3.56□□□□□ -1.84
NEB-204ENST00000409198 SARSP49591 514 aaKnown RBP3.56□□□□□ -1.84
NEB-204ENST00000409198 AP2B1P63010 937 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 USP17L24Q0WX57 530 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 MORF4L2Q15014 288 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 SCARA5Q6ZMJ2 495 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 CYP4Z1Q86W10 505 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 TNIP3Q96KP6 325 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 MAGEF1Q9HAY2 307 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 DDX41Q9UJV9 622 aaKnown RBP3.56□□□□□ -1.84
NEB-204ENST00000409198 A0A088AWK7 358 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 USP17L10C9JJH3 530 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 ZNF10P21506 573 aaPredicted RBP3.56□□□□□ -1.84
NEB-204ENST00000409198 HCAR2Q8TDS4 363 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 CCDC51Q96ER9 411 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 CALR3Q96L12 384 aaKnown RBP3.56□□□□□ -1.84
NEB-204ENST00000409198 CNBD2Q96M20 576 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 TACO1Q9BSH4 297 aaKnown RBP3.56□□□□□ -1.84
NEB-204ENST00000409198 LSG1Q9H089 658 aaKnown RBP3.56□□□□□ -1.84
NEB-204ENST00000409198 CETPP11597 493 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 RFX3P48380 749 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 TWF1Q12792 350 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 LRRC24Q50LG9 513 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 MACC1Q6ZN28 852 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 SPATS2Q86XZ4 545 aaKnown RBP3.56□□□□□ -1.84
NEB-204ENST00000409198 TDRD7Q8NHU6 1098 aaKnown RBP3.56□□□□□ -1.84
NEB-204ENST00000409198 TSPAN17Q96FV3 270 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 MKNK1Q9BUB5 465 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 PACSIN1Q9BY11 444 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 TRIM17Q9Y577 477 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 RAPGEF6Q8TEU7 1601 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.56□□□□□ -1.84
NEB-204ENST00000409198 RPS6KA5O75582 802 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 LYNP07948 512 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 NR1D1P20393 614 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 ZNF177Q13360 481 aaPredicted RBP3.56□□□□□ -1.84
NEB-204ENST00000409198 MAGOHBQ96A72 148 aaKnown RBP3.56□□□□□ -1.84
NEB-204ENST00000409198 AHSPQ9NZD4 102 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 TMEM191CA6NGB0 347 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 FGRP09769 529 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 SOX6P35712 828 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 RPS7P62081 194 aaKnown RBP3.56□□□□□ -1.84
NEB-204ENST00000409198 GCKRQ14397 625 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 FBXO31Q5XUX0 539 aaPredicted RBP3.56□□□□□ -1.84
NEB-204ENST00000409198 GOLPH3LQ9H4A5 285 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 TMEM39AQ9NV64 488 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 CTNNAL1Q9UBT7 734 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 PAIP2BQ9ULR5 123 aaKnown RBP3.56□□□□□ -1.84
NEB-204ENST00000409198 KIAA1024Q9UPX6 916 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 CDC42BPAQ5VT25 1732 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 HEATR9A2RTY3 570 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 MLYCDO95822 493 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 CDC37Q16543 378 aaPredicted RBP3.56□□□□□ -1.84
NEB-204ENST00000409198 PGM2L1Q6PCE3 622 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 PRR23CQ6ZRP0 262 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 ITIH5Q86UX2 942 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 CATSPERBQ9H7T0 1116 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 SERPINB13Q9UIV8 391 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 ADAMTS12P58397 1594 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 ARHGEF11O15085 1522 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 SRGAP2O75044 1071 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 PLS3P13797 630 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 SDC4P31431 198 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 ALS2CLQ60I27 953 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 TSPAN14Q8NG11 270 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 MIR1-1HGQ9H1L0 117 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 SCN3BQ9NY72 215 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 DACT1Q9NYF0 836 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 WHRNQ9P202 907 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 PTPN22Q9Y2R2 807 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 ZAP70P43403 619 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms