RNA–Protein interactions for RNA: ENST00000406757.2

GPC3-203, Transcript of glypican 3, humanhuman

TSL 2

Gene GPC3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-203ENST00000406757 CRELD2Q6UXH1 353 aaPredicted RBP9.09□□□□□ -0.95
GPC3-203ENST00000406757 ZPBP2Q6X784 338 aa9.09□□□□□ -0.95
GPC3-203ENST00000406757 RTN4RL1Q86UN2 441 aaPredicted RBP9.09□□□□□ -0.95
GPC3-203ENST00000406757 DBF4BQ8NFT6 615 aa9.09□□□□□ -0.95
GPC3-203ENST00000406757 CXCL16Q9H2A7 254 aa9.09□□□□□ -0.95
GPC3-203ENST00000406757 UBE2ZQ9H832 354 aaPredicted RBP9.09□□□□□ -0.95
GPC3-203ENST00000406757 AGPAT5Q9NUQ2 364 aa9.09□□□□□ -0.95
GPC3-203ENST00000406757 TAB2Q9NYJ8 693 aa9.09□□□□□ -0.95
GPC3-203ENST00000406757 AGO2Q9UKV8 859 aaKnown RBP9.09□□□□□ -0.95
GPC3-203ENST00000406757 INSL6Q9Y581 213 aa9.09□□□□□ -0.95
GPC3-203ENST00000406757 STYXL1Q9Y6J8 313 aa9.09□□□□□ -0.95
GPC3-203ENST00000406757 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.08□□□□□ -0.96
GPC3-203ENST00000406757 N4BP3O15049 544 aa9.08□□□□□ -0.96
GPC3-203ENST00000406757 MEFVO15553 781 aaPredicted RBP9.08□□□□□ -0.96
GPC3-203ENST00000406757 CAND2O75155 1236 aa9.08□□□□□ -0.96
GPC3-203ENST00000406757 CAVIN2O95810 425 aa9.08□□□□□ -0.96
GPC3-203ENST00000406757 AMHP03971 560 aa9.08□□□□□ -0.96
GPC3-203ENST00000406757 GARTP22102 1010 aa9.08□□□□□ -0.96
GPC3-203ENST00000406757 KCNA5P22460 613 aa9.08□□□□□ -0.96
GPC3-203ENST00000406757 AKAP5P24588 427 aa9.08□□□□□ -0.96
GPC3-203ENST00000406757 RPL13P26373 211 aaKnown RBP9.08□□□□□ -0.96
GPC3-203ENST00000406757 ABCD1P33897 745 aa9.08□□□□□ -0.96
GPC3-203ENST00000406757 MTIF2P46199 727 aaKnown RBP9.08□□□□□ -0.96
GPC3-203ENST00000406757 DLG4P78352 724 aa9.08□□□□□ -0.96
GPC3-203ENST00000406757 MCL1Q07820 350 aa9.08□□□□□ -0.96
GPC3-203ENST00000406757 NCBP1Q09161 790 aaKnown RBP9.08□□□□□ -0.96
GPC3-203ENST00000406757 NOLC1Q14978 699 aaKnown RBP eCLIP9.08□□□□□ -0.961e-32■■□□□ 12.5
GPC3-203ENST00000406757 CDKAL1Q5VV42 579 aa9.08□□□□□ -0.96
GPC3-203ENST00000406757 LMBRD2Q68DH5 695 aaPredicted RBP9.08□□□□□ -0.96
GPC3-203ENST00000406757 TWF2Q6IBS0 349 aaKnown RBP9.08□□□□□ -0.96
GPC3-203ENST00000406757 SLFN12LQ6IEE8 588 aa9.08□□□□□ -0.96
GPC3-203ENST00000406757 NOTUMQ6P988 496 aa9.08□□□□□ -0.96
GPC3-203ENST00000406757 SLC27A1Q6PCB7 646 aa9.08□□□□□ -0.96
GPC3-203ENST00000406757 FILIP1Q7Z7B0 1213 aa9.08□□□□□ -0.96
GPC3-203ENST00000406757 ZC3H3Q8IXZ2 948 aaKnown RBP9.08□□□□□ -0.96
GPC3-203ENST00000406757 FAM186BQ8IYM0 893 aa9.08□□□□□ -0.96
GPC3-203ENST00000406757 GPD1LQ8N335 351 aa9.08□□□□□ -0.96
GPC3-203ENST00000406757 XXYLT1Q8NBI6 393 aa9.08□□□□□ -0.96
GPC3-203ENST00000406757 RNF169Q8NCN4 708 aa9.08□□□□□ -0.96
GPC3-203ENST00000406757 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.08□□□□□ -0.96
GPC3-203ENST00000406757 GOLGA5Q8TBA6 731 aa9.08□□□□□ -0.96
GPC3-203ENST00000406757 PLEKHO2Q8TD55 490 aa9.08□□□□□ -0.96
GPC3-203ENST00000406757 LINC01599Q8WXQ3 324 aa9.08□□□□□ -0.96
GPC3-203ENST00000406757 KCNN1Q92952 543 aa9.08□□□□□ -0.96
GPC3-203ENST00000406757 LPPQ93052 612 aa9.08□□□□□ -0.96
GPC3-203ENST00000406757 CCDC127Q96BQ5 260 aa9.08□□□□□ -0.96
GPC3-203ENST00000406757 CNOT6LQ96LI5 555 aaKnown RBP9.08□□□□□ -0.96
GPC3-203ENST00000406757 PRIMPOLQ96LW4 560 aa9.08□□□□□ -0.96
GPC3-203ENST00000406757 POP1Q99575 1024 aaKnown RBP9.08□□□□□ -0.96
GPC3-203ENST00000406757 ADAM2Q99965 735 aa9.08□□□□□ -0.96
GPC3-203ENST00000406757 IFIH1Q9BYX4 1025 aaKnown RBP9.08□□□□□ -0.96
GPC3-203ENST00000406757 VPS16Q9H269 839 aa9.08□□□□□ -0.96
GPC3-203ENST00000406757 THAP9Q9H5L6 903 aa9.08□□□□□ -0.96
GPC3-203ENST00000406757 MMRN2Q9H8L6 949 aa9.08□□□□□ -0.96
GPC3-203ENST00000406757 C11orf16Q9NQ32 467 aa9.08□□□□□ -0.96
GPC3-203ENST00000406757 SNTG2Q9NY99 539 aa9.08□□□□□ -0.96
GPC3-203ENST00000406757 KLK14Q9P0G3 267 aa9.08□□□□□ -0.96
GPC3-203ENST00000406757 MAGEC2Q9UBF1 373 aaPredicted RBP9.08□□□□□ -0.96
GPC3-203ENST00000406757 HCN4Q9Y3Q4 1203 aa9.08□□□□□ -0.96
GPC3-203ENST00000406757 FSD2A1L4K1 749 aa9.07□□□□□ -0.96
GPC3-203ENST00000406757 MEIS3P2A8K0S8 358 aa9.07□□□□□ -0.96
GPC3-203ENST00000406757 OGTO15294 1046 aa9.07□□□□□ -0.96
GPC3-203ENST00000406757 EXTL3O43909 919 aa9.07□□□□□ -0.96
GPC3-203ENST00000406757 FAM189A1O60320 539 aa9.07□□□□□ -0.96
GPC3-203ENST00000406757 UPP2O95045 317 aa9.07□□□□□ -0.96
GPC3-203ENST00000406757 RPLP2P05387 115 aaKnown RBP9.07□□□□□ -0.96
GPC3-203ENST00000406757 TRIM49P0CI25 452 aa9.07□□□□□ -0.96
GPC3-203ENST00000406757 TRIM49CP0CI26 452 aa9.07□□□□□ -0.96
GPC3-203ENST00000406757 STAG3L1P0CL83 205 aa9.07□□□□□ -0.96
GPC3-203ENST00000406757 MCF2P10911 925 aa9.07□□□□□ -0.96
GPC3-203ENST00000406757 EPB41P11171 864 aaKnown RBP9.07□□□□□ -0.96
GPC3-203ENST00000406757 IL9P15248 144 aa9.07□□□□□ -0.96
GPC3-203ENST00000406757 ZNF18P17022 549 aa9.07□□□□□ -0.96
GPC3-203ENST00000406757 ZSCAN20P17040 1043 aaPredicted RBP9.07□□□□□ -0.96
GPC3-203ENST00000406757 SCP2P22307 547 aa9.07□□□□□ -0.96
GPC3-203ENST00000406757 AXLP30530 894 aa9.07□□□□□ -0.96
GPC3-203ENST00000406757 PSMC2P35998 433 aaKnown RBP9.07□□□□□ -0.96
GPC3-203ENST00000406757 TPM4P67936 248 aa9.07□□□□□ -0.96
GPC3-203ENST00000406757 HTRA4P83105 476 aaPredicted RBP9.07□□□□□ -0.96
GPC3-203ENST00000406757 FANCCQ00597 558 aa9.07□□□□□ -0.96
GPC3-203ENST00000406757 DSC3Q14574 896 aa9.07□□□□□ -0.96
GPC3-203ENST00000406757 KRT31Q15323 416 aa9.07□□□□□ -0.96
GPC3-203ENST00000406757 SNRNP35Q16560 246 aaKnown RBP9.07□□□□□ -0.96
GPC3-203ENST00000406757 NFIL3Q16649 462 aa9.07□□□□□ -0.96
GPC3-203ENST00000406757 LEXMQ3ZCV2 418 aa9.07□□□□□ -0.96
GPC3-203ENST00000406757 PLEKHG4Q58EX7 1191 aa9.07□□□□□ -0.96
GPC3-203ENST00000406757 TCP11X2Q5H9J9 407 aa9.07□□□□□ -0.96
GPC3-203ENST00000406757 DCAF17Q5H9S7 520 aaPredicted RBP9.07□□□□□ -0.96
GPC3-203ENST00000406757 SCARA3Q6AZY7 606 aa9.07□□□□□ -0.96
GPC3-203ENST00000406757 SLC9A9Q8IVB4 645 aa9.07□□□□□ -0.96
GPC3-203ENST00000406757 C12orf56Q8IXR9 622 aa9.07□□□□□ -0.96
GPC3-203ENST00000406757 SMG8Q8ND04 991 aaKnown RBP9.07□□□□□ -0.96
GPC3-203ENST00000406757 CEP63Q96MT8 703 aa9.07□□□□□ -0.96
GPC3-203ENST00000406757 NAP1L5Q96NT1 182 aaPredicted RBP9.07□□□□□ -0.96
GPC3-203ENST00000406757 ADPGKQ9BRR6 497 aa9.07□□□□□ -0.96
GPC3-203ENST00000406757 TRIM6Q9C030 488 aaPredicted RBP9.07□□□□□ -0.96
GPC3-203ENST00000406757 NXF3Q9H4D5 531 aaKnown RBP9.07□□□□□ -0.96
GPC3-203ENST00000406757 GRPEL1Q9HAV7 217 aa9.07□□□□□ -0.96
GPC3-203ENST00000406757 PDE11AQ9HCR9 933 aa9.07□□□□□ -0.96
GPC3-203ENST00000406757 TOPORSQ9NS56 1045 aaPredicted RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms