RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 SURF1Q15526 300 aa26.48■■□□□ 1.83
DNMT3A-206ENST00000406659 ATF7IP2Q5U623 682 aa26.48■■□□□ 1.83
DNMT3A-206ENST00000406659 MPZL3Q6UWV2 235 aa26.48■■□□□ 1.83
DNMT3A-206ENST00000406659 CCNI2Q6ZMN8 369 aaPredicted RBP26.48■■□□□ 1.83
DNMT3A-206ENST00000406659 WDR49Q8IV35 697 aa26.48■■□□□ 1.83
DNMT3A-206ENST00000406659 ACTRT1Q8TDG2 376 aa26.48■■□□□ 1.83
DNMT3A-206ENST00000406659 FAM212AQ96EL1 285 aa26.48■■□□□ 1.83
DNMT3A-206ENST00000406659 MAML3Q96JK9 1138 aa26.48■■□□□ 1.83
DNMT3A-206ENST00000406659 MAP2K7O14733 419 aa26.48■■□□□ 1.83
DNMT3A-206ENST00000406659 CUL2Q13617 745 aa26.48■■□□□ 1.83
DNMT3A-206ENST00000406659 NCOA4Q13772 614 aa26.48■■□□□ 1.83
DNMT3A-206ENST00000406659 PCDHB2Q9Y5E7 798 aa26.48■■□□□ 1.83
DNMT3A-206ENST00000406659 ABLIM1O14639 778 aa26.47■■□□□ 1.83
DNMT3A-206ENST00000406659 PPFIA4O75335 1185 aa26.47■■□□□ 1.83
DNMT3A-206ENST00000406659 ACAD10Q6JQN1 1059 aa26.47■■□□□ 1.83
DNMT3A-206ENST00000406659 APOBEC3GQ9HC16 384 aaKnown RBP26.47■■□□□ 1.83
DNMT3A-206ENST00000406659 C11orf97A0A1B0GVM6 126 aaPredicted RBP26.46■■□□□ 1.83
DNMT3A-206ENST00000406659 ZNF286BP0CG31 522 aa26.46■■□□□ 1.83
DNMT3A-206ENST00000406659 TBXAS1P24557 533 aaPredicted RBP26.46■■□□□ 1.83
DNMT3A-206ENST00000406659 PHKA2P46019 1235 aa26.46■■□□□ 1.83
DNMT3A-206ENST00000406659 TNNC1P63316 161 aa26.46■■□□□ 1.83
DNMT3A-206ENST00000406659 ZNF677Q86XU0 584 aa26.46■■□□□ 1.83
DNMT3A-206ENST00000406659 HDAC7Q8WUI4 952 aa26.46■■□□□ 1.83
DNMT3A-206ENST00000406659 TINF2Q9BSI4 451 aa26.46■■□□□ 1.83
DNMT3A-206ENST00000406659 IMPG2Q9BZV3 1241 aa26.46■■□□□ 1.83
DNMT3A-206ENST00000406659 DMGDHQ9UI17 866 aaKnown RBP26.46■■□□□ 1.83
DNMT3A-206ENST00000406659 CPSF3Q9UKF6 684 aaKnown RBP26.46■■□□□ 1.83
DNMT3A-206ENST00000406659 COL1A2P08123 1366 aa26.46■■□□□ 1.83
DNMT3A-206ENST00000406659 SLC15A5A6NIM6 579 aa26.46■■□□□ 1.83
DNMT3A-206ENST00000406659 PGRMC1O00264 195 aaKnown RBP26.46■■□□□ 1.83
DNMT3A-206ENST00000406659 CLTAP09496 248 aa26.46■■□□□ 1.83
DNMT3A-206ENST00000406659 PROZP22891 400 aa26.46■■□□□ 1.83
DNMT3A-206ENST00000406659 SLC7A5Q01650 507 aa26.46■■□□□ 1.83
DNMT3A-206ENST00000406659 MBTD1Q05BQ5 628 aa26.46■■□□□ 1.83
DNMT3A-206ENST00000406659 CLEC16AQ2KHT3 1053 aa26.46■■□□□ 1.83
DNMT3A-206ENST00000406659 ZNF568Q3ZCX4 644 aa26.46■■□□□ 1.83
DNMT3A-206ENST00000406659 C11orf63Q6NUN7 778 aa26.46■■□□□ 1.83
DNMT3A-206ENST00000406659 BUD13Q9BRD0 619 aaKnown RBP eCLIP26.46■■□□□ 1.83
DNMT3A-206ENST00000406659 NFKBIZQ9BYH8 718 aa26.46■■□□□ 1.83
DNMT3A-206ENST00000406659 ABHD16BQ9H3Z7 469 aa26.46■■□□□ 1.83
DNMT3A-206ENST00000406659 SLC5A4Q9NY91 659 aa26.46■■□□□ 1.83
DNMT3A-206ENST00000406659 STIM2Q9P246 746 aa26.46■■□□□ 1.83
DNMT3A-206ENST00000406659 PCDHB4Q9Y5E5 795 aa26.46■■□□□ 1.83
DNMT3A-206ENST00000406659 CYP1A2P05177 515 aa26.45■■□□□ 1.82
DNMT3A-206ENST00000406659 NOP14P78316 857 aaKnown RBP26.45■■□□□ 1.82
DNMT3A-206ENST00000406659 MRPS25P82663 173 aaKnown RBP26.45■■□□□ 1.82
DNMT3A-206ENST00000406659 POU5F1BQ06416 359 aa26.45■■□□□ 1.82
DNMT3A-206ENST00000406659 ACVR2BQ13705 512 aa26.45■■□□□ 1.82
DNMT3A-206ENST00000406659 ZNF653Q96CK0 615 aa26.45■■□□□ 1.82
DNMT3A-206ENST00000406659 KRT12Q99456 494 aa26.45■■□□□ 1.82
DNMT3A-206ENST00000406659 C16orf70Q9BSU1 422 aa26.45■■□□□ 1.82
DNMT3A-206ENST00000406659 PTPRHQ9HD43 1115 aa26.45■■□□□ 1.82
DNMT3A-206ENST00000406659 PRMT7Q9NVM4 692 aaPredicted RBP26.45■■□□□ 1.82
DNMT3A-206ENST00000406659 ZHX1Q9UKY1 873 aaPredicted RBP26.45■■□□□ 1.82
DNMT3A-206ENST00000406659 EVPLQ92817 2033 aa26.44■■□□□ 1.82
DNMT3A-206ENST00000406659 B4GALT5O43286 388 aa26.44■■□□□ 1.82
DNMT3A-206ENST00000406659 MTA2O94776 668 aa26.44■■□□□ 1.82
DNMT3A-206ENST00000406659 CALCAP01258 141 aa26.44■■□□□ 1.82
DNMT3A-206ENST00000406659 SMPD1P17405 629 aa26.44■■□□□ 1.82
DNMT3A-206ENST00000406659 ACO1P21399 889 aaKnown RBP26.44■■□□□ 1.82
DNMT3A-206ENST00000406659 TMOD1P28289 359 aa26.44■■□□□ 1.82
DNMT3A-206ENST00000406659 DUOXA2Q1HG44 320 aa26.44■■□□□ 1.82
DNMT3A-206ENST00000406659 DUSP28Q4G0W2 176 aa26.44■■□□□ 1.82
DNMT3A-206ENST00000406659 THNSL1Q8IYQ7 743 aa26.44■■□□□ 1.82
DNMT3A-206ENST00000406659 RASGEF1CQ8N431 466 aa26.44■■□□□ 1.82
DNMT3A-206ENST00000406659 GTF3C4Q9UKN8 822 aa26.44■■□□□ 1.82
DNMT3A-206ENST00000406659 AKT3Q9Y243 479 aa26.44■■□□□ 1.82
DNMT3A-206ENST00000406659 NUB1Q9Y5A7 615 aa26.44■■□□□ 1.82
DNMT3A-206ENST00000406659 ALG6Q9Y672 507 aa26.44■■□□□ 1.82
DNMT3A-206ENST00000406659 H3BRB1 525 aa26.43■■□□□ 1.82
DNMT3A-206ENST00000406659 DDX3YO15523 660 aaKnown RBP26.43■■□□□ 1.82
DNMT3A-206ENST00000406659 TNNT3P45378 269 aaPredicted RBP26.43■■□□□ 1.82
DNMT3A-206ENST00000406659 CASP8Q14790 479 aa26.43■■□□□ 1.82
DNMT3A-206ENST00000406659 IQSEC1Q6DN90 963 aa26.43■■□□□ 1.82
DNMT3A-206ENST00000406659 OR6J1Q8NGC5 347 aa26.43■■□□□ 1.82
DNMT3A-206ENST00000406659 HINFPQ9BQA5 517 aa26.43■■□□□ 1.82
DNMT3A-206ENST00000406659 TUT1Q9H6E5 874 aaKnown RBP26.43■■□□□ 1.82
DNMT3A-206ENST00000406659 MINDY3Q9H8M7 445 aa26.43■■□□□ 1.82
DNMT3A-206ENST00000406659 TMEM59LQ9UK28 342 aa26.43■■□□□ 1.82
DNMT3A-206ENST00000406659 TNFSF13BQ9Y275 285 aa26.43■■□□□ 1.82
DNMT3A-206ENST00000406659 NOC2LQ9Y3T9 749 aaKnown RBP26.43■■□□□ 1.82
DNMT3A-206ENST00000406659 A0A0U1RQG5 324 aaPredicted RBP26.43■■□□□ 1.82
DNMT3A-206ENST00000406659 TMEM110-MUSTN1A8MSY1 372 aa26.43■■□□□ 1.82
DNMT3A-206ENST00000406659 EEF1DP3Q658K8 133 aa26.43■■□□□ 1.82
DNMT3A-206ENST00000406659 NPLOC4Q8TAT6 608 aa26.43■■□□□ 1.82
DNMT3A-206ENST00000406659 NUP85Q9BW27 656 aa26.43■■□□□ 1.82
DNMT3A-206ENST00000406659 MTMR12Q9C0I1 747 aa26.43■■□□□ 1.82
DNMT3A-206ENST00000406659 ATMINO43313 823 aaPredicted RBP26.42■■□□□ 1.82
DNMT3A-206ENST00000406659 HUNKP57058 714 aa26.42■■□□□ 1.82
DNMT3A-206ENST00000406659 SMC1AQ14683 1233 aaKnown RBP26.42■■□□□ 1.82
DNMT3A-206ENST00000406659 CST9Q5W186 159 aa26.42■■□□□ 1.82
DNMT3A-206ENST00000406659 TMEM270Q6UE05 265 aa26.42■■□□□ 1.82
DNMT3A-206ENST00000406659 LINC01465Q8N7H1 131 aa26.42■■□□□ 1.82
DNMT3A-206ENST00000406659 IFT122Q9HBG6 1241 aa26.42■■□□□ 1.82
DNMT3A-206ENST00000406659 UVRAGQ9P2Y5 699 aa26.42■■□□□ 1.82
DNMT3A-206ENST00000406659 CPA4Q9UI42 421 aa26.42■■□□□ 1.82
DNMT3A-206ENST00000406659 A0A087WZ62 844 aa26.41■■□□□ 1.82
DNMT3A-206ENST00000406659 GPS2Q13227 327 aa26.41■■□□□ 1.82
DNMT3A-206ENST00000406659 TRPC3Q13507 836 aa26.41■■□□□ 1.82
DNMT3A-206ENST00000406659 MESDQ14696 234 aa26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms