RNA–Protein interactions for RNA: ENST00000406434.5

FAM49A-202, Transcript of family with sequence similarity 49 member A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene FAM49A, Length 1,386 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49A-202ENST00000406434 SSX2IPQ9Y2D8 614 aa11.3□□□□□ -0.6
FAM49A-202ENST00000406434 TTC28Q96AY4 2481 aa11.3□□□□□ -0.6
FAM49A-202ENST00000406434 ZMYM2Q9UBW7 1377 aa11.3□□□□□ -0.6
FAM49A-202ENST00000406434 NCOR1O75376 2440 aa11.3□□□□□ -0.6
FAM49A-202ENST00000406434 ABLIM1O14639 778 aa11.29□□□□□ -0.6
FAM49A-202ENST00000406434 HNRNPDLO14979 420 aaKnown RBP11.29□□□□□ -0.6
FAM49A-202ENST00000406434 GPR37O15354 613 aa11.29□□□□□ -0.6
FAM49A-202ENST00000406434 POLR2DO15514 142 aaKnown RBP11.29□□□□□ -0.6
FAM49A-202ENST00000406434 LILRB3O75022 631 aa11.29□□□□□ -0.6
FAM49A-202ENST00000406434 B3GAT3O94766 335 aa11.29□□□□□ -0.6
FAM49A-202ENST00000406434 KIF4AO95239 1232 aa11.29□□□□□ -0.6
FAM49A-202ENST00000406434 EPCAMP16422 314 aa11.29□□□□□ -0.6
FAM49A-202ENST00000406434 GLUD2P49448 558 aa11.29□□□□□ -0.6
FAM49A-202ENST00000406434 CLCNKBP51801 687 aa11.29□□□□□ -0.6
FAM49A-202ENST00000406434 MCL1Q07820 350 aa11.29□□□□□ -0.6
FAM49A-202ENST00000406434 KCNC3Q14003 757 aa11.29□□□□□ -0.6
FAM49A-202ENST00000406434 SMAD2Q15796 467 aaKnown RBP11.29□□□□□ -0.6
FAM49A-202ENST00000406434 USP41Q3LFD5 358 aa11.29□□□□□ -0.6
FAM49A-202ENST00000406434 AXDND1Q5T1B0 1012 aaPredicted RBP11.29□□□□□ -0.6
FAM49A-202ENST00000406434 FAM171A1Q5VUB5 890 aa11.29□□□□□ -0.6
FAM49A-202ENST00000406434 KIAA0319Q5VV43 1072 aa11.29□□□□□ -0.6
FAM49A-202ENST00000406434 KANK3Q6NY19 840 aa11.29□□□□□ -0.6
FAM49A-202ENST00000406434 SYCE2Q6PIF2 218 aa11.29□□□□□ -0.6
FAM49A-202ENST00000406434 SHC4Q6S5L8 630 aa11.29□□□□□ -0.6
FAM49A-202ENST00000406434 ALKAL1Q6UXT8 129 aa11.29□□□□□ -0.6
FAM49A-202ENST00000406434 TMEM184AQ6ZMB5 413 aa11.29□□□□□ -0.6
FAM49A-202ENST00000406434 ZNF720Q7Z2F6 126 aa11.29□□□□□ -0.6
FAM49A-202ENST00000406434 PPFIBP1Q86W92 1011 aa11.29□□□□□ -0.6
FAM49A-202ENST00000406434 GLYCTKQ8IVS8 523 aa11.29□□□□□ -0.6
FAM49A-202ENST00000406434 GJD3Q8N144 294 aa11.29□□□□□ -0.6
FAM49A-202ENST00000406434 C12orf76Q8N812 135 aaPredicted RBP11.29□□□□□ -0.6
FAM49A-202ENST00000406434 RIN2Q8WYP3 895 aaPredicted RBP11.29□□□□□ -0.6
FAM49A-202ENST00000406434 DNAJC19Q96DA6 116 aa11.29□□□□□ -0.6
FAM49A-202ENST00000406434 CHAMP1Q96JM3 812 aa11.29□□□□□ -0.6
FAM49A-202ENST00000406434 ZMAT2Q96NC0 199 aaKnown RBP11.29□□□□□ -0.6
FAM49A-202ENST00000406434 PPP1R10Q96QC0 940 aaKnown RBP11.29□□□□□ -0.6
FAM49A-202ENST00000406434 HAPLN2Q9GZV7 340 aa11.29□□□□□ -0.6
FAM49A-202ENST00000406434 GOLGA2P5Q9HBQ8 144 aa11.29□□□□□ -0.6
FAM49A-202ENST00000406434 CD320Q9NPF0 282 aa11.29□□□□□ -0.6
FAM49A-202ENST00000406434 PANK4Q9NVE7 773 aa11.29□□□□□ -0.6
FAM49A-202ENST00000406434 FAM13BQ9NYF5 915 aa11.29□□□□□ -0.6
FAM49A-202ENST00000406434 RCOR1Q9UKL0 485 aa11.29□□□□□ -0.6
FAM49A-202ENST00000406434 ZDHHC9Q9Y397 364 aa11.29□□□□□ -0.6
FAM49A-202ENST00000406434 USP15Q9Y4E8 981 aaPredicted RBP11.29□□□□□ -0.6
FAM49A-202ENST00000406434 IRAK3Q9Y616 596 aa11.29□□□□□ -0.6
FAM49A-202ENST00000406434 CITO14578 2027 aa11.29□□□□□ -0.6
FAM49A-202ENST00000406434 VCANP13611 3396 aa11.29□□□□□ -0.6
FAM49A-202ENST00000406434 GCNT3O95395 438 aa11.28□□□□□ -0.6
FAM49A-202ENST00000406434 BRD1O95696 1058 aa11.28□□□□□ -0.6
FAM49A-202ENST00000406434 HOXB8P17481 243 aaPredicted RBP11.28□□□□□ -0.6
FAM49A-202ENST00000406434 GAP43P17677 238 aa11.28□□□□□ -0.6
FAM49A-202ENST00000406434 RPL17P18621 184 aaKnown RBP11.28□□□□□ -0.6
FAM49A-202ENST00000406434 IGFBP6P24592 240 aaPredicted RBP11.28□□□□□ -0.6
FAM49A-202ENST00000406434 GTF2BQ00403 316 aa11.28□□□□□ -0.6
FAM49A-202ENST00000406434 SPAG1Q07617 926 aa11.28□□□□□ -0.6
FAM49A-202ENST00000406434 NAB2Q15742 525 aa11.28□□□□□ -0.6
FAM49A-202ENST00000406434 SLC10A6Q3KNW5 377 aa11.28□□□□□ -0.6
FAM49A-202ENST00000406434 RARS2Q5T160 578 aaKnown RBP11.28□□□□□ -0.6
FAM49A-202ENST00000406434 CES5AQ6NT32 575 aa11.28□□□□□ -0.6
FAM49A-202ENST00000406434 DCLRE1AQ6PJP8 1040 aa11.28□□□□□ -0.6
FAM49A-202ENST00000406434 PALB2Q86YC2 1186 aa11.28□□□□□ -0.6
FAM49A-202ENST00000406434 IQUBQ8NA54 791 aa11.28□□□□□ -0.6
FAM49A-202ENST00000406434 SMRP1Q8NCR6 262 aa11.28□□□□□ -0.6
FAM49A-202ENST00000406434 SLC22A17Q8WUG5 538 aa11.28□□□□□ -0.6
FAM49A-202ENST00000406434 C18orf25Q96B23 403 aaPredicted RBP11.28□□□□□ -0.6
FAM49A-202ENST00000406434 SNX27Q96L92 541 aa11.28□□□□□ -0.6
FAM49A-202ENST00000406434 FIZ1Q96SL8 496 aa11.28□□□□□ -0.6
FAM49A-202ENST00000406434 MSTO1Q9BUK6 570 aa11.28□□□□□ -0.6
FAM49A-202ENST00000406434 LRRC27Q9C0I9 530 aa11.28□□□□□ -0.6
FAM49A-202ENST00000406434 S1PR5Q9H228 398 aa11.28□□□□□ -0.6
FAM49A-202ENST00000406434 CHST7Q9NS84 486 aa11.28□□□□□ -0.6
FAM49A-202ENST00000406434 SLC38A7Q9NVC3 462 aa11.28□□□□□ -0.6
FAM49A-202ENST00000406434 SF3B1O75533 1304 aaKnown RBP eCLIP11.28□□□□□ -0.6
FAM49A-202ENST00000406434 ANKRD63C9JTQ0 380 aa11.28□□□□□ -0.6
FAM49A-202ENST00000406434 OGTO15294 1046 aa11.28□□□□□ -0.6
FAM49A-202ENST00000406434 TEX28O15482 410 aa11.28□□□□□ -0.6
FAM49A-202ENST00000406434 ADH1AP07327 375 aa11.28□□□□□ -0.6
FAM49A-202ENST00000406434 CLTAP09496 248 aa11.28□□□□□ -0.6
FAM49A-202ENST00000406434 WEE2P0C1S8 567 aa11.28□□□□□ -0.6
FAM49A-202ENST00000406434 SPATA31D3P0C874 917 aa11.28□□□□□ -0.6
FAM49A-202ENST00000406434 CXCL8P10145 99 aa11.28□□□□□ -0.6
FAM49A-202ENST00000406434 SCP2P22307 547 aa11.28□□□□□ -0.6
FAM49A-202ENST00000406434 ABCD1P33897 745 aa11.28□□□□□ -0.6
FAM49A-202ENST00000406434 TNFSF9P41273 254 aa11.28□□□□□ -0.6
FAM49A-202ENST00000406434 KRT85P78386 507 aa11.28□□□□□ -0.6
FAM49A-202ENST00000406434 AMPD3Q01432 767 aa11.28□□□□□ -0.6
FAM49A-202ENST00000406434 DSG1Q02413 1049 aa11.28□□□□□ -0.6
FAM49A-202ENST00000406434 SOX4Q06945 474 aaPredicted RBP11.28□□□□□ -0.6
FAM49A-202ENST00000406434 XKR4Q5GH76 650 aa11.28□□□□□ -0.6
FAM49A-202ENST00000406434 ZBTB41Q5SVQ8 909 aa11.28□□□□□ -0.6
FAM49A-202ENST00000406434 ADALQ6DHV7 355 aa11.28□□□□□ -0.6
FAM49A-202ENST00000406434 SLC39A4Q6P5W5 647 aa11.28□□□□□ -0.6
FAM49A-202ENST00000406434 PRSS55Q6UWB4 352 aaPredicted RBP11.28□□□□□ -0.6
FAM49A-202ENST00000406434 SPATA31D4Q6ZUB0 917 aa11.28□□□□□ -0.6
FAM49A-202ENST00000406434 ADHFE1Q8IWW8 467 aa11.28□□□□□ -0.6
FAM49A-202ENST00000406434 CCDC65Q8IXS2 484 aa11.28□□□□□ -0.6
FAM49A-202ENST00000406434 SYCP3Q8IZU3 236 aa11.28□□□□□ -0.6
FAM49A-202ENST00000406434 RPGRIP1Q96KN7 1286 aa11.28□□□□□ -0.6
FAM49A-202ENST00000406434 SPATA32Q96LK8 384 aa11.28□□□□□ -0.6
FAM49A-202ENST00000406434 FBXL18Q96ME1 805 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms